LOCUS Contig438.n 5741 bp dna linear UNK ACCESSION unknown FEATURES Location/Qualifiers source 1..5741 /mol_type="genomic DNA" RBS 617..616 /gene="0438.0002" gene 631..1149 /locus_tag="0002" /gene="0438.0002" CDS 631..1149 /locus_tag="0002" /function="T - Signal transduction mechanisms" /gene="0438.0002" /translation="VLNDSRHKSGETLSLLQELNLSPERVVFELTERQAVQDYVGFEK VLSHYREQGFRIAVDDAGSGYNSLKTLVYLKPEFIKLDKFLIRGIHSNREQQELLELI SEYASRSATRVIAEGIETEEELLYLQMASIEFGQGYALGRPGYLPEPGAFPSDSPQVS AGGGCKHVSSDR*" /product="EAL domain/GGDEF domain protein" /note="VALIDATION:valid|FRAMESHIFT:no" RBS 1116..1120 /gene="0438.0003" gene 1130..2095 /locus_tag="0003" /gene="0438.0003" CDS 1130..2095 /locus_tag="0003" /function="T - Signal transduction mechanisms" /gene="0438.0003" /translation="MFLQIGEIAEQIPEISIHHKCAYVDHIFKSNPRLQGVAVTDNGQ PVALIMRIRFYQQIGTLYGFTLYMGRSIELIMDGSPLVVEYKTPITEVSKLAMDRSEE HLYDYVLVTREGVMFGAVSVRDLLLNFAEIQAVAASFLNPLTGLPGNLSINEWMVKSL LQEQFSVLYIDLDHFKAYNDTYGFKEGDRMLQATAEILKHCTLRLEGFLGHIGGDDFI IFIDDYRYEEYCRTIIAEFDRILQGFYHPGHLMQQHVLTESRSGVVEEIPLVSISIAV VTNRYRHFDSIEDLSGEAARLKKKSKMIRGSSFVDDRDLSASKSG*" /product="Possible signal transduction protein (containing EAL, CBS and GGDEF domains)" /note="VALIDATION:valid|FRAMESHIFT:no" RBS 2656..2660 /gene="0438.0005" gene 2663..3610 /locus_tag="0005" /gene="0438.0005" CDS 2663..3610 /locus_tag="0005" /function="K - Transcription" /gene="0438.0005" /translation="MRRWLHVFFEFYEGVLRMNFHQLHIFYTVSERGSFSAAAQTLHM TQPAVTMQVQALEDYFGAKLFDRSSKKIMLSEAGRTLLPFALRSIQLMRETDQAMAAF THMLEGRLLLGASLTIGEYVLPRLLGPFGKAYPHISIMMKVMNTSQLLEEIHKHQLNF GLIEAPVSHPDMVIEPVMGDELKLIVPREHPLAGKDEVTLAEALEHPFVLREQGSGTR RVMEEQLLAKGLDPGAMRVVMELGSTGAVKSAVEAGLGITIISTSSVKHEVALGLLKI VNIADASFKRQFYAIHLKSTLLPISAGGVXXXXXXXXFA*" /product="transcriptional regulator, LysR" /note="VALIDATION:valid|FRAMESHIFT:no" gene 3964..5457 /locus_tag="0006" /gene="0438.0006" CDS 3964..5457 /locus_tag="0006" /function="R - General function prediction only" /gene="0438.0006" /translation="MAVLLKGEKVTLRDLTEEDIRTLYYYEFEAEDREHLLWNGPYGT QEWESYETFAPKFAEILALTYTGEPRSRLVVEIDGQLKGTVGRYWVSKVTNWFEIGIV LFDSRDWSGGYGTEAFRMWMGYLFDSLDTVRLGIGTWSGNVRMMGLAAKCGMIEEARV RKARIVRGEYYDAIKMGILREEWEAAQGLNTKGRVEPMEPKGRNSSLKDQAGGGFAGR ADLHTHTLASDGMQSPAENVRLAHEKGLAAVAITDHDTVAGVAEALEAGRKYGITVVP GVEISTRAGGKEIHVLGYYMDTQQELFLSRLAEQRDTRAQRNEAIIAKLQALGIAITM DQVTAGIGRELKPDESVGRPHIADELVRLGAAVDMRDAFDKYLAEGAAAFVSPPRITP ELACEWIAEAGGAAVLAHPGIYGDDELVRSIIERSALRGIEAYHSDHSPADAERYLAL AEEFGLLVTGGSDFHGARQGVVFHGEIGSVSVPVGVLEQLRDKPKLH*" /product="PHP domain protein" /note="VALIDATION:valid|FRAMESHIFT:no" ORIGIN 1 atatgtgacg aaaggaataa aggttcattt cacacaatta taaaaaacgg gggaattcct 61 gatagtgatt ttatcgagga agacggaacc gtattgaaaa gattctggat tgtaacaaat 121 taattcaact aactggaaac gttagtttcc agtctaatac tttattttct tctgacactt 181 gcgctatatg ctggcaagag agtgacaaaa ttcacgagga aaagcatgca ggtgacctaa 241 tgacaaaacg aaagacatgg acacaaaagc tattggcagc tccccgctat cttcagcaca 301 tccatggaag gctgaggaac gaaatgaagg agctgggaag actgtcggcg ctcctggata 361 ttatggagca ggggcggctg gatacatttt ttcagccgat tctgcagctg ggaaacggac 