BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0076.p (507 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DCE0.1 B1DCE0_9BACL Malate--quinone oxidoreductase EC=1.1.99.16 801 0.0 B7GG33.1 B7GG33_ANOFW Malate/quinone oxidoreductase 767 0.0 B4BKN9.1 B4BKN9_9BACI Malate--quinone oxidoreductase EC=1.1.99.16 765 0.0 A4IMR6.1 MQO_GEOTN Probable malate:quinone oxidoreductase EC=1.1... 765 0.0 B3K5H2.1 B3K5H2_9BACI Malate--quinone oxidoreductase EC=1.1.99.16 760 0.0 >B1DCE0.1 B1DCE0_9BACL Malate--quinone oxidoreductase EC=1.1.99.16 Length = 501 Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/493 (79%), Positives = 444/493 (90%) Query: 1 MSNRQKTDVILIGAGIMSATLGSLLKELVPDWKITVFERRAGAGEESSNEWNNAGTGHSS 60 MS + KTDVILIGAGIMSATLGSLLKEL P+W+ITVFERRA AGEESSNEWNNAGTGHSS Sbjct: 1 MSKQTKTDVILIGAGIMSATLGSLLKELKPEWEITVFERRATAGEESSNEWNNAGTGHSS 60 Query: 61 LCELNYTVEQPDGSIDISKAIKVNEEYQFSKQFWSYLVKSKRIQHPQDFIVPVPHMSFVQ 120 LCELNYT E+PDGSIDISKA+KVNEE+Q SKQFWSYLV S I++P+DF+VPVPHMSFVQ Sbjct: 61 LCELNYTTEKPDGSIDISKAVKVNEEFQVSKQFWSYLVNSNLIRNPRDFVVPVPHMSFVQ 120 Query: 121 GEADVTFLKKRFEALSQNPLFQGMEFSEDPEQLMEWIPLMMKDRRINQPIAATRIESGTD 180 GE DVTFLKKRF ALS NPLF+GMEFS+DP +L EWIPLMMKDR++N PIAATRIESGTD Sbjct: 121 GEKDVTFLKKRFAALSGNPLFEGMEFSDDPAKLAEWIPLMMKDRKVNTPIAATRIESGTD 180 Query: 181 VNFGALTRILFDHLQSNNTDIRYQHNVDDIKRAGDGSWDLKVRNLENGTTTRHSAKFVFI 240 VNFG+LTRILF+ L+ N DI Y HNVDDIKRA DG+W+LKVRNL++G++ R +AKFVFI Sbjct: 181 VNFGSLTRILFNQLKQQNVDINYNHNVDDIKRANDGTWELKVRNLQSGSSERINAKFVFI 240 Query: 241 GGGGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCQKPDIVAQHHAKVYGKAALGAPPMSVP 300 GGGGGSLHLLQKSGI EGKGIGGFPVSGLFMVC+KP++VAQH AKVYG+A +GAPPMSVP Sbjct: 241 GGGGGSLHLLQKSGIKEGKGIGGFPVSGLFMVCKKPEVVAQHRAKVYGQAPVGAPPMSVP 300 Query: 301 HLDTRVIDKKESLFFGPFAGFSPKFLKYGSVFDLITSVKPGNLTTMLAAGAKNLSLTKYL 360 HLDTRVID KESLFFGPFAGF+PKFLK+GS DLITSVKP NLT MLAAGAKN+SLT YL Sbjct: 301 HLDTRVIDNKESLFFGPFAGFTPKFLKFGSNMDLITSVKPHNLTNMLAAGAKNMSLTTYL 360 Query: 361 IGQVMLSKDQRIEALREFVPGAQSGDWDLVVAGQRVQIIKDTAAGKGTLQFGTEVISSAD 420 I Q+MLSK+QR+EALREF+P A+S DW+L+VAGQRVQIIK+T AGKGTLQFGTEVIS+AD Sbjct: 361 IKQLMLSKEQRMEALREFIPNAKSEDWELLVAGQRVQIIKETNAGKGTLQFGTEVISAAD 420 Query: 421 