BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0068.p (291 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A3IAE3.1 A3IAE3_9BACI 3-ketoacyl-(Acyl-carrier-protein) reductas... 457 e-127 C3GUI1.1 C3GUI1_BACTU Short chain dehydrogenase 450 e-125 B1HMS6.1 B1HMS6_LYSSC Versicolorin reductase EC=1.1.-.- 426 e-118 C0Z8M9.1 C0Z8M9_BREBN Putative oxidoreductase 385 e-105 B7IX60.1 B7IX60_BACC2 3-oxoacyl-[acyl-carrier-protein] reductase... 368 e-100 >A3IAE3.1 A3IAE3_9BACI 3-ketoacyl-(Acyl-carrier-protein) reductase EC=1.1.1.100 Length = 262 Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust. Identities = 219/260 (84%), Positives = 243/260 (93%) Query: 32 DKGDESMGRLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQS 91 ++GD SM +L G++AL+TG+SRGIGRSIALRLAQEGA++ VHYGKRR+EAEAVVHQI+QS Sbjct: 3 EQGDGSMSKLTGKIALVTGSSRGIGRSIALRLAQEGAFVVVHYGKRRNEAEAVVHQIKQS 62 Query: 92 GGNACVIGADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESF 151 GGNAC IGADL TLDGI++LF++LDD IRE GSGFDILVNNAGIGQ+++L+ETTEESF Sbjct: 63 GGNACAIGADLSTLDGIQNLFTTLDDTIREYMGGSGFDILVNNAGIGQIISLDETTEESF 122 Query: 152 DEVMRINVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLL 211 DEVM INVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVF YSMSKGAIDTFT+LL Sbjct: 123 DEVMNINVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFTYSMSKGAIDTFTRLL 182 Query: 212 AKQLGPRNITVNAIQPGIINTEMNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLA 271 AK+LG RNITVNAIQPGIINTEMNA TL+N EGQKYAAGLS FNRWGEPED+ADIAAFLA Sbjct: 183 AKELGSRNITVNAIQPGIINTEMNAETLENLEGQKYAAGLSIFNRWGEPEDVADIAAFLA 242 Query: 272 ARDSRWVTGQLLDASGGSHL 291 + DSRWVTGQLLDASGGSHL Sbjct: 243 SSDSRWVTGQLLDASGGSHL 262 >C3GUI1.1 C3GUI1_BACTU Short chain dehydrogenase Length = 262 Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust. Identities = 217/260 (83%), Positives = 239/260 (91%) Query: 32 DKGDESMGRLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQS 91 ++GD SM +L G++AL+TG+SRGIGRSIALRLAQEGA++ VHY KRR+EAEAVVHQI QS Sbjct: 3 EQGDGSMSKLAGKIALVTGSSRGIGRSIALRLAQEGAFVIVHYAKRRNEAEAVVHQIEQS 62 Query: 92 GGNACVIGADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESF 151 GNAC IGADL TLDGI+DLF++LDD IRE G GFDILVNNAGIGQ+++LEETT ESF Sbjct: 63 RGNACAIGADLSTLDGIQDLFTTLDDTIREYMGGDGFDILVNNAGIGQIISLEETTYESF 122 Query: 152 DEVMRINVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLL 211 DEVM+INVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVF YSMSKGAIDTFT+LL Sbjct: 123 DEVMKINVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFTYSMSKGAIDTFTRLL 182 Query: 212 AKQLGPRNITVNAIQPGIINTEMNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLA 271 AKQLG RNITVNAIQPGIINTEMNA TL+N +GQKYAAGLS FNRWGEPED+ADIAAFLA Sbjct: 183 AKQLGSRNITVNAIQPGIINTEMNAETLENLDGQKYAAGLSIFNRWGEPEDVADIAAFLA 242 Query: 272 ARDSRWVTGQLLDASGGSHL 291 + DSRWVTGQLLDASGGSHL Sbjct: 243 SSDSRWVTGQLLDASGGSHL 262 >B1HMS6.1 B1HMS6_LYSSC Versicolorin reductase EC=1.1.-.