BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0061.p (341 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZKG9.1 C0ZKG9_BREBN Putative uncharacterized protein 327 1e-87 A3IE08.1 A3IE08_9BACI Putative uncharacterized protein 278 4e-73 B9CUR9.1 B9CUR9_STACP M23/M37 peptidase domain protein 193 2e-47 C4WCV6.1 C4WCV6_STAWA M23/M37 peptidase domain protein 184 1e-44 B4SKR8.1 B4SKR8_STRM5 Peptidase M23 177 1e-42 >C0ZKG9.1 C0ZKG9_BREBN Putative uncharacterized protein Length = 328 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 156/333 (46%), Positives = 216/333 (64%), Gaps = 12/333 (3%) Query: 5 TMVLAVLLSACGGEKTMNQRPESSTASTQNAAQTKPDASPETGASGQQDIQPEDLAQALL 64 +++ A+LL+ C G+ P ++ + T+ TK Q E + QALL Sbjct: 7 SLIGAILLTGCTGQSEATAIPSTTESLTKKKEGTKTMTD-----------QAESIVQALL 55 Query: 65 SGNYSGIYKRFSPEFKQQISEAEVAEMGSDFIQGVTAFNPSTVMQLNGSEQRVWTSGAGD 124 G +Y++ SP FKQQ+S+ + E + F G+ ++N + +NGS W Sbjct: 56 HGKIGEVYEQTSPSFKQQVSKTQFVEGYTAFSSGLKSWNQHSHTSINGSYYGTWVDQDAK 115 Query: 125 KGIIAVFDDSGTILGLSITGLSTYPDSDNALTKTAMALPFQGEWLVFWGGSNVLNNYHYE 184 +G++ D+ G I G+ + L YPD+DNALTK A + PF GEW VFWGG NVL+NYHYE Sbjct: 116 RGLVLTTDEKGIITGVLLKPLQNYPDTDNALTKLAYSAPFTGEWYVFWGGQNVLSNYHYE 175 Query: 185 YASQRYAYDFVQAVNGFSYEGDPLRNESYHAYGQKITAPADGVVTEVVNDIPDNTPVGVM 244 SQRYAYD +Q +G SY+GDP +NESY A+GQ+I AP G V VV+D+ DN PVG M Sbjct: 176 VESQRYAYDLIQVKDGLSYKGDPAKNESYFAFGQEIHAPQAGTVVHVVHDLKDNVPVGTM 235 Query: 245 NEKEPAGNVVVIDHG-GEYSFLAHLKQGSVTVKKGDAVKAGDVIGKAGNSGNSSEPHLHY 303 N +EPAGNVV++DHG GE+S+ AHLK+GS VK GD V+ GD++G GNSGNSSEPHLHY Sbjct: 236 NAQEPAGNVVILDHGNGEFSYFAHLKEGSAKVKVGDRVEKGDLLGLCGNSGNSSEPHLHY 295 Query: 304 QVSDGADLFTSRSLNIRWKDNLHPLKGQTVALK 336 QVSDG DLF S+S+ ++W++ +P +G+++ K Sbjct: 296 QVSDGKDLFQSKSIRVQWENGWNPRQGESITAK 328 >A3IE08.1 A3IE08_9BACI Putative uncharacterized protein Length = 284 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 132/282 (46%), Positives = 184/282 (65%), Gaps = 2/282 (0%) Query: 54 IQPEDLAQALLSGNYSGIYKRFSPEFKQQISEAEVAEMGSDFIQGVTAFNPSTVMQL-NG 112 ++P+DL+ LLSGN+ +YK S F+ ++S + E+G +F + + F + + NG Sbjct: 2 MKPKDLSDVLLSGNFEKVYKHMSEYFQNEVSFKQFQELGEEFNKDIIKFILQSELPYDNG 61 Query: 113 SEQRVWTSGAGDKGIIAVFDDSGTILGLSITGLSTYPDSDNALTKTAMALPFQGEWLVFW 172 ++Q VWT +G KG+IAVFD+ I L + L+ Y ++D TKT LPF+ EW VFW Sbjct: 62 AKQYVWTDESGTKGMIAVFDEDYVIQALQLIPLAVYHETDENFTKTKFHLPFRDEWFVFW 121 Query: 173 GGSNVLNNYHYEYASQRYAYDFVQAVNGFSYEGDPLRNESYHAYGQKITAPADGVVTEVV 232 GG+N L NYHYEY +QRYAYDFV SYE DP NESY A+G++ APA+GVV + Sbjct: 122 GGTNKLVNYHYEYENQRYAYDFVIINENRSYESDPTLNESYFAFGKEYLAPAEGVVVSME 181 Query: 233 NDIPDNTPVGVMNEKEPAGNVVVIDHGG-EYSFLAHLKQGSVTVKKGDAVKAGDVIGKAG 291 N++ DN PVG NE++P GN V++DHG E+S+L H K S+ VKKGD VK GD++G G Sbjct: 182 NNVEDNEPVGTFNEQQPLGNYVILDHGNEEFSYLVHFKHQSIVVKKGDKVKQGDLLGLVG 241 Query: 292 NSGNSSEPHLHYQVSDGADLFTSRSLNIRWKDNLHPLKGQTV 333 NSGNSSEPH+H+ V+D D S+S+ I + ++G V Sbjct: 242 NSGNSSEPHIHFHVADSPDPMNSKSIRINFNGKRDLIQGNFV 283 >B9CUR9.1 B9CUR9_STACP M23/M37 peptidase domain protein Length = 279 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 107/265 (40%), Positives = 158/265 (59%), Gaps = 8/265 (3%) Query: 71 IYKRFSPEFKQQISEAEVAEMGSDFIQGVTAFNPSTVMQLNGSEQRVWTSGAGDKGIIAV 130 +Y+ FS FK+ IS+ + E +++ + S +++W + GI + Sbjct: 18 LYRMFSKSFKRSISKRVLKETLDLYMKYAKKHTLYVDIGNEKSGEKIWLDEYQNYGIFVL 77 Query: 131 FDDSGTILGLSITGLSTYPDSDNALTKTAMALPFQGEWLVFWGGSNVLNNYHYEYASQRY 190 ++ I L + L + D TK LP + EWL++WGG N L NYHY Y +QRY Sbjct: 78 LEND-VIYSLILKPLYYFKDK---WTKQTYDLPIKDEWLIYWGGDNELFNYHYNYETQRY 133 Query: 191 AYDFVQAVNGFS-YEGDPLRNESYHAYGQKITAPADGVVTEVVNDIPDNTPVGVMNEKEP 249 AYD V+ VNG + Y+G + +Y+++G + AP G V +VVN I DNTP G NE EP Sbjct: 134 AYDLVKLVNGKTMYDGGQFCS-NYYSFGANVVAPIYGEVVKVVNHINDNTP-GNTNESEP 191 Query: 250 AGNVVVIDHGG-EYSFLAHLKQGSVTVKKGDAVKAGDVIGKAGNSGNSSEPHLHYQVSDG 308 GN V++ HG EYS LAHLK+ S+TV +GD + A +V+G+ GNSGNS+EPHLH+QV + Sbjct: 192 YGNYVMLKHGDHEYSVLAHLKKHSITVHEGDLIYAQEVVGQCGNSGNSTEPHLHFQVMNA 251 Query: 309 ADLFTSRSLNIRWKDNLHPLKGQTV 333 DL +SL I++K +P+KG+ + Sbjct: 252 PDLENGQSLKIQFKYYNNPIKGEIL 276 >C4WCV6.1 C4WCV6_STAWA M23/M37 peptidase domain protein Length = 280 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 150/270 (55%), Gaps = 8/270 (2%) Query: 67 NYSGIYKRFSPEFKQQISEAEVAEMGSDFIQGVTAFNPSTVMQLNGSEQRVWTSGAGDKG 126 +Y +Y F+ E K+QIS+ + ++ D+ + + + VW + G Sbjct: 14 DYETLYSYFTKEMKKQISKKALKKLIQDYNRFAHQHKCFVDIVTEKYGENVWLDAFENYG 73 Query: 127 IIAVFDDSGTILGLSITGLSTYPDSDNALTKTAMALPFQGEWLVFWGGSNVLNNYHYEYA 186 + ++ G I L L + D LT PF EW V+WGG N L NYHY Sbjct: 74 V-SIHVTHGKISALLFKPLYYFKDKHTTLT---YQFPFNDEWFVYWGGDNELFNYHYPIE 129 Query: 187 SQRYAYDFVQAV--NGFSYEGDPLRNESYHAYGQKITAPADGVVTEVVNDIPDNTPVGVM 244 +QRYAYDF++ +G SY D +R + Y+AY + AP +GVV ++ N+I DN +G Sbjct: 130 TQRYAYDFIKINKDSGMSYFEDGMRCKHYYAYNTPVYAPLNGVVVDIENNIKDNR-IGQT 188 Query: 245 NEKEPAGNVVVIDHG-GEYSFLAHLKQGSVTVKKGDAVKAGDVIGKAGNSGNSSEPHLHY 303 N+++P GN V+I H E+S + HLKQ S+ V GD + +IG GNSGNSSEPH+H+ Sbjct: 189 NQRQPLGNYVMIKHSTNEFSLIGHLKQHSIKVNIGDEITDNVMIGLCGNSGNSSEPHIHF 248 Query: 304 QVSDGADLFTSRSLNIRWKDNLHPLKGQTV 333 QVS+ L +SL + +++N P+KG+T+ Sbjct: 249 QVSNQPSLLEGQSLKVNFENNRