BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0154.p (227 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DCK6.1 B1DCK6_9BACL Putative uncharacterized protein 304 4e-81 A6TPP2.1 A6TPP2_ALKMQ Putative uncharacterized protein 242 2e-62 A3DDD6.1 A3DDD6_CLOTH Putative uncharacterized protein 241 4e-62 B4BFU5.1 B4BFU5_CLOTM Putative uncharacterized protein 240 5e-62 C1I4V8.1 C1I4V8_9CLOT Putative uncharacterized protein 199 2e-49 >B1DCK6.1 B1DCK6_9BACL Putative uncharacterized protein Length = 226 Score = 304 bits (779), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 147/226 (65%), Positives = 175/226 (77%), Gaps = 1/226 (0%) Query: 1 MLDSIFSAALTSAELTFTDAVLTIFISIVLGGLISFTYMKTNPGGYSQSFTLTMXXXXXX 60 M+DS+FS + ELTF A+LT+ +S LG +ISFTYMKT Y+Q+F LTM Sbjct: 1 MIDSLFSTTASVTELTFGQAMLTLLLSFALGAMISFTYMKTQ-SVYTQNFALTMIVLPTI 59 Query: 61 XXXXXXXXGSNVARAFSLAGAFSIIRFRSAPGDPKDITFVLFTMASGLACGVGSFGYAAL 120 GSN+ARAFSLAGAFSIIRFRSAPGDPKDI FVLFTMASGLACGVG++GYA L Sbjct: 60 VAIIILLIGSNIARAFSLAGAFSIIRFRSAPGDPKDIAFVLFTMASGLACGVGAYGYAVL 119 Query: 121 FTLILCVLMFILNHTGFGARKSQQKTLKVTIPENLGYEEAFAEVFDTFNVRYELKKIRTT 180 FT++LC+LMF+L FG++ S QK LKVTIPENL YEEAF EVF+ +NV+YELKK+RTT Sbjct: 120 FTIVLCLLMFLLKAVKFGSKSSTQKLLKVTIPENLSYEEAFTEVFNIYNVQYELKKVRTT 179 Query: 181 ELGSLYELVYEVTIDEHTSQKELLDAVRTRNGNLDLSLTMCPPATD 226 ELGSLYELVY VT++ +QKELLDA+R RNGNLD+SLTM P + Sbjct: 180 ELGSLYELVYAVTLEPSLNQKELLDAIRCRNGNLDISLTMAPTGAE 225 >A6TPP2.1 A6TPP2_ALKMQ Putative uncharacterized protein Length = 228 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 158/221 (71%), Gaps = 1/221 (0%) Query: 1 MLDSIFSAALTSAELTFTDAVLTIFISIVLGGLISFTYMKT-NPGGYSQSFTLTMXXXXX 59 M ++IF ++ A+LTI +S VLGG++S TY +T YSQ+F+LT+ Sbjct: 1 MFETIFDTTTAQTTISLVTAMLTIMVSFVLGGMVSLTYRRTCEKSSYSQNFSLTLVLLSV 60 Query: 60 XXXXXXXXXGSNVARAFSLAGAFSIIRFRSAPGDPKDITFVLFTMASGLACGVGSFGYAA 119 GSNVARAFSLAGAFSIIRFRSAPGDPKDI +VLFTMA+GLACGVG +GY Sbjct: 61 VVAIIILLIGSNVARAFSLAGAFSIIRFRSAPGDPKDIAYVLFTMAAGLACGVGFYGYGV 120 Query: 120 LFTLILCVLMFILNHTGFGARKSQQKTLKVTIPENLGYEEAFAEVFDTFNVRYELKKIRT 179 LFT +LC+LM +LN FG + QK +K+T+PE+L +E AF EVF++F Y+L K++T Sbjct: 121 LFTTVLCLLMLVLNFINFGEQNFSQKMIKITVPEDLDFEGAFDEVFESFTDSYQLIKVKT 180 Query: 180 TELGSLYELVYEVTIDEHTSQKELLDAVRTRNGNLDLSLTM 220 +LGSLY++VY VT+D T+QKE LDA+R RNGNL+++L + Sbjct: 181 IDLGSLYQVVYMVTMDHKTNQKEFLDALRCRNGNLNITLAL 221 >A3DDD6.1 A3DDD6_CLOTH Putative uncharacterized protein Length = 227 Score = 241 bits (615), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 122/228 (53%), Positives = 156/228 (68%), Gaps = 2/228 (0%) Query: 1 MLDSIFSAALTSAELTFTDAVLTIFISIVLGGLISFTYMKTNPGGY-SQSFTLTMXXXXX 59 MLD +A + S LT A LTI +S LG LIS TYMKT+ GY SQ+FTLT+ Sbjct: 1 MLDIALNANINST-LTLGSAFLTIIVSFALGILISVTYMKTHVKGYYSQNFTLTLILIPA 59 Query: 60 XXXXXXXXXGSNVARAFSLAGAFSIIRFRSAPGDPKDITFVLFTMASGLACGVGSFGYAA 119 GSNVARAFSLAGAFSI RFRSA GDPKDI +VLF+MA+GLACG G FGYAA Sbjct: 