- Length = 262 Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/260 (83%), Positives = 241/260 (92%) Query: 32 DKGDESMGRLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQS 91 ++GD SM +L G++AL+TG+SRGIGRSIALRLAQEGA++ VHYGKRR+EAEAVVHQI QS Sbjct: 3 EQGDGSMSKLRGKIALVTGSSRGIGRSIALRLAQEGAFVIVHYGKRRNEAEAVVHQIEQS 62 Query: 92 GGNACVIGADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESF 151 GGNAC IGADL TLDGI+DLF++LDD IR G GFDILVNNAGIGQ+++LEETTEESF Sbjct: 63 GGNACAIGADLSTLDGIQDLFTTLDDTIRGYMGGVGFDILVNNAGIGQIMSLEETTEESF 122 Query: 152 DEVMRINVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLL 211 +EVM+INVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVF YSMSKGAIDTFT+LL Sbjct: 123 EEVMKINVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFTYSMSKGAIDTFTRLL 182 Query: 212 AKQLGPRNITVNAIQPGIINTEMNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLA 271 AKQLG R+ITVNAIQPGIINTEMNA TL+N +GQKYAAGLS FNRWGEPED+ADIAAFLA Sbjct: 183 AKQLGSRDITVNAIQPGIINTEMNAETLENLDGQKYAAGLSIFNRWGEPEDVADIAAFLA 242 Query: 272 ARDSRWVTGQLLDASGGSHL 291 + DSRWVTGQLLDASGGSHL Sbjct: 243 SSDSRWVTGQLLDASGGSHL 262 >C0Z8M9.1 C0Z8M9_BREBN Putative oxidoreductase Length = 255 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/255 (73%), Positives = 222/255 (87%), Gaps = 1/255 (0%) Query: 38 MGRLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACV 97 M L+ ++A++TGASRGIGRSIALRLAQ+GA +AVHYG+R+ EAEAVV +I ++GG A Sbjct: 1 MNNLKEKIAVVTGASRGIGRSIALRLAQDGALVAVHYGRRQEEAEAVVREIERAGGQAFA 60 Query: 98 IGADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRI 157 IG DL TLDGIRD ++ LD+ ++++T FDILVNNAGIGQ++TLEE TEESFDEVM I Sbjct: 61 IGTDLRTLDGIRDFYARLDETLQKRTGDHRFDILVNNAGIGQILTLEEATEESFDEVMNI 120 Query: 158 NVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGP 217 NVKAP F+ QQALPRL++ GRIIN+SSFVTRAASPSVF YS+SKGAI+T T LAKQLG Sbjct: 121 NVKAPFFMIQQALPRLREEGRIINLSSFVTRAASPSVFTYSISKGAINTMTLALAKQLGS 180 Query: 218 RNITVNAIQPGIINTEMNAGTLQ-NPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSR 276 R+ITVNAI PGIINT+MNAGTLQ NP+GQKYAAGLS FNRWGEP+D+ADIA+FLA+ DSR Sbjct: 181 RHITVNAILPGIINTDMNAGTLQNNPDGQKYAAGLSTFNRWGEPDDVADIASFLASSDSR 240 Query: 277 WVTGQLLDASGGSHL 291 WVTGQL+DASGGSHL Sbjct: 241 WVTGQLIDASGGSHL 255 >B7IX60.1 B7IX60_BACC2 3-oxoacyl-[acyl-carrier-protein] reductase EC=1.1.1.100 Length = 254 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/254 (69%), Positives = 210/254 (82%) Query: 38 MGRLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACV 97 M +L+G++AL+TGASRGIGRSIAL LA GA + VHY KR+ EAE+VV +I+Q GG+A Sbjct: 1 MNKLKGKIALVTGASRGIGRSIALHLAHAGALVVVHYSKRKEEAESVVDKIKQDGGSAFA 60 Query: 98 IGADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRI 157 I ADL T +GI +L+S +D +++ + FDILVNNAGIGQ++TLEE+TEESFDEVM I Sbjct: 61 IRADLSTFNGINNLYSMMDQSLQKYIGNTTFDILVNNAGIGQVLTLEESTEESFDEVMNI 120 Query: 158 NVKAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGP 217 NVKAP F+ Q+ALPRLKDGGRIINISSFVTR ASPSVF YS+SKGAI+T T LA+QLG Sbjct: 121 NVKAPFFIIQKALPRLKDGGRIINISSFVTRVASPSVFAYSISKGAINTLTHTLAQQLGV 180 Query: 218 RNITVNAIQPGIINTEMNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSRW 277 R ITVNAI PGIINTEMNA TL N +GQKYAAGLS FNRWGEP DIADI FL++ DSRW Sbjct: 181 RGITVNAILPGIINTEMNAETLGNQDGQKYAAGLSTFNRWGEPNDIADIVGFLSSSDSRW 240 Query: 278 VTGQLLDASGGSHL 291 +TG+L+DASGGS L Sbjct: 241 ITGELIDASGGSCL 254 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,641,012,651 Number of extensions: 65405702 Number of successful extensions: 309395 Number of sequences better than 1.0e-05: 31103 Number of HSP's gapped: 255472 Number of HSP's successfully gapped: 31188 Length of query: 291 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 157 Effective length of database: 1,798,280,193 Effective search space: 282329990301 Effective search space used: 282329990301 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)