BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0087.p (374 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJX7.1 B3KJX7_9BACI Oxidoreductase domain protein 530 e-149 A3I7X5.1 A3I7X5_9BACI Oxidoreductase 400 e-109 Q5WL48.1 Q5WL48_BACSK Oxidoreductase 397 e-109 C4BEG1.1 C4BEG1_9MICO Predicted dehydrogenase 391 e-107 B7R6C3.1 B7R6C3_9THEO Oxidoreductase family, NAD-binding Rossman... 320 1e-85 >B3KJX7.1 B3KJX7_9BACI Oxidoreductase domain protein Length = 352 Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust. Identities = 246/352 (69%), Positives = 289/352 (82%) Query: 23 MDMIRIGVIGTGSISGMHLNAYRNNPQTVVYAVCDLNXXXXXXXXXXXXXXKVYTDYRAL 82 M I +GVIGTGSIS MHL +Y+ + + AVCDLN KVYTDY+ L Sbjct: 1 MKSINVGVIGTGSISAMHLQSYQKHANANLLAVCDLNEERAQRAAEKYGATKVYTDYKEL 60 Query: 83 LADSGVDAVSICTWNNSHAEISIAALKAGKHVLVEKPLCRTLXXXXXXXXXXXXSGKILQ 142 LAD +DAVSICTWNN+HAEISIAAL AGKHVLVEKPLCRT+ SGK+LQ Sbjct: 61 LADPEIDAVSICTWNNTHAEISIAALNAGKHVLVEKPLCRTVEEALQVQEAVKSSGKMLQ 120 Query: 143 VGFVRRYDANVQLLQKLAGAGEFGEIYYAKATTLRRLGNPGGWFSDIERSGGGPLIDIGV 202 VGFVRRYD N Q+L++ A GEFGEIY+AKA+++RRLGNPGGWFSDIERSGGGPLIDIGV Sbjct: 121 VGFVRRYDPNAQMLREFADKGEFGEIYFAKASSIRRLGNPGGWFSDIERSGGGPLIDIGV 180 Query: 203 HVIDLCWYLMGRPKPVSVSANTYRKLGNRANVENLSFYKAADYDAANNTVEDLANALIRF 262 HVIDLCWY+MGRPKPV+VSANTYRKLGNR+NV NLSFYKAADYDA NTVED+ANA+IRF Sbjct: 181 HVIDLCWYMMGRPKPVAVSANTYRKLGNRSNVRNLSFYKAADYDAEKNTVEDMANAMIRF 240 Query: 263 ENGASLLVDVSFTLHAKEDGRSVSLYGEKGGFEIDPETVIVSERANTIVNIYPQTDHKGF 322 ENGASLLVDVSFTLH+KE+ +SV LYG+KGGFEIDPE IV+E+ +TI+NI PQTD+KGF Sbjct: 241 ENGASLLVDVSFTLHSKENLQSVKLYGDKGGFEIDPEVSIVTEKHDTIINIQPQTDNKGF 300 Query: 323 DFNSAFQNEIDHFTHCVQSGSQPLSPVQDGVAIMRILSGIYDSAAKGEEVKL 374 DF++AFQ+E++HF C+++G+ PLSPV+DGV IM+IL GIY+SA KG EV L Sbjct: 301 DFDAAFQSEVNHFISCIENGTTPLSPVEDGVEIMKILCGIYESAEKGAEVLL 352 >A3I7X5.1 A3I7X5_9BACI Oxidoreductase Length = 352 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 192/350 (54%), Positives = 245/350 (70%) Query: 23 MDMIRIGVIGTGSISGMHLNAYRNNPQTVVYAVCDLNXXXXXXXXXXXXXXKVYTDYRAL 82 MD +++ VIGTGSIS HL +Y NP +Y V D + V++ AL Sbjct: 1 MDKLKVCVIGTGSISDYHLGSYMKNPSVELYGVYDTSIERGKAKAAQFGATHVFSSKEAL 60 Query: 83 LADSGVDAVSICTWNNSHAEISIAALKAGKHVLVEKPLCRTLXXXXXXXXXXXXSGKILQ 142 AD V+AVSICTWNN+HAE++I AL+ HVL+EKPL T K+ Q Sbjct: 61 FADKNVEAVSICTWNNTHAELAILALENDLHVLIEKPLSMTYAEALNIQKVAGKHRKVFQ 120 Query: 143 VGFVRRYDANVQLLQKLAGAGEFGEIYYAKATTLRRLGNPGGWFSDIERSGGGPLIDIGV 202 VG+VRR+ N ++L++ + G+IYYAKA+ LRRLGNPGGWF++I++SGGGPLID+GV Sbjct: 121 VGYVRRFATNTKVLKQFIDDNKLGDIYYAKASCLRRLGNPGGWFAEIDKSGGGPLIDLGV 180 Query: 203 