60 VIAVIILLVGSNVARAFSLAGAFSIARFRSAAGDPKDIAYVLFSMAAGLACGTGLFGYAA 119 Query: 120 LFTLILCVLMFILNHTGFGARKSQQKTLKVTIPENLGYEEAFAEVFDTFNVRYELKKIRT 179 LFT++LCV M +L FGA+KS +K LK+ IPEN+ Y+ AF ++ + Y+L +++T Sbjct: 120 LFTMLLCVFMVVLCKINFGAKKSCEKILKILIPENMNYQGAFDDILKKYTTNYQLCRVKT 179 Query: 180 TELGSLYELVYEVTIDEHTSQKELLDAVRTRNGNLDLSLTMCPPATDY 227 T+LG+L+ELVY VT+D +KE +D +R RNGNL + L+M D+ Sbjct: 180 TDLGTLFELVYTVTMDNEKDEKEFIDELRCRNGNLSIVLSMNAAPNDF 227 >B4BFU5.1 B4BFU5_CLOTM Putative uncharacterized protein Length = 227 Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 122/228 (53%), Positives = 156/228 (68%), Gaps = 2/228 (0%) Query: 1 MLDSIFSAALTSAELTFTDAVLTIFISIVLGGLISFTYMKTNPGGY-SQSFTLTMXXXXX 59 MLD +A + S LT A LTI +S LG LIS TYMKT+ GY SQ+FTLT+ Sbjct: 1 MLDIALNANINST-LTLGSAFLTIIVSFALGILISVTYMKTHVKGYYSQNFTLTLILIPA 59 Query: 60 XXXXXXXXXGSNVARAFSLAGAFSIIRFRSAPGDPKDITFVLFTMASGLACGVGSFGYAA 119 GSNVARAFSLAGAFSI RFRSA GDPKDI +VLF+MA+GLACG G FGYAA Sbjct: 60 VIAVIILLVGSNVARAFSLAGAFSIARFRSAAGDPKDIAYVLFSMAAGLACGTGLFGYAA 119 Query: 120 LFTLILCVLMFILNHTGFGARKSQQKTLKVTIPENLGYEEAFAEVFDTFNVRYELKKIRT 179 LFT++LCV M +L FGA+KS +K LK+ IPEN+ Y+ AF ++ + Y+L +++T Sbjct: 120 LFTVLLCVFMVVLCKINFGAKKSCEKILKILIPENMNYQGAFDDILKKYTTNYQLCRVKT 179 Query: 180 TELGSLYELVYEVTIDEHTSQKELLDAVRTRNGNLDLSLTMCPPATDY 227 T+LG+L+ELVY VT+D +KE +D +R RNGNL + L+M D+ Sbjct: 180 TDLGTLFELVYTVTMDNEKDEKEFIDELRCRNGNLSIVLSMNAAPNDF 227 >C1I4V8.1 C1I4V8_9CLOT Putative uncharacterized protein Length = 229 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 2/219 (0%) Query: 1 MLDSIFSAALTSAELTFTDAVLTIFISIVLGGLISFTYMKTNPG-GYSQSFTLTMXXXXX 59 ML++I ++ T +A+ I SIVLG +IS YMKT+ GY+ FT+T+ Sbjct: 1 MLETIITST-NGESFTLFNALFIIISSIVLGLIISLAYMKTHKKEGYATGFTITLIMLPV 59 Query: 60 XXXXXXXXXGSNVARAFSLAGAFSIIRFRSAPGDPKDITFVLFTMASGLACGVGSFGYAA 119 G+NVARAFSLAGAFSIIRFRSAPGDPKDIT+V FT+A GL CG+G GYA Sbjct: 60 IIAIIILLVGNNVARAFSLAGAFSIIRFRSAPGDPKDITYVFFTLAVGLTCGMGYIGYAF 119 Query: 120 LFTLILCVLMFILNHTGFGARKSQQKTLKVTIPENLGYEEAFAEVFDTFNVRYELKKIRT 179 +FTLILC L IL+ T F K++ LK+TIPE+L Y+ F ++ + + + ++ I+T Sbjct: 120 IFTLILCALTLILDATKFAMPKTKTSKLKITIPEDLNYDGIFDDILNKYTNSWHIETIKT 179 Query: 180 TELGSLYELVYEVTIDEHTSQKELLDAVRTRNGNLDLSL 218 + GSL+E+ Y + I +QK+ +D +R +NGNL++SL Sbjct: 180 RDFGSLFEIHYIIHIKLDANQKKFIDELRCKNGNLNISL 218 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.137 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,144,036,343 Number of extensions: 41471230 Number of successful extensions: 113803 Number of sequences better than 1.0e-05: 113 Number of HSP's gapped: 113745 Number of HSP's successfully gapped: 113 Length of query: 227 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 96 Effective length of database: 1,826,543,238 Effective search space: 175348150848 Effective search space used: 175348150848 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 129 (54.3 bits)