BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0071.p (179 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8E9.1 B3K8E9_9BACI Putative uncharacterized protein 255 1e-66 B1D999.1 B1D999_9BACL Putative uncharacterized protein 220 4e-56 C0ZKB0.1 C0ZKB0_BREBN Putative uncharacterized protein 198 1e-49 C2W4X0.1 C2W4X0_BACCE Putative uncharacterized protein 161 2e-38 C3B092.1 C3B092_BACMY Putative uncharacterized protein 156 6e-37 >B3K8E9.1 B3K8E9_9BACI Putative uncharacterized protein Length = 179 Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 122/176 (69%), Positives = 142/176 (80%) Query: 1 MNTTEALQRFEETANHYIQELDSFSMEQLKRQPAEDEWSLGQMYQHLINSALYMQLRNIE 60 MNT EALQRFEET Y+QELD FS+EQL+ +PAEDEWS+GQMYQHLI SALYM LRNI+ Sbjct: 1 MNTKEALQRFEETVKVYVQELDGFSVEQLRYKPAEDEWSIGQMYQHLIQSALYMHLRNID 60 Query: 61 QCLASSEDAAAPITVKTKEGTAIFDQGSFPPIRVHVPPSPQYTPGQPESKEQLIQGLYTV 120 QCL + DAAA KT+ G AIF+QGSFPPIR+ VPPSP YTP QP KEQLIQGL V Sbjct: 61 QCLNMNGDAAASPAGKTEVGAAIFEQGSFPPIRIQVPPSPHYTPEQPADKEQLIQGLNAV 120 Query: 121 IGRMKEILPQLEKGTMQNTVPHPRFGPLNAQEWFLLIEMHYRHHLLQMGRLTQFLE 176 + R+KE P+L + ++Q+TVPHPRFG L+AQEWFLLIEMHYRHH+ Q+ RL Q LE Sbjct: 121 LHRVKETEPKLGEASLQHTVPHPRFGGLHAQEWFLLIEMHYRHHIRQLNRLKQALE 176 >B1D999.1 B1D999_9BACL Putative uncharacterized protein Length = 179 Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 104/175 (59%), Positives = 127/175 (72%) Query: 2 NTTEALQRFEETANHYIQELDSFSMEQLKRQPAEDEWSLGQMYQHLINSALYMQLRNIEQ 61 NTTEALQ FE++ YI EL FS+EQL +P+E++WS+GQM HLI SA YM LRN++Q Sbjct: 3 NTTEALQAFEKSVERYIDELGQFSLEQLLAKPSEEDWSVGQMVVHLIRSAQYMHLRNVDQ 62 Query: 62 CLASSEDAAAPITVKTKEGTAIFDQGSFPPIRVHVPPSPQYTPGQPESKEQLIQGLYTVI 121 C+A SE VKT+ G A+F+ GSFPPIR+ VP SPQYTP QP++KEQLI GL V Sbjct: 63 CIAGSEAVLVGTGVKTENGKAVFELGSFPPIRIRVPASPQYTPQQPDNKEQLIAGLKDVA 122 Query: 122 GRMKEILPQLEKGTMQNTVPHPRFGPLNAQEWFLLIEMHYRHHLLQMGRLTQFLE 176 RM+ P L + ++TVPHP FG LNA EWFLL+EMHYRHH LQ+ RL FLE Sbjct: 123 ERMRSTEPTLNQAPPEHTVPHPNFGALNATEWFLLVEMHYRHHFLQLERLKAFLE 177 >C0ZKB0.1 C0ZKB0_BREBN Putative uncharacterized protein Length = 173 Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 92/171 (53%), Positives = 121/171 (70%) Query: 1 MNTTEALQRFEETANHYIQELDSFSMEQLKRQPAEDEWSLGQMYQHLINSALYMQLRNIE 60 MNT E + +FE+ NHY+ EL+ F+MEQL ++P+E+EWS+GQMY HLI SA Y L N+E Sbjct: 1 MNTKEIVTKFEDVTNHYLHELEGFTMEQLLQKPSEEEWSIGQMYLHLIQSARYFHLGNVE 60 Query: 61 