421 ggacgatggg tcacgaagtg ctgaacagac ctccccattc cgcacagttt ccgactacgg 481 agcatttcta tgaatttgcc ggccgaacgg accagatgtt cagattcgaa cactactgcc 541 ggcggatttc gctctcgcgg tatatggaac gcctgcccga tgctgaatcg gggacagacc 601 ggcttgtatt tatcnnnnnn nnnnccgggc gtgctgaacg attccaggca taaaagcgga 661 gagacgctca gtctcctgca ggagctgaat ctttccccgg aacgtgtggt gtttgagctt 721 accgaacgtc aggcggtgca ggattatgtc ggctttgaga aggtgctctc ccattaccgc 781 gagcagggtt tccgtattgc cgtggacgac gcgggctccg gctataacag tctcaagact 841 ctggtatatt tgaagccgga attcatcaag ctggacaagt tcctgatccg cggaattcac 901 agcaaccggg agcagcagga gcttttggag ctgatcagcg agtatgccag ccgttctgcg 961 acccgggtca ttgccgaagg catcgaaacg gaggaggaac tgctgtattt gcagatggcc 1021 agtattgaat tcggccaggg ctatgcgctg ggaaggcccg gatatttgcc tgagccggga 1081 gcttttccat cggattcacc acaagtttct gccggaggag gctgcaagca tgtttcttca 1141 gatcggtgaa attgctgaac aaattcccga gatctccatt catcacaagt gcgcctatgt 1201 ggaccatatt tttaaaagca atccccggct gcagggtgtg gctgtgacag acaacgggca 1261 gccggtggcg ctgatcatga ggattcgctt ttatcagcag atcggtacgc tgtacgggtt 1321 cacgctgtac atgggccgct ccatcgaact gattatggat ggttcgccgc tggttgtaga 1381 gtacaaaacg ccgattacag aagtcagcaa gctggcgatg gaccggagtg aggagcatct 1441 ctatgattat gtgctggtca cccgtgaagg ggttatgttt ggggcggtga gcgtcaggga 1501 cctgctgctt aattttgccg agattcaggc ggtggccgca agctttttga acccgctgac 1561 cggcctgccg ggcaatctga gcattaacga atggatggta aaatcactgc tgcaggagca 1621 gttcagtgtg ctgtacatag acctcgatca ttttaaggca tacaacgata cctacggttt 1681 taaggaaggc gaccggatgc ttcaggccac ggcggagatt ctgaagcatt gcaccctgcg 1741 gctggagggc tttttggggc atatcggggg cgatgacttc attattttta tcgatgatta 1801 tcgttatgag gaatactgca ggaccattat agctgagttt gaccgaatcc tgcaggggtt 1861 ctatcatcct ggtcatttga tgcagcagca tgtgctgacc gagagccggt caggcgtagt 1921 agaggagatt ccgctggttt ccatctcgat cgccgttgta acgaaccgtt accgtcattt 1981 tgattccatt gaggacctct cgggcgaggc ggcaagactc aagaaaaaat ctaaaatgat 2041 cagaggcagc agctttgtgg atgacaggga tctctctgca agcaaatccg ggtgattccg 2101 gaagggggaa cgggcgtcat gcttgaacaa ccagcgtcaa tgcggtaata ttgacaacaa 2161 taagagcatg ccaagaccct ttcggtggag tgtgatgata atgcatggca aggggatgga 2221 aatgtggggg gtgtacgagc cctttcacat catgctgaat gaatacaggg tggctgatat 2281 tgttataacc ccgcatgcga gaagccgttt tgcagaccgg atgaataagg aagacggcat 2341 ggacgtggat atcggtgcat ggatatggca atgcgtgaag cagaaccggg taaggcctta 2401 ttcgcaaagt gaatataatg cttacctgat cgataacgac acctcggttg tggttgaatt 2461 caaggaactg gagggtgtaa ccacactctc cggacatccg ctgtatgtga tggttgtagt 2521 gacctttcta ggcaacattt ccgtcacacc gcagctgcgg gatctgaggg gctatttctc 2581 atggctgcac cattcccgcc gcatgaagca gatgaagaaa cgccgcagac gcaggtaaca 2641 cgcacacagt tgcagagaag gcatgcggcg atggctgcat gttttttttg aattttatga 2701 aggagttttg aggatgaatt ttcaccagct tcatatcttt tatacggttt ccgagcgcgg 2761 aagcttctcg gccgcagcac agacgctgca tatgacacag ccggcggtga cgatgcaggt 2821 ccaggcgctg gaggattatt tcggagccaa gctgtttgac cgttccagca aaaaaattat 2881 gctctccgag gccggccgca ccctgctgcc gtttgccctg cgcagcatcc agctgatgag 2941 ggagactgac caggcgatgg cggcttttac ccatatgctt gaagggcggc tgctgctggg 3001 agcgagcctg acgatcgggg aatatgtgct gccgcgtctg ctcggtccgt tcggcaaagc 3061 ttatccgcat atctccatca tgatgaaggt catgaatacc tcgcagctgc tggaggagat 3121 tcacaagcat cagctgaatt ttggcctgat cgaggcaccg gtgtctcatc cggatatggt 3181 gattgaaccg gtcatggggg atgagctgaa gctgatcgtg ccaagggagc atccgcttgc 3241 cgggaaggac gaggtaacgc ttgcggaggc gctggagcat ccttttgtac tccgtgagca 3301 gggttcggga acccgccggg ttatggaaga gcaactgctg gccaaagggc tggacccggg 3361 ggcgatgcgt gtggtgatgg agctgggaag cacgggagcc gtgaaatctg cggtagaggc 3421 agggctgggc ataaccatta tctctacgtc ttcggttaag catgaggttg ccctgggatt 3481 gctgaagatt gttaatattg cggatgcctc tttcaaaaga cagttttatg cgattcacct 3541 gaagtcgacg ctgctgccga tatcggcggg gggggtnnnn nnnnnnnnnn nnnnnnnnnn 3601 ttttgcgtga ccgtgcaggt gatctgtagg gaagctggca gttttgtgcc catggtatta 3661 tggaaaacgg atagctatat agagtgaann nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3901 nnnnnnnnnn nnnnnnnnnn nnnnnnngtt caacttttat agcttaacgg acgggggata 3961 ggtatggcgg ttttacttaa gggtgagaag gtaacgctga gagatctgac ggaagaggat 4021 atccgcaccc tatactatta tgagtttgaa gccgaggaca gggagcatct gctctggaat 4081 ggcccttacg gcacgcagga atgggaaagc tatgaaacgt ttgcacccaa atttgccgag 4141 attctggcgc tgacctatac cggtgagccc cgcagccgcc tggtggttga gattgacggt 4201 caactcaaag gaacggtagg ccggtattgg gtgtccaagg tcacgaattg gttcgagatc 4261 gggattgtgc tgtttgactc gcgtgattgg tcaggcgggt atggtaccga ggccttccgg 4321 atgtggatgg gatatctgtt tgattcgctg gatacggtcc ggcttggaat cggcacgtgg 4381 tcgggcaatg tccggatgat ggggctggcc gccaaatgcg gaatgatcga agaagcccgg 4441 gtacgcaagg cgcggattgt gcgcggggag tactacgatg ccattaagat gggaattctt 4501 cgtgaggaat gggaagcagc ccagggcttg aatacgaaag gcagggtgga accgatggaa 4561 ccaaagggca ggaatagcag tttaaaagat caggcgggcg gcggattcgc cggcagagcc 4621 gatttgcata cccatacgct ggcttcagac gggatgcagt ctccggcgga gaatgtgcgg 4681 ctggcccatg aaaaagggct tgcggcggtc gcaatcacgg atcatgatac cgtagccgga 4741 gtggctgaag cgcttgaagc ggggcggaaa tatggaatca ccgttgtacc cggagtagaa 4801 atcagcacac gcgccggcgg caaagagatc catgtgctgg ggtattacat ggacacgcag 4861 caggagctgt ttttatcccg gcttgctgag caaagggata cccgcgcgca gcggaacgaa 4921 gctattattg ccaagcttca ggcgctgggc atagctatta caatggatca agtcaccgcc 4981 gggattggcc gtgaactgaa gcctgatgag agcgtgggcc gtcctcatat tgccgatgaa 5041 ctggtgcgtc ttggcgccgc tgtggacatg cgcgacgcgt tcgacaagta tctggcagaa 5101 ggtgcggcgg cttttgtatc gccgccgcgc atcacgccgg agctggcctg cgaatggatt 5161 gctgaggccg gcggtgcggc ggtgctggca catcccggta tttacgggga tgatgagctg 5221 gtccgcagca taattgaacg cagcgcgctg cgcggcatcg aggcgtacca ttcagaccac 5281 agcccggctg atgcagagcg ttaccttgcg ctcgcggaag aattcgggct gctggtcacg 5341 ggcggctcgg atttccacgg tgcccgccag ggggttgtat tccacggcga gatcggcagc 5401 gtgtcggttc ctgttggcgt gctggagcag ctgcgggata agccgaagct gcactaaggt 5461 gcgggggagg cagaagcggc gccgggccgg gaaataaggg tagaaatacc cttgaatgag 5521 tcggaaacgg cgccgtgcca gaaatcaagg gtaaaaatac ccttgaatgg gcgcgagcgg 5581 tgcccgaagc accgctatat aaagaacctc cagccacgga tgctgttccg tccttggctg 5641 gaggttcttt tcattcaaat attaagaatt ttatatgctt cgcgtaaaaa attatccttc 5701 catttaattt atatgttttg ggagaagtga cttccccctt a //