BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0113.p (572 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z9X1.1 C0Z9X1_BREBN Putative uncharacterized protein 577 e-162 Q8A449.1 Q8A449_BACTN Putative uncharacterized protein 379 e-103 C1S5K2.1 C1S5K2_9SPHI Putative glucan synthasis protein 355 5e-96 Q4KBE6.1 Q4KBE6_PSEF5 Putative uncharacterized protein 350 3e-94 Q11VT9.1 Q11VT9_CYTH3 Putative uncharacterized protein 309 7e-82 >C0Z9X1.1 C0Z9X1_BREBN Putative uncharacterized protein Length = 459 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 272/457 (59%), Positives = 341/457 (74%), Gaps = 2/457 (0%) Query: 1 VEENLLEQLAQWHEEDEFAKIVEAIMDIPEPDRDYVLIGQLGRALNNLDRYNEALEQLLS 60 +++ L+EQL +WHEEDE +IV+ ++ +PE +R+Y + +LGRA NNL Y+EAL QL Sbjct: 1 MDQVLIEQLNRWHEEDEQQRIVDLLLTVPEEEREYEAVSRLGRAYNNLGLYDEALNQLKK 60 Query: 61 IAEQGEQDPIWHYRVGYAYYYLKQYDQAVREFELADELEPGDEAVLQLLDWSXXXXXXXX 120 IAE G+QDPIWH+RVG+A Y+LK+Y++A F +D+LE G++ L WS Sbjct: 61 IAEAGQQDPIWHFRVGFALYHLKRYEEATEAFRTSDKLETGNQNTESWLKWSLQKAEKQQ 120 Query: 121 XXXXXXXXXXXXXX--XXXXXXXFDPREFVDFWEDSDYALESYVSEPPTDELIASVEQEL 178 F F DFW+DS+YA ++Y S PPTDELIAS+E+EL Sbjct: 121 RQELRMAAKRAAAVEGSASEEVPFSNMSFEDFWDDSEYAKKAYQSAPPTDELIASIEEEL 180 Query: 179 GYKLPAFYIEMMKQHNGGVPRDTCFPTEEGTSWAEDHVAITGIMGIGRDKTYSLCGDLGS 238 GYKLPA Y+ +MKQ NGG+P++TCFPTE+ TSWAE+H+AITGI+GIGR+K+YSLCGDLGS Sbjct: 181 GYKLPASYLALMKQQNGGIPKNTCFPTEDPTSWAENHIAITGILGIGREKSYSLCGDLGS 240 Query: 239 RFMIEEWGYPDIGVVFGDCPSAGHDVIMLDYRACGREGEPAVIHVDQEADYEITFLAKDF 298 +FMIE+WGYPDIGVV DCPSAGHDV+MLDYRACGR+GEP VIHVDQE+DYEITFLA++F Sbjct: 241 QFMIEDWGYPDIGVVICDCPSAGHDVVMLDYRACGRDGEPEVIHVDQESDYEITFLAENF 300 Query: 299 ESFVRGLVNEEVFDTSEEDKADDLRKVAHGAFSPLLAELCGKVTEIENIEGIIRKICTAI 358 E+F+RGLV+EE +DTSEEDK L KVAHG FS LL ELC V+E+E I+ IR ICT I Sbjct: 301 EAFIRGLVSEEEYDTSEEDKEVALYKVAHGKFSSLLEELCTPVSEVEQIDQKIRSICTRI 360 Query: 359 VEEKGHFSLHADERSTLMYDVQFWIYIKAYPDTNRGEYLEAYSKMIAFGGEFGTGGYAPA 418 VEEKG FS HADE S LMYDVQFW+Y K+YPDT R +YL Y KMIAFGGEFG GGYAP Sbjct: 361 VEEKGFFSFHADELSYLMYDVQFWLYTKSYPDTTREQYLAVYEKMIAFGGEFGQGGYAPG 420 Query: 419 FISDWLDDRIRSGMIVERGGALAFTDEAKEELLHKLK 455 +IS+WLD R G IV+ G + FTD+ E++ +L+ Sbjct: 421 WISEWLDRRKEEGRIVQENGHIRFTDQFASEVIQQLR 457 >Q8A449.1 Q8A449_BACTN Putative uncharacterized protein Length = 326 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/297 (61%), Positives = 219/297 (73%) Query: 155 DYALESYVSEPPTDELIASVEQELGYKLPAFYIEMMKQHNGGVPRDTCFPTEEGTSWAED 214 +YA+ Y+ PPT+E+I E+ELGYKLP YI +MKQHNGG+P + CFP +E TSWA+D Sbjct: 19 EYAMNEYIGAPPTEEMIEETERELGYKLPESYIWLMKQHNGGIPFNVCFPCDEPTSWADD 78 Query: 215 