BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0135.p (189 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9YC31.1 B9YC31_9FIRM Putative uncharacterized protein 126 8e-28 B9Y7Q1.1 B9Y7Q1_9FIRM Putative uncharacterized protein 124 4e-27 C2C6Q5.1 C2C6Q5_VIBCH Putative uncharacterized protein 113 6e-24 A2PWZ6.1 A2PWZ6_VIBCH Phosphoglycerate mutase family protein, pu... 113 6e-24 A9NET9.1 A9NET9_ACHLI Phosphoglycerate mutase family protein EC=... 113 8e-24 >B9YC31.1 B9YC31_9FIRM Putative uncharacterized protein Length = 179 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 94/159 (59%) Query: 10 QFYLVRHGEPQWDINEHYKLKGHGRDLVPLTNKGINQVYLTAKDQRLKEAEIIVSSPYPR 69 + + VRHG P + + G G DL PL G +Q TA+D RLK+ ++IV+SP+ R Sbjct: 2 KIFFVRHGHPDYTEPKALGYPGFGNDLAPLDALGRSQAEQTARDPRLKQGQLIVASPFTR 61 Query: 70 ALQTAAILSKELGLEIMVEFDLREWQPDLTFEYDSLERLKELGDDYDANHGVYPPGINKL 129 ALQTAA+LS+ L LE+ VE L EW PDLT+ Y +E ++ ++DA +GV P + Sbjct: 62 ALQTAAVLSRRLDLELRVEVGLHEWLPDLTYLYTDVETVERARAEFDAMNGVAGPERKQR 121 Query: 130 WETKELLKNRMEKVIDKYLEFQKVIITGHGMAFRTLVGE 168 WET E ++ R E+ + +Y + +I+ HG+ + E Sbjct: 122 WETWEQMRTRAERALARYAGYDCLIVVCHGLLMQAFGAE 160 >B9Y7Q1.1 B9Y7Q1_9FIRM Putative uncharacterized protein Length = 192 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 95/157 (60%) Query: 11 FYLVRHGEPQWDINEHYKLKGHGRDLVPLTNKGINQVYLTAKDQRLKEAEIIVSSPYPRA 70 FYL+RHG + + +G G L PL+ KGI ++ +TA D RL +A +I+SSPY RA Sbjct: 2 FYLIRHGTADYTEKDTKIYQGFGNHLAPLSAKGILEIEMTAADPRLAQARLILSSPYTRA 61 Query: 71 LQTAAILSKELGLEIMVEFDLREWQPDLTFEYDSLERLKELGDDYDANHGVYPPGINKLW 130 LQ+AAILS+ L + + VE DL EW D T+ Y E+ + +++ +G+YPPG K W Sbjct: 62 LQSAAILSRCLQIPLQVETDLHEWLADQTYVYLPDEQAAQHYNEFQTCNGLYPPGEEKAW 121 Query: 131 ETKELLKNRMEKVIDKYLEFQKVIITGHGMAFRTLVG 167 E+ +++ RM +V Y +++ HG+ ++L G Sbjct: 122 ESLPVMRRRMIRVFQHYQGQGDLLVVCHGLVIQSLCG 158 >C2C6Q5.1 C2C6Q5_VIBCH Putative uncharacterized protein Length = 179 Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 4/157 (2%) Query: 13 LVRHGEPQWDINEHYKLKGHGRDLVPLTNKGINQVYLTAKDQRLKEAEIIVSSPYPRALQ 72 VRHG P + +++ K+ +D PL + I+++ A+D +L++AE+I+SSPY RALQ Sbjct: 5 FVRHGVPDYSLSDERKMSQLEKDYAPLNREYIDELKAIAQDIQLEKAEVIISSPYTRALQ 64 Query: 73 TAAILSKELGLEIMVEFDLREWQPDLTFEYDSLERLKELGDDYDAN--HGVYPPGINKLW 130 TA I++++LGLE+ VE DLREW+ DL Y LE +Y A+ + V P ++ + Sbjct: 65 TAEIINRKLGLELFVEHDLREWRADLEGGYVDLEERDRRWCEYRASFKNNVVPNNVS--Y 122 Query: 131 ETKELLKNRMEKVIDKYLEFQKVIITGHGMAFRTLVG 167 E+ L+NR E V+ +Y + KVI+ H F +L G Sbjct: 123 ESWAELRNRAENVLSRYTHYSKVIVVSHFNVFESLAG 159 >A2PWZ6.1 A2PWZ6_VIBCH Phosphoglycerate mutase family protein, putative Length = 179 Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 4/157 (2%) Query: 13 LVRHGEPQWDINEHYKLKGHGRDLVPLTNKGINQVYLTAKDQRLKEAEIIVSSPYPRALQ 72 VRHG P + +++ K+ +D PL + I+++ A+D +L++AE+I+SSPY RALQ Sbjct: 5 FVRHGVPDYSLSDERKMSQLEKDYAPLNREYIDELKAIAQDIQLEKAEVIISSPYTRALQ 64 Query: 73 TAAILSKELGLEIMVEFDLREWQPDLTFEYDSLERLKELGDDYDAN--HGVYPPGINKLW 130 TA I++++LGLE+ VE DLREW+ DL Y LE +Y A+ + V P ++ + Sbjct: 65 TAEIINRKLGLELFVEHDLREWRADLEGGYVDLEERDRRWCEYRASFKNNVVPNNVS--Y 122 Query: 131 ETKELLKNRMEKVIDKYLEFQKVIITGHGMAFRTLVG 167 E+ L+NR E V+ +Y + KVI+ H F +L G Sbjct: 123 ESWAELRNRAENVLSRYTHYSKVIVVSHFNVFESLAG 159 >A9NET9.1 A9NET9_ACHLI Phosphoglycerate mutase family protein EC=5.4.2.- Length = 175 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 1/153 (0%) Query: 8 MTQFYLVRHGEPQWDINEHYKLKGHGRDLVPLTNKGINQVYLTAKDQRLKEAEIIVSSPY 67 M +F L+RH EP++D + G G DL LT G Q +D+ L A+II+SSPY Sbjct: 1 MAKFILIRHAEPRYDEVDERGYFGMGHDLGRLTVNGEQQAEFRGQDETLLGADIIISSPY 60 Query: 68 PRALQTAAILSKELGLEIMVEFDLREWQPDLTFEYDSLERLKELGDDYDANHGVYPPGIN 127 RALQTAA +S+ ++++VE DL EW PD+T ++ ++ ++L +Y + G+ Sbjct: 61 TRALQTAATISRITNIKLVVENDLHEWMPDMTHKF-QIDDFRKLYQEYRDSKGIRNETTV 119 Query: 128 KLWETKELLKNRMEKVIDKYLEFQKVIITGHGM 160 WET E LK+R+ V+DKY KVI+ HG+ Sbjct: 120 YHWETYEHLKSRLFNVLDKYKHLDKVIVVCHGL 152 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.139 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,209,014,780 Number of extensions: 48842933 Number of successful extensions: 123717 Number of sequences better than 1.0e-05: 134 Number of HSP's gapped: 124214 Number of HSP's successfully gapped: 134 Length of query: 189 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 61 Effective length of database: 1,854,806,283 Effective search space: 113143183263 Effective search space used: 113143183263 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)