QCLASSEDAAAPITVKTKEGTAIFDQGSFPPIRVHVPPSPQYTPGQPESKEQLIQGLYTV 120 +C K++ G IF QGSF P+RV VP SP+YTP QPESKEQL GL +V Sbjct: 61 KCRQGGPAVTEAGAQKSEIGQTIFAQGSFLPVRVKVPASPEYTPAQPESKEQLRDGLISV 120 Query: 121 IGRMKEILPQLEKGTMQNTVPHPRFGPLNAQEWFLLIEMHYRHHLLQMGRL 171 + +MKE+ P L++ + +TV HP FG L A+EWF ++EMHYRHHLLQ+ RL Sbjct: 121 LAQMKELEPTLDEIPVHHTVAHPAFGSLTAKEWFAVVEMHYRHHLLQLNRL 171 >C2W4X0.1 C2W4X0_BACCE Putative uncharacterized protein Length = 174 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/175 (47%), Positives = 110/175 (62%), Gaps = 4/175 (2%) Query: 1 MNTTEALQRFEETANHYIQELDSFSMEQLKRQPAEDEWSLGQMYQHLINSALYMQLRNIE 60 MNT L++FE+ A HY EL+++S+EQ + +P+EDEWSLGQMY HL+ +A MQL IE Sbjct: 1 MNTNVILKKFEDLAAHYTNELETYSLEQFREKPSEDEWSLGQMYNHLL-TASNMQLHAIE 59 Query: 61 QCLASSEDAAAPITVKTKEGTAIFDQGSFPPIRVHVPPSPQYTPGQPESKEQLIQGLYTV 120 C S +A KT+ G I+ GSFPPI++ VP P YTP P +KE + Q L + Sbjct: 60 TC---STHSATIDGKKTEAGEKIYALGSFPPIQIKVPNRPGYTPKNPTNKEPIQQALLQL 116 Query: 121 IGRMKEILPQLEKGTMQNTVPHPRFGPLNAQEWFLLIEMHYRHHLLQMGRLTQFL 175 + +MKEI P++ HP FG LNA EWF L+ MH+ HHL QM RL Q + Sbjct: 117 VEKMKEIEPRISSIPSNYKAEHPGFGYLNAAEWFQLVYMHFSHHLRQMERLKQHI 171 >C3B092.1 C3B092_BACMY Putative uncharacterized protein Length = 174 Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 80/175 (45%), Positives = 109/175 (62%), Gaps = 4/175 (2%) Query: 1 MNTTEALQRFEETANHYIQELDSFSMEQLKRQPAEDEWSLGQMYQHLINSALYMQLRNIE 60 MN L++FE +YI+EL+ +S+EQL+R+P+EDEWSLGQMY HL+ +A MQL I Sbjct: 1 MNPNAILEKFESVTMYYIKELEKYSLEQLRRKPSEDEWSLGQMYNHLL-TASNMQLDAIA 59 Query: 61 QCLASSEDAAAPITVKTKEGTAIFDQGSFPPIRVHVPPSPQYTPGQPESKEQLIQGLYTV 120 +C + D+A KT+ G ++ G+FPP+++ +P P YTP P KE++ Q L + Sbjct: 60 KC---TTDSATIDGKKTEMGEKVYAMGAFPPVQIKIPDRPGYTPENPTDKEEIKQALLQI 116 Query: 121 IGRMKEILPQLEKGTMQNTVPHPRFGPLNAQEWFLLIEMHYRHHLLQMGRLTQFL 175 I +MK I PQL V HP G LNA EWF LI MH+ HHL Q RL Q + Sbjct: 117 IEKMKGIEPQLPSILANYKVAHPGLGYLNAVEWFQLIYMHFSHHLHQKERLEQHI 171 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,066,846,710 Number of extensions: 42678211 Number of successful extensions: 114052 Number of sequences better than 1.0e-05: 53 Number of HSP's gapped: 114050 Number of HSP's successfully gapped: 53 Length of query: 179 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 52 Effective length of database: 1,864,227,298 Effective search space: 96939819496 Effective search space used: 96939819496 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)