HVAITGIMGIGRDKTYSLCGDLGSRFMIEEWGYPDIGVVFGDCPSAGHDVIMLDYRACGR 274 HVAITGIMG+ +DK YSLCG LGSRFMIEEWGYPDIGV DCPS GHD+I LDYR CG Sbjct: 79 HVAITGIMGVDKDKIYSLCGQLGSRFMIEEWGYPDIGVAICDCPSVGHDMIFLDYRECGP 138 Query: 275 EGEPAVIHVDQEADYEITFLAKDFESFVRGLVNEEVFDTSEEDKADDLRKVAHGAFSPLL 334 +GEP V+HVDQE DY +TFLA +FE F+RGLVNEEVFDTSEED+ +L KV + AFSPLL Sbjct: 139 QGEPKVVHVDQEDDYYVTFLADNFEEFIRGLVNEEVFDTSEEDERMELEKVRNAAFSPLL 198 Query: 335 AELCGKVTEIENIEGIIRKICTAIVEEKGHFSLHADERSTLMYDVQFWIYIKAYPDTNRG 394 ++LC K + E IRKI IV +KG F+LHADERS L+YD+Q W+Y YPDT Sbjct: 199 SDLCAKCDHPVDTERWIRKISEEIVTDKGFFALHADERSYLLYDIQLWLYTNVYPDTTEE 258 Query: 395 EYLEAYSKMIAFGGEFGTGGYAPAFISDWLDDRIRSGMIVERGGALAFTDEAKEELL 451 +YL AY K+IA GEF TGGYA F++DWL R SGM+ G L+ KE LL Sbjct: 259 DYLSAYKKIIALDGEFSTGGYASDFVTDWLTRRKESGMVTCNDGILSMAAGTKEALL 315 >C1S5K2.1 C1S5K2_9SPHI Putative glucan synthasis protein Length = 318 Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 163/315 (51%), Positives = 227/315 (72%), Gaps = 3/315 (0%) Query: 142 FDPREFVDFWEDSDYALESYVSEPPTDELIASVEQELGYKLPAFYIEMMKQHNGGVPRDT 201 F + +FWEDS+YAL+ YV + P+DELIA++E+ELG+KLPA YIE+MK HNGG+P++T Sbjct: 3 FKDFDLSNFWEDSEYALQEYVGQAPSDELIANIEEELGFKLPASYIELMKLHNGGIPKNT 62 Query: 202 CFPTEEGTSWAEDHVAITGIMGIGRDKTYSLCGDLGSRFMIEEWGYPDIGVVFGDCPSAG 261 CFPT E TSWA+DH+AIT I+ IGR+K YSLCG+LGS+FMI++WGYPD GV DCPSAG Sbjct: 63 CFPTSENTSWADDHIAITAILSIGREKPYSLCGELGSQFMIDDWGYPDTGVYICDCPSAG 122 Query: 262 HDVIMLDYRACGREGEPAVIHVDQEADYEITFLAKDFESFVRGLVNEEVFDTSEEDKADD 321 HD++MLDY CG++GEP V+HVDQE+DY+ TFLAKDFE+F+RGLV+E+++DTS +D D Sbjct: 123 HDMVMLDYSKCGKDGEPEVVHVDQESDYKKTFLAKDFETFIRGLVSEDIYDTSAQDLIDT 182 Query: 322 LRKVAHGAFSPLLAELCGKVTEIENIEGIIRKICTAIVEEKGHFSLHADERSTLMYDVQF 381 L G FS L + K T I N + ++R + T + +EKG+F+LH D S L YDVQF Sbjct: 183 LESFKTGRFSDTLQQYFKKETAI-NFDSVLRNLFTELSKEKGYFALHGDPLSYLAYDVQF 241 Query: 382 WIYIKAYPDTNRGEYLEAYSKMIAFG-GEFGTGGYAPAFISDWLDDRIRSGMIVERGGAL 440 ++ ++ +++AY M+A G E TGGYA F DW D+R+ + IV+ G Sbjct: 242 YLLTLNKEIKSKAAFVKAYLPMVAMGNNEISTGGYAD-FFKDWFDERVGNKQIVQTAGNF 300 Query: 441 AFTDEAKEELLHKLK 455 F+++ K + +++ Sbjct: 301 EFSEDYKNQFFEQVR 315 >Q4KBE6.1 Q4KBE6_PSEF5 Putative uncharacterized protein Length = 345 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 167/306 (54%), Positives = 210/306 (68%), Gaps = 4/306 (1%) Query: 150 FWEDSDYALESYVSEPP-TDELIASVEQELGYKLPAFYIEMMKQHNGGVPRDTCFPTEEG 208 FW D A S +++PP + +IA ++ +LGY+LP Y+ M ++NGG P +CFPTE+G Sbjct: 29 FW---DRATSSKINQPPASPSVIAQLQAQLGYRLPLSYVAFMNRYNGGRPHLSCFPTEQG 85 Query: 209 TSWAEDHVAITGIMGIGRDKTYSLCGDLGSRFMIEEWGYPDIGVVFGDCPSAGHDVIMLD 268 TSWAEDH AI + IG D YSL G LGSRFMIEEWGYPD+GV