BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0141.p (215 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3KZ69.1 C3KZ69_CLOB6 Chloramphenicol acetyltransferase EC=2.3.1.28 331 3e-89 B1QIC6.1 B1QIC6_CLOBO Glycerol-3-phosphate dehydrogenase 331 3e-89 A7GA11.1 A7GA11_CLOBL Streptogramin A acetyltransferase EC=2.3.1.- 330 7e-89 B1IE90.1 B1IE90_CLOBK Streptogramin A acetyltransferase EC=2.3.1.- 328 2e-88 Q57156.1 Q57156_STAAU VAT B 328 3e-88 >C3KZ69.1 C3KZ69_CLOB6 Chloramphenicol acetyltransferase EC=2.3.1.28 Length = 212 Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 151/211 (71%), Positives = 178/211 (84%) Query: 1 MHSTGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFI 60 M+ GP+PN+++PN NIK + +IKN + PNI GDY+YYDD + + FE+ VTHHYEFI Sbjct: 1 MNKFGPNPNSIYPNENIKSICYIKNVIKNPNIQVGDYTYYDDINGAEKFEAHVTHHYEFI 60 Query: 61 GDQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVI 120 D+LIIGKFCAIA+G EF+MNGANHRM S+TTYPFNIMGGGWEKA P L DLP KGDTV+ Sbjct: 61 DDKLIIGKFCAIAKGIEFVMNGANHRMKSITTYPFNIMGGGWEKAMPTLEDLPLKGDTVV 120 Query: 121 GNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALL 180 GNDVWIGQN T+MPGV IGDGSIIAANS VTKDVPPYHIAGGNP ++++KRFDDELI L Sbjct: 121 GNDVWIGQNVTVMPGVHIGDGSIIAANSVVTKDVPPYHIAGGNPCKIIKKRFDDELIDYL 180 Query: 181 LELKWWDWSKEKITANLDVLCSNDLERIKGL 211 L LKWWDWS+EKI NL+VLCS DL++IK + Sbjct: 181 LNLKWWDWSEEKIFKNLEVLCSPDLDKIKSI 211 >B1QIC6.1 B1QIC6_CLOBO Glycerol-3-phosphate dehydrogenase Length = 212 Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 151/211 (71%), Positives = 178/211 (84%) Query: 1 MHSTGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFI 60 M+ GP+PN+++PN NIK + +IKN + PNI GDY+YYDD + + FE+ VTHHYEFI Sbjct: 1 MNKFGPNPNSIYPNENIKSICYIKNVIKNPNIQVGDYTYYDDINGAEKFEAHVTHHYEFI 60 Query: 61 GDQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVI 120 D+LIIGKFCAIA+G EF+MNGANHRM S+TTYPFNIMGGGWEKA P L DLP KGDTV+ Sbjct: 61 DDKLIIGKFCAIAKGIEFVMNGANHRMKSITTYPFNIMGGGWEKAMPTLEDLPLKGDTVV 120 Query: 121 GNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALL 180 GNDVWIGQN T+MPGV IGDGSIIAANS VTKDVPPYHIAGGNP ++++KRFDDELI L Sbjct: 121 GNDVWIGQNVTVMPGVHIGDGSIIAANSVVTKDVPPYHIAGGNPCKIIKKRFDDELIDYL 180 Query: 181 LELKWWDWSKEKITANLDVLCSNDLERIKGL 211 L LKWWDWS+EKI NL+VLCS DL++IK + Sbjct: 181 LNLKWWDWSEEKIFKNLEVLCSPDLDKIKSI 211 >A7GA11.1 A7GA11_CLOBL Streptogramin A acetyltransferase EC=2.3.1.- Length = 212 Score = 330 bits (845), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 151/211 (71%), Positives = 177/211 (83%) Query: 1 MHSTGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFI 60 M+ GP+PN+++PN NIK + +IKN + PNI GDY+YYDD + + FE VTHHYEFI Sbjct: 1 MNKFGPNPNSIYPNENIKSICYIKNVIKNPNIQVGDYTYYDDINGAEKFEEHVTHHYEFI 60 Query: 61 GDQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVI 120 GD+LIIGKFCAIA+G EF+MNGANHRM