GSIAALLGASPGASTAVSVMLEVIGKCFPQQLKAWEPKIKEMIPAYGVTLMENPKLINEI 480 GSIAALLGASPGASTAVSVMLEVIGKCFPQ +K WEPKIKEMIP+YG L++NP+LI +I Sbjct: 421 GSIAALLGASPGASTAVSVMLEVIGKCFPQHIKEWEPKIKEMIPSYGTKLLQNPELIQQI 480 Query: 481 QKLTDRSLNLTSR 493 T+ +L L + Sbjct: 481 NATTNAALGLAGK 493 >B7GG33.1 B7GG33_ANOFW Malate/quinone oxidoreductase Length = 518 Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/490 (72%), Positives = 426/490 (86%), Gaps = 1/490 (0%) Query: 3 NRQKTDVILIGAGIMSATLGSLLKELVPDWKITVFERRAGAGEESSNEWNNAGTGHSSLC 62 ++ KTDVILIGAGIMSATLG+LLKEL P+W+ITVFER +ESSNEWNNAGTGH++LC Sbjct: 21 SKMKTDVILIGAGIMSATLGTLLKELAPEWEITVFERLDQPADESSNEWNNAGTGHAALC 80 Query: 63 ELNYTVEQPDGSIDISKAIKVNEEYQFSKQFWSYLVKSKRIQHPQDFIVPVPHMSFVQGE 122 ELNYTVE+ DGSID+SKAIK+NE++Q S QFWSYLV++K I++P+DF++P+PHMSFVQGE Sbjct: 81 ELNYTVEKADGSIDVSKAIKINEQFQESLQFWSYLVQNKHIRNPKDFVMPIPHMSFVQGE 140 Query: 123 ADVTFLKKRFEALSQNPLFQGMEFSEDPEQLMEWIPLMMKDRRINQPIAATRIESGTDVN 182 +V FLKKRFE + NPLF+GMEFS+DP++L EWIPLMM+DR + +PIAATRIE+GTDVN Sbjct: 141 ENVAFLKKRFEQMVHNPLFKGMEFSDDPQKLKEWIPLMMEDRIVTEPIAATRIETGTDVN 200 Query: 183 FGALTRILFDHLQSNNTDIRYQHNVDDIKRAGDGSWDLKVRNLENGTTTRHSAKFVFIGG 242 FGALTR+LF+HL+ + ++ Y+H+V+D+KR D W++KVRNL G H+AKFVFIG Sbjct: 201 FGALTRMLFEHLEHKHVNLYYKHHVEDMKRTSDNLWEVKVRNLTTGEVEIHTAKFVFIGA 260 Query: 243 GGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCQKPDIVAQHHAKVYGKAALGAPPMSVPHL 302 GGGSLHLLQKSGIPEGKGIGGFPVSGLFMVC PDI+AQHHAKVYGKA +GAPPMSVPHL Sbjct: 261 GGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCNNPDIIAQHHAKVYGKAKVGAPPMSVPHL 320 Query: 303 DTRVIDKKESLFFGPFAGFSPKFLKYGSVFDLITSVKPGNLTTMLAAGAKNLSLTKYLIG 362 DTR ID K+ L FGPFAGFSPKFLK GS+FDLITSVKP N+ TMLAAGAKN++LTKYLI Sbjct: 321 DTRFIDGKKMLLFGPFAGFSPKFLKNGSLFDLITSVKPHNVLTMLAAGAKNMALTKYLIE 380 Query: 363 QVMLSKDQRIEALREFVPGAQSGDWDLVVAGQRVQIIKDT-AAGKGTLQFGTEVISSADG 421 QVMLSK+QR+E LREF+P A+S DWD+++AGQRVQ+IKDT A GKGTLQFGTEV+++ DG Sbjct: 381 QVMLSKEQRMEELREFIPHAKSEDWDVIIAGQRVQVIKDTEAGGKGTLQFGTEVVAAHDG 440 Query: 422 SIAALLGASPGASTAVSVMLEVIGKCFPQQLKAWEPKIKEMIPAYGVTLMENPKLINEIQ 481 S+AALLGASPGASTAV VMLEVI KCFP ++K WE KIKEMIP+YGV+LM+N L+ ++Q Sbjct: 441 SVAALLGASPGASTAVHVMLEVIEKCFPNEMKQWEAKIKEMIPSYGVSLMKNEALLRDVQ 