DCPSAGHD++ LD Sbjct: 86 TSWAEDHCAIDSFLSIGCDGDYSLGGGLGSRFMIEEWGYPDLGVYICDCPSAGHDMVALD 145 Query: 269 YRACGREGEPAVIHVDQEADYEITFLAKDFESFVRGLVNEEVFDTSEEDKADDLRKVAHG 328 Y CG EGEP V+HVDQEADY +T LA DFE+FVRGLV+ EV+DTSE+D DDL KVAH Sbjct: 146 YSECGPEGEPRVVHVDQEADYAVTVLAADFEAFVRGLVSPEVYDTSEQDYLDDLDKVAHA 205 Query: 329 AFSPLLAELCGKVTEIENIEGIIRKICTAIVEEKGHFSLHADERSTLMYDVQFWIYIKAY 388 FSPLL EL G + + ++ +IR+I IV EK +F+LHAD S L+YD+QFW+Y Y Sbjct: 206 PFSPLLEELLGHFSAVPDLGPLIRQIALRIVHEKRYFALHADPLSQLLYDLQFWLYQNRY 265 Query: 389 PDTNRGEYLEAYSKMIAFGGEFGTGGYAPAFISDWLDDRIRSGMIVERGGALAFTDEAKE 448 P N+ YL Y MIAF FGTGGYAP FI DW +R+ G + + G A + Sbjct: 266 PVPNKEAYLLVYQDMIAFARGFGTGGYAPDFIRDWFRNRLAGGQLRQAAGGFALAPAYQA 325 Query: 449 ELLHKL 454 +LL +L Sbjct: 326 QLLEQL 331 >Q11VT9.1 Q11VT9_CYTH3 Putative uncharacterized protein Length = 323 Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 157/311 (50%), Positives = 208/311 (66%), Gaps = 8/311 (2%) Query: 150 FWEDSDYALESYVSEPPTDELIASVEQELGYKLPAFYIEMMKQHNGGVPRDTCFPTEEGT 209 FW+DS Y++E YV E PTD LI S+EQELGYKLPA YIE+MKQHNGG P + CFP E T Sbjct: 14 FWDDSAYSIEEYVEETPTDALIDSIEQELGYKLPASYIELMKQHNGGTPVNCCFPVTEET 73 Query: 210 SWAEDHVAITGIMGIGRDKTYSLCGDLGSRFMIEEWGYPDIGVVFGDCPSAGHDVIMLDY 269 S E HV I+GIMGIGR KTYSL G GSRFMI+EWGYPD G+ CPSAGH++I+LDY Sbjct: 74 SGTEYHVEISGIMGIGRSKTYSLGGSFGSRFMIDEWGYPDTGIYVCTCPSAGHEMILLDY 133 Query: 270 RACGREGEPAVIHVDQEADYEITFLAKDFESFVRGLVNEEVFDTSEEDKADDLRKVAHGA 329 CG +GEP V +VDQE +Y+ TFLAKDFE+F+RGLV+ +V+DTS +D L G Sbjct: 134 SICGPKGEPQVFYVDQEREYQKTFLAKDFETFIRGLVHADVYDTSAQDLISTLETFRTGN 193 Query: 330 FSPLLAELCGKVTEIENIEGIIRKICTAIVEEKGHFSLHADERSTLMYDVQFWIYIKAYP 389 FS +L K + N + ++R + T + EKG+F+LHADE S L YD+QF++ Sbjct: 194 FSEVLQAYIKKDLSV-NFDRVLRNLFTELTTEKGYFALHADELSYLSYDIQFYLLSINRK 252 Query: 390 DTNRGEYLEAYSKMIAFG-GEFGTGGYAPAFISDWLDDRIRSGMIVERGGALA---FTDE 445 ++ ++++ Y M+A TGGYA F DW D++I+S I + G L+ FT+ Sbjct: 253 IKSKEDFVKHYLPMVAMSDAGITTGGYA-NFFEDWFDEKIKSKEITK--GLLSGFLFTEI 309 Query: 446 AKEELLHKLKN 456 K++L ++K Sbjct: 310 YKQKLFERIKQ 320 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.138 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,547,901,061 Number of extensions: 157952944 Number of successful extensions: 369174 Number of sequences better than 1.0e-05: 145 Number of HSP's gapped: 369103 Number of HSP's successfully gapped: 161 Length of query: 572 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 431 Effective length of database: 1,732,333,088 Effective search space: 746635560928 Effective search space used: 746635560928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)