S+TTYPFNIMGGGWEKA P L DLP KGDTV+ Sbjct: 61 GDKLIIGKFCAIAKGIEFVMNGANHRMKSITTYPFNIMGGGWEKAMPTLEDLPLKGDTVV 120 Query: 121 GNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALL 180 NDVWIGQN T+MPGV IGDGSIIAANS VTKDVPPYHIAGGNP ++++KRFDDELI L Sbjct: 121 DNDVWIGQNVTVMPGVHIGDGSIIAANSLVTKDVPPYHIAGGNPCKIIKKRFDDELIDYL 180 Query: 181 LELKWWDWSKEKITANLDVLCSNDLERIKGL 211 L LKWWDWS+EKI NL+VLCS DL++IK + Sbjct: 181 LNLKWWDWSEEKIFKNLEVLCSPDLDKIKSI 211 >B1IE90.1 B1IE90_CLOBK Streptogramin A acetyltransferase EC=2.3.1.- Length = 212 Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 150/211 (71%), Positives = 176/211 (83%) Query: 1 MHSTGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFI 60 M+ GP+PN+++PN NI + +IKN + PNI GDY+YYDD + + FE VTHHYEFI Sbjct: 1 MNKFGPNPNSIYPNENINSICYIKNVIKNPNIQVGDYTYYDDINGAEKFEEHVTHHYEFI 60 Query: 61 GDQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVI 120 GD+LIIGKFCAIA+G EF+MNGANHRM S+TTYPFNIMGGGWEKA P L DLP KGDTV+ Sbjct: 61 GDKLIIGKFCAIAKGIEFVMNGANHRMKSITTYPFNIMGGGWEKAMPTLEDLPLKGDTVV 120 Query: 121 GNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALL 180 NDVWIGQN T+MPGV IGDGSIIAANS VTKDVPPYHIAGGNP ++++KRFDDELI L Sbjct: 121 DNDVWIGQNVTVMPGVHIGDGSIIAANSVVTKDVPPYHIAGGNPCKIIKKRFDDELIDYL 180 Query: 181 LELKWWDWSKEKITANLDVLCSNDLERIKGL 211 L LKWWDWS+EKI NL+VLCS DL++IK + Sbjct: 181 LNLKWWDWSEEKIFKNLEVLCSPDLDKIKSI 211 >Q57156.1 Q57156_STAAU VAT B Length = 212 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 146/207 (70%), Positives = 176/207 (85%) Query: 5 GPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQL 64 GPDPN+++P+ IK V FIKNT+T PNII GDY+YY D + + FE VTHHYEF GD+L Sbjct: 4 GPDPNSIYPHEEIKSVCFIKNTITNPNIIVGDYTYYSDVNGAEKFEEHVTHHYEFRGDKL 63 Query: 65 IIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGNDV 124 +IGKFCAIA G EFIMNGANHRM S+TTYPFNIMG GWEKATP L DLP+KGDTV+GNDV Sbjct: 64 VIGKFCAIAEGIEFIMNGANHRMNSITTYPFNIMGNGWEKATPSLEDLPFKGDTVVGNDV 123 Query: 125 WIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLELK 184 WIGQN T+MPG+ IGDG+I+AANS VTKDVPPY I GGNP+R+++KRF+DELI LL++K Sbjct: 124 WIGQNVTVMPGIQIGDGAIVAANSVVTKDVPPYRIIGGNPSRIIKKRFEDELIDYLLQIK 183 Query: 185 WWDWSKEKITANLDVLCSNDLERIKGL 211 WWDWS +KI +NL+ LCS+DLE+IK + Sbjct: 184 WWDWSAQKIFSNLETLCSSDLEKIKSI 210 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.138 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,505,239,829 Number of extensions: 66106286 Number of successful extensions: 230675 Number of sequences better than 1.0e-05: 2934 Number of HSP's gapped: 229820 Number of HSP's successfully gapped: 2934 Length of query: 215 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 85 Effective length of database: 1,835,964,253 Effective search space: 156056961505 Effective search space used: 156056961505 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)