500 Query: 482 KLTDRSLNLT 491 L +L LT Sbjct: 501 TLAAETLGLT 510 >B4BKN9.1 B4BKN9_9BACI Malate--quinone oxidoreductase EC=1.1.99.16 Length = 501 Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/492 (72%), Positives = 424/492 (86%), Gaps = 2/492 (0%) Query: 1 MSNRQ-KTDVILIGAGIMSATLGSLLKELVPDWKITVFERRAGAGEESSNEWNNAGTGHS 59 M N+Q KTDVILIGAGIMSATLG+LLKEL P+W ITVFER AG ESSNEWNNAGTGH+ Sbjct: 1 MGNKQTKTDVILIGAGIMSATLGTLLKELAPEWDITVFERLEEAGVESSNEWNNAGTGHA 60 Query: 60 SLCELNYTVEQPDGSIDISKAIKVNEEYQFSKQFWSYLVKSKRIQHPQDFIVPVPHMSFV 119 +LCELNYTVE+PDGSIDISKAIK+NE++ S QFW+YLV S ++ P++FI P+PHMSFV Sbjct: 61 ALCELNYTVEKPDGSIDISKAIKINEQFYVSLQFWAYLVNSGVLRDPKEFIRPLPHMSFV 120 Query: 120 QGEADVTFLKKRFEALSQNPLFQGMEFSEDPEQLMEWIPLMMKDRRINQPIAATRIESGT 179 QGE +V FLKKR+E + NPLF+GMEFS+DP++L EWIPLMM++R +N+PIAATRIESGT Sbjct: 121 QGEDNVAFLKKRYETMVNNPLFKGMEFSDDPKKLAEWIPLMMENRVVNEPIAATRIESGT 180 Query: 180 DVNFGALTRILFDHLQSNNTDIRYQHNVDDIKRAGDGSWDLKVRNLENGTTTRHSAKFVF 239 DVNFGALTR LF+HL+ N +I Y+H+VDDIKR DG W+LKVR+L++G RH AKFVF Sbjct: 181 DVNFGALTRKLFEHLKRKNVEIHYRHHVDDIKRTSDGLWELKVRDLDSGAVERHVAKFVF 240 Query: 240 IGGGGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCQKPDIVAQHHAKVYGKAALGAPPMSV 299 IG GGGSLHLLQKSGIPEG+GIGGFPVSGLFMVC PD+V QHHAKVYGKA +GAPPMSV Sbjct: 241 IGAGGGSLHLLQKSGIPEGRGIGGFPVSGLFMVCNNPDVVEQHHAKVYGKAKVGAPPMSV 300 Query: 300 PHLDTRVIDKKESLFFGPFAGFSPKFLKYGSVFDLITSVKPGNLTTMLAAGAKNLSLTKY 359 PHLDTR I+ ++ L FGPFAGFSPKFLK GS+ DL TSVKP NL TMLAAG KN++LT Y Sbjct: 301 PHLDTRFINNQKMLLFGPFAGFSPKFLKNGSMLDLFTSVKPHNLLTMLAAGVKNMALTNY 360 Query: 360 LIGQVMLSKDQRIEALREFVPGAQSGDWDLVVAGQRVQIIKDT-AAGKGTLQFGTEVISS 418 LI QVMLSK+QR+E LREFVP A+S +WD++VAGQRVQ+IKDT A GKGTLQFGTEV+ + Sbjct: 361 LIQQVMLSKEQRMEELREFVPTAKSEEWDVIVAGQRVQVIKDTEAGGKGTLQFGTEVVHA 420 Query: 419 ADGSIAALLGASPGASTAVSVMLEVIGKCFPQQLKAWEPKIKEMIPAYGVTLMENPKLIN 478 ADGSIAALLGASPGASTAV VMLEVI KCFP+++K WEPK++EMIP+YGV+LM+N +L++ Sbjct: 421 ADGSIAALLGASPGASTAVHVMLEVITKCFPERMKEWEPKVREMIPSYGVSLMKNERLLH 480 Query: 479 EIQKLTDRSLNL 490 +IQ T L L Sbjct: 481 DIQAATAEMLGL 492 >A4IMR6.1 MQO_GEOTN Probable malate:quinone oxidoreductase EC=1.1.99.16 Length = 501 Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/492 (72%), Positives = 424/492 (86%), Gaps = 2/492 (0%) Query: 1 MSNRQ-KTDVILIGAGIMSATLGSLLKELVPDWKITVFERRAGAGEESSNEWNNAGTGHS 59 M N+Q KTDVILIGAGIMSATLG+LLKEL P+W ITVFER AG ESSNEWNNAGTGH+ Sbjct: 1 MGNKQTKTDVILIGAGIMSATLGTLLKELAPEWDITVFERLEEAGVESSNEWNNAGTGHA 60 Query: 60 SLCELNYTVEQPDGSIDISKAIKVNEEYQFSKQFWSYLVKSKRIQHPQDFIVPVPHMSFV 119 +LCELNYTVE+PDGSIDISKAIK+NE++ S QFW+YLV S ++ P++FI P+PHMSFV Sbjct: 61 ALCELNYTVEKPDGSIDISKAIKINEQFYVSLQFWAYLVNSGVLRDPKEFIRPLPHMSFV 120 Query: 120 QGEADVTFLKKRFEALSQNPLFQGMEFSEDPEQLMEWIPLMMKDRRINQPIAATRIESGT 179 QGE +V FLKKR+E + NPLF+GMEFS+DP++L EWIPLMM++R +N+PIAATRIESGT Sbjct: 121 QGEDNVAFLKKRYETMVNNPLFKGMEFSDDPKKLAEWIPLMMENRVVNEPIAATRIESGT 180 Query: 180 DVNFGALTRILFDHLQSNNTDIRYQHNVDDIKRAGDGSWDLKVRNLENGTTTRHSAKFVF 239 DVNFGALTR LF+HL+ N +I Y+H+VDDIKR DG W+LKVR+L++G RH AKFVF Sbjct: 181 DVNFGALTRKLFEHLKRKNVEIHYRHHVDDIKRTSDGLWELKVRDLDSGAVERHVAKFVF 240 Query: 240 IGGGGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCQKPDIVAQHHAKVYGKAALGAPPMSV 299 IG GGGSLHLLQKSGIPEG+GIGGFPVSGLFMVC PD+V QHHAKVYGKA +GAPPMSV Sbjct: 241 IGAGGGSLHLLQKSGIPEGRGIGGFPVSGLFMVCNNPDVVEQHHAKVYGKAKVGAPPMSV 300 Query: 300 PHLDTRVIDKKESLFFGPFAGFSPKFLKYGSVFDLITSVKPGNLTTMLAAGAKNLSLTKY 359 PHLDTR I+ ++ L FGPFAGFSPKFLK GS+ DL TSVKP NL TMLAAG KN++LT Y Sbjct: 301 PHLDTRFINNQKMLLFGPFAGFSPKFLKNGSMLDLFTSVKPHNLLTMLAAGVKNMALTNY 360 Query: 360 LIGQVMLSKDQRIEALREFVPGAQSGDWDLVVAGQRVQIIKDT-AAGKGTLQFGTEVISS 418 LI QVMLSK+QR+E LREFVP A+S +WD++VAGQRVQ+IKDT A GKGTLQFGTEV+ + Sbjct: 361 LIQQVMLSKEQRMEELREFVPTAKSEEWDVIVAGQRVQVIKDTEAGGKGTLQFGTEVVHA 420 Query: 419 ADGSIAALLGASPGASTAVSVMLEVIGKCFPQQLKAWEPKIKEMIPAYGVTLMENPKLIN 478 ADGSIAALLGASPGASTAV VMLEVI KCFP+++K WEPK++EMIP+YGV+LM+N +L++ Sbjct: 421 ADGSIAALLGASPGASTAVHVMLEVITKCFPERMKEWEPKVREMIPSYGVSLMKNERLLH 480 Query: 479 EIQKLTDRSLNL 490 ++Q T L L Sbjct: 481 DVQAATAEMLGL 492 >B3K5H2.1 B3K5H2_9BACI Malate--quinone oxidoreductase EC=1.1.99.16 Length = 499 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/495 (72%), Positives = 431/495 (87%), Gaps = 1/495 (0%) Query: 1 MSNR-QKTDVILIGAGIMSATLGSLLKELVPDWKITVFERRAGAGEESSNEWNNAGTGHS 59 MSN +KTDVILIGAG+MSATLG+LLKELVP+W+I VFE+ A AGEESSNEWNNAGTGHS