HVIDLCWYLMGRPKPVSVSANTYRKLGNRANVENLSFYKAADYDAANNTVEDLANALIRF 262 HVID+CWYLMGRPK V+ +TY +LGNR ++E+LSFYKAADYDA NTVEDLANALI F Sbjct: 181 HVIDICWYLMGRPKVKRVTGHTYNQLGNRNHIEHLSFYKAADYDATKNTVEDLANALITF 240 Query: 263 ENGASLLVDVSFTLHAKEDGRSVSLYGEKGGFEIDPETVIVSERANTIVNIYPQTDHKGF 322 ENGASL+VDVS+TLHA +D S+ LYG GG E++PE IVSE NTI+NI+PQ + F Sbjct: 241 ENGASLMVDVSYTLHAIKDEMSIKLYGTNGGAELEPELKIVSEEHNTILNIHPQINDLSF 300 Query: 323 DFNSAFQNEIDHFTHCVQSGSQPLSPVQDGVAIMRILSGIYDSAAKGEEV 372 DF +AFQNEI+ F C ++PV+DGV IM+IL GIY SA +G+EV Sbjct: 301 DFVTAFQNEINTFVDCCLHQYDSVAPVEDGVEIMKILEGIYISARQGKEV 350 >Q5WL48.1 Q5WL48_BACSK Oxidoreductase Length = 349 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 184/349 (52%), Positives = 244/349 (69%) Query: 26 IRIGVIGTGSISGMHLNAYRNNPQTVVYAVCDLNXXXXXXXXXXXXXXKVYTDYRALLAD 85 +R+ VIG G+IS MH+ +Y N +Y +CD+N V+TD + AD Sbjct: 1 MRVAVIGLGTISDMHIKSYAANANAELYGLCDVNEGRAYEKAALYGVANVFTDADDVFAD 60 Query: 86 SGVDAVSICTWNNSHAEISIAALKAGKHVLVEKPLCRTLXXXXXXXXXXXXSGKILQVGF 145 VDAVSICTWN +HA++++AAL+AGKHVLVEKPL T+ + ILQVG+ Sbjct: 61 PNVDAVSICTWNKTHADLAVAALRAGKHVLVEKPLALTVAEAKKVQAAAQEANTILQVGY 120 Query: 146 VRRYDANVQLLQKLAGAGEFGEIYYAKATTLRRLGNPGGWFSDIERSGGGPLIDIGVHVI 205 VRR+ AN Q+L+ G+ G+IYYAKA+ LRR+GNPGGWFS+ E SGGGPLID+GVH+I Sbjct: 121 VRRFGANTQVLKAFIDNGKLGDIYYAKASLLRRVGNPGGWFSNKELSGGGPLIDLGVHII 180 Query: 206 DLCWYLMGRPKPVSVSANTYRKLGNRANVENLSFYKAADYDAANNTVEDLANALIRFENG 265 D CWYLMGRP V+ + Y KLGNR+N+E+LSFYK ADYDAA NTVEDLANALI FENG Sbjct: 181 DCCWYLMGRPNVERVTGHVYDKLGNRSNIEHLSFYKTADYDAATNTVEDLANALITFENG 240 Query: 266 ASLLVDVSFTLHAKEDGRSVSLYGEKGGFEIDPETVIVSERANTIVNIYPQTDHKGFDFN 325 +SL+VDVS++LH K+D S+ L+G KGG E++P +V+E NTI+NI PQ DH F F+ Sbjct: 241 SSLMVDVSYSLHTKKDHLSMQLFGTKGGAELEPALTLVAEEQNTILNIEPQLDHPTFHFD 300 Query: 326 SAFQNEIDHFTHCVQSGSQPLSPVQDGVAIMRILSGIYDSAAKGEEVKL 374 SAFQ ++D F +G+ +P +DG+A+M++L GIY S+ + + L Sbjct: 301 SAFQKQVDAFVEACLTGAPSPAPAEDGLALMKMLEGIYLSSERKRAISL 349 >C4BEG1.1 C4BEG1_9MICO Predicted dehydrogenase Length = 353 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 189/352 (53%), Positives = 240/352 (68%) Query: 23 MDMIRIGVIGTGSISGMHLNAYRNNPQTVVYAVCDLNXXXXXXXXXXXXXXKVYTDYRAL 82 M R+GVIG GSI+ HL+AY N + AV D+N + Y D L Sbjct: 1 MTTFRVGVIGAGSIAQSHLSAYAENADVELIAVADMNLERARAVADQYGAPRAYADPHEL 60 Query: 83 LADSGVDAVSICTWNNSHAEISIAALKAGKHVLVEKPLCRTLXXXXXXXXXXXXSGKILQ 142 LAD +D VSICTWNNSHA +IAA+KAGKHVLVEKP+ RTL S +++Q Sbjct: 61 LADPEIDGVSICTWNNSHANWAIAAVKAGKHVLVEKPIARTLAEAEEIQRTVEASDRVVQ 120 Query: 143 VGFVRRYDANVQLLQKLAGAGEFGEIYYAKATTLRRLGNPGGWFSDIERSGGGPLIDIGV 202 VGFVRR+ N Q+L+ AGE GE+YYAKA+ LRR+GNPGGWF+D E SGGGPL+DIG+ Sbjct: 121 VGFVRRHSPNCQVLKSFIDAGELGEVYYAKASCLRRVGNPGGWFADKEISGGGPLLDIGI 180 Query: 203 HVIDLCWYLMGRPKPVSVSANTYRKLGNRANVENLSFYKAADYDAANNTVEDLANALIRF 262 HV+DLCWYLMG PK VSVS NTY KLG+R NV + YKAADYD + NTVEDLANA+IRF Sbjct: 181 HVLDLCWYLMGSPKVVSVSGNTYDKLGSRGNVTTMPRYKAADYDPSKNTVEDLANAVIRF 240 Query: 263 ENGASLLVDVSFTLHAKEDGRSVSLYGEKGGFEIDPETVIVSERANTIVNIYPQTDHKGF 322 ENGASLL+D S++LHA +D VS+YGE+GG E++P I +E +++VNI PQ + F Sbjct: 241 ENGASLLLDCSYSLHATKDSIEVSVYGEQGGAELEPALHIATEMHDSVVNIEPQIASRTF 300 Query: 323 DFNSAFQNEIDHFTHCVQSGSQPLSPVQDGVAIMRILSGIYDSAAKGEEVKL 374 +F F +EI +F ++ ++P GV I+RIL IY+SA+ G EV+L Sbjct: 301 EFGVGFAHEIQNFVDTSLGRAESIAPAWHGVEIVRILEAIYESASTGREVEL 352 >B7R6C3.1 B7R6C3_9THEO Oxidoreductase family, NAD-binding Rossmann fold protein Length = 355 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 159/351 (45%), Positives = 217/351 (61%), Gaps = 1/351 (0%) Query: 22 VMDMIRIGVIGTGSISGMHLNAYRNNPQTVVYAVCDLNXXXXXXXXXXXXXXKVYTDYRA 81 ++ +I +IG GSIS +H+ AY+ V A CD+N YTDY Sbjct: 3 IVKKTKIAIIGNGSISHVHMAAYKKLSNVEVVANCDINEERAKEFAQKYGIPHYYTDYNE 62 Query: 82 LLADSGVDAVSICTWNNSHAEISIAALKAGKHVLVEKPLCRTLXXXXXXXXXXXXSGKIL 141 +L +D VSICTWNN HA +IAALKAG +VL EKPL + K+L Sbjct: 63 MLEKEELDGVSICTWNNVHAPATIAALKAGANVLCEKPLALNAKEAEEMVQTAKKNDKLL 122 Query: 142 QVGFVRRYDANVQLLQKLAGAGEFGEIYYAKATTLRRLGNPGGWFSDIERSGGGPLIDIG 201 VGFVRR+ N ++L+ G+ G+IYYAK LRR+GNPGGWFSD +RSGGGPLID+G Sbjct: 123 MVGFVRRFGLNTKVLKDRIDQGDLGQIYYAKTGVLRRVGNPGGWFSDKKRSGGGPLIDLG 182 Query: 202 VHVIDLCWYLMGRPKPVSVSANTYRKLGNRANVENLSFYKAADYDAANNTVEDLANALIR 261 VH+IDL YLMG+PK VSV +TY +G R+N++ + YK+ DY N+ VED A I+ Sbjct: 183 VHMIDLARYLMGKPKAVSVMGSTYDLVGARSNIKGIQQYKSVDYSDYND-VEDFAVGFIK 241 Query: 262 FENGASLLVDVSFTLHAKEDGRSVSLYGEKGGFEIDPETVIVSERANTIVNIYPQTDHKG 321 F+NGA+L+V+ S+ H K+D + LYG K G ++PE I +E+ N +V+ P D Sbjct: 242 FDNGATLVVETSWAQHIKKDYLYLELYGSKAGATMEPELEIYTEKNNYLVDEKPIIDSHF 301 Query: 322 FDFNSAFQNEIDHFTHCVQSGSQPLSPVQDGVAIMRILSGIYDSAAKGEEV 372 DF + F EI+HF C+Q+G+ +SP +DG+ +M+IL IY+SA G EV Sbjct: 302 IDFQTMFDKEIEHFIDCIQNGTPCISPGEDGLELMKILDAIYESAKTGHEV 352 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,079,223,230 Number of extensions: 84164888 Number of successful extensions: 178350 Number of sequences better than 1.0e-05: 3709 Number of HSP's gapped: 173912 Number of HSP's successfully gapped: 3712 Length of query: 374 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 237 Effective length of database: 1,770,017,148 Effective search space: 419494064076 Effective search space used: 419494064076 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)