BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0115.p (192 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q08S81.1 Q08S81_STIAU Putative uncharacterized protein 112 2e-23 Q6MAV1.1 Q6MAV1_PARUW Putative uncharacterized protein 97 7e-19 Q487M7.1 Q487M7_COLP3 Putative uncharacterized protein 97 9e-19 A1WWR1.1 A1WWR1_HALHL Putative uncharacterized protein 90 1e-16 A0L7R7.1 A0L7R7_MAGSM Putative uncharacterized protein 88 3e-16 >Q08S81.1 Q08S81_STIAU Putative uncharacterized protein Length = 171 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 91/174 (52%), Gaps = 15/174 (8%) Query: 19 VMWIVVDTWRNGISPMPASKAVRLAVAGEVNRVPGY-GTIVEAGSGWGTLGLDIIRHCPG 77 ++ IV T R GISPMP S VR + + PG GT++E GSGWGTL + CP Sbjct: 1 MLSIVFFTLRTGISPMPTSAKVRRELLALIP--PGLEGTVLELGSGWGTLAFALADACPR 58 Query: 78 KRLTGIENSSLPLWGSQLLALIAARLQHSGNGREPLQGRLRFIRGNIYRGSYADADMVIC 137 ++ G E S LP S L +A R LR +R + SY A + +C Sbjct: 59 AQVVGFELSPLPYAFSWLRQRLAPRPN------------LRLVRQDFTNVSYEGASLAVC 106 Query: 138 YLFPGAMERLAVKFRQELPPGAVVISVFFALPDMQPVRTVTCRDTLQTKLYVYS 191 YLFP AM RLA K +ELPPGA ++S FAL P RT D +T +Y+Y+ Sbjct: 107 YLFPEAMRRLAPKLAEELPPGAFILSHTFALRGWTPSRTAVAADLYRTPIYLYA 160 >Q6MAV1.1 Q6MAV1_PARUW Putative uncharacterized protein Length = 182 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 19/187 (10%) Query: 6 IITWLLALA-VLLSVMWIVVDTWRNGISPMPASKAVRLAVAGEVNRVPGYGTIVEAGSGW 64 II +L +L +L+ + W ++ GI+P P S V+ ++ + + G +VE GSGW Sbjct: 3 IICFLFSLFFILIHIFWY---SYFYGITPTPTSLKVQKSMVALLPKQLN-GKVVELGSGW 58 Query: 65 GTLGLDIIRHCPGKRLTGIENSSLPLWGSQLL-ALIAARLQHSGNGREPLQGRLRFIRGN 123 G L + + R P K + E S +P + S+ LI + +++ R + Sbjct: 59 GNLTVALARSYPEKEIIAYEISPIPYYVSKFFFYLIGLK-------------KIKTYRKD 105 Query: 124 IYRGSYADADMVICYLFPGAMERLAVKFRQELPPGAVVISVFFALPDMQPVRTVTCRDTL 183 ++ ++ D+ ++ICYL+ AM++L +KF QEL G V+S FA+P +P++ +D Sbjct: 106 FFKCNFKDSGIIICYLYSNAMQKLKIKFEQELRAGTYVLSHTFAIPGWKPIQIYYAKDIY 165 Query: 184 QTKLYVY 190 +T +++Y Sbjct: 166 KTPIFLY 172 >Q487M7.1 Q487M7_COLP3 Putative uncharacterized protein Length = 185 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 13/169 (7%) Query: 22 IVVDTWRNGISPMPASKAVRLAVAGEVNRVPGYGTIVEAGSGWGTLGLDIIRHCPGKRLT 81 IV T + GISPMP+S ++ V++ G GTIV+ GSGWG + I + P +++ Sbjct: 23 IVYSTVKLGISPMPSSNKAYFSMMQLVDKT-GSGTIVDLGSGWGNFVIRIAKRYPQRQVV 81 Query: 82 GIENSSLPLWGSQLLALIAARLQHSGNGREPLQGRLRFIRGNIYRGSYADADMVICYLFP 141 G E S LP S + I L R N Y ++ A ++ICYLFP Sbjct: 82 GYELSFLPWLTSSCIKKILGL------------KNLTLHRKNFYLADFSKASVLICYLFP 129 Query: 142 GAMERLAVKFRQELPPGAVVISVFFALPDMQPVRTVTCRDTLQTKLYVY 190 AME+++ K + E + +IS FALP Q RT+ D ++ +Y+Y Sbjct: 130 EAMEKISHKLQVEKSNVSFLISNNFALPSWQAYRTIRLNDFYKSPVYLY 178 >A1WWR1.1 A1WWR1_HALHL Putative uncharacterized protein Length = 187 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 21/185 (11%) Query: 10 LLALAVLLSVMWIVVDTWRNGISPMPASKA----VRLAVAGEVNRVPGYGTIVEAGSGWG 65 L+ + L ++ IV T GISP+P+S+ VR A+ E+ GT+VEAGSGWG Sbjct: 6 LIFVVTLGGMLLIVGYTMVTGISPLPSSRLGHELVRAALPAELE-----GTVVEAGSGWG 60 Query: 66 TLGLDIIRHCPGKRLTGIENSSLPLWGSQLLALIAARLQHSGNGREPLQGRLRFIRGNIY 125 L + R CP R+ G E S LP W L A + L N + F R ++ Sbjct: 61 GLARSVGRRCPRARVIGYELSPLP-W---LFACVLQWLWPVPN--------VEFRRRDLR 108 Query: 126 RGSYADADMVICYLFPGAMERLAVKFRQELPPGAVVISVFFALPDMQPVRTVTCRDTLQT 185 R S +DA V+CYL A+ L ++R ELPPGA+V+S F +P +P L Sbjct: 109 RVSCSDAAAVVCYLHLEAIRELEPRWRAELPPGALVVSNTFRIPGWRPSAIYQPPVRLDA 168 Query: 186 KLYVY 190 +YVY Sbjct: 169 PVYVY 173 >A0L7R7.1 A0L7R7_MAGSM Putative uncharacterized protein Length = 191 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 13/170 (7%) Query: 22 IVVDTWRNGISPMPASKAVRLAVAGEVNRVPGYGTIVEAGSGWGTLGLDIIRHCPGKRLT 81 IV T R G PMP+++ +R +A + P G+I+E GSGWG L + H P R+ Sbjct: 26 IVWYTLRTGAPPMPSTRTMRRMLADLLPAYPS-GSIIELGSGWGGLAQQLALHYPQHRVF 84 Query: 82 GIENSSLPLWGSQLLALIAARLQHSGNGREPLQGRLRFIRGNIYRGSYADADMVICYLFP 141 G+E S LP W L + R N LRF+R + + +V+CYL P Sbjct: 85 GLELSPLP-W---LFSWAKRRALGPPN--------LRFVRCDFRDHPLHEVGLVVCYLNP 132 Query: 142 GAMERLAVKFRQELPPGAVVISVFFALPDMQPVRTVTCRDTLQTKLYVYS 191 M R+ RQ L A V+ + FALP +PV+T+ D T L++Y Sbjct: 133 EVMRRVEPWLRQGLAASAWVVCIGFALPGHKPVKTIKVPDMHATTLFLYQ 182 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.141 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,153,834,453 Number of extensions: 46535044 Number of successful extensions: 153309 Number of sequences better than 1.0e-05: 25 Number of HSP's gapped: 153303 Number of HSP's successfully gapped: 25 Length of query: 192 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 64 Effective length of database: 1,854,806,283 Effective search space: 118707602112 Effective search space used: 118707602112 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 127 (53.5 bits)