Sbjct: 1 MSNMDKKTDVILIGAGVMSATLGALLKELVPEWEIKVFEKLASAGEESSNEWNNAGTGHS 60 Query: 60 SLCELNYTVEQPDGSIDISKAIKVNEEYQFSKQFWSYLVKSKRIQHPQDFIVPVPHMSFV 119 +LCELNYT E+PDGSIDISKAI +NE++Q S+QFWSYLV S I++PQDFI+P+PHMS V Sbjct: 61 ALCELNYTSEKPDGSIDISKAININEQFQVSRQFWSYLVSSNLIRNPQDFIMPIPHMSLV 120 Query: 120 QGEADVTFLKKRFEALSQNPLFQGMEFSEDPEQLMEWIPLMMKDRRINQPIAATRIESGT 179 QGE DV FLKKRFEALS +PLFQGME+SEDPEQL EWIPL+M+ R N+P+AAT+I+SGT Sbjct: 121 QGEKDVAFLKKRFEALSNHPLFQGMEYSEDPEQLKEWIPLIMEGRTSNEPLAATKIDSGT 180 Query: 180 DVNFGALTRILFDHLQSNNTDIRYQHNVDDIKRAGDGSWDLKVRNLENGTTTRHSAKFVF 239 D+NFGALTR+LF+HL++ + ++ Y+H+V DIKR DGSW +KV +++NG T H+AKFVF Sbjct: 181 DINFGALTRMLFEHLKNKDVEVNYKHSVKDIKRTPDGSWKVKVLDIDNGRTEFHTAKFVF 240 Query: 240 IGGGGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCQKPDIVAQHHAKVYGKAALGAPPMSV 299 IGGGGGSLHLLQK+GIPE K IGGFPVSGLFMVC+ ++VAQHHAKVYGKA +GAPPMSV Sbjct: 241 IGGGGGSLHLLQKTGIPESKHIGGFPVSGLFMVCKNQEVVAQHHAKVYGKAKVGAPPMSV 300 Query: 300 PHLDTRVIDKKESLFFGPFAGFSPKFLKYGSVFDLITSVKPGNLTTMLAAGAKNLSLTKY 359 PHLDTR ID +++L FGPFAGFSPKFLK GS FDLI SVKP N+ TMLAAG K ++LT+Y Sbjct: 301 PHLDTRYIDNQKALLFGPFAGFSPKFLKTGSNFDLIGSVKPNNVFTMLAAGVKEMALTRY 360 Query: 360 LIGQVMLSKDQRIEALREFVPGAQSGDWDLVVAGQRVQIIKDTAAGKGTLQFGTEVISSA 419 LI QV+LS ++R+E LREF+P A+S DW++VVAGQRVQ+IKDTA GKGTLQFGTEV+S+A Sbjct: 361 LIQQVVLSNEKRMEELREFIPNAKSEDWEIVVAGQRVQVIKDTANGKGTLQFGTEVVSAA 420 Query: 420 DGSIAALLGASPGASTAVSVMLEVIGKCFPQQLKAWEPKIKEMIPAYGVTLMENPKLINE 479 DGS+AALLGASPGASTAV VMLEV+ KCFPQQ+K WEPKIKEMIP+YG++L +NP L E Sbjct: 421 DGSVAALLGASPGASTAVHVMLEVLQKCFPQQMKEWEPKIKEMIPSYGMSLSKNPALFEE 480 Query: 480 IQKLTDRSLNLTSRA 494 IQ T +L L+ +A Sbjct: 481 IQDTTSETLGLSLKA 495 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,036,712,293 Number of extensions: 132144780 Number of successful extensions: 397518 Number of sequences better than 1.0e-05: 497 Number of HSP's gapped: 396588 Number of HSP's successfully gapped: 497 Length of query: 507 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 367 Effective length of database: 1,741,754,103 Effective search space: 639223755801 Effective search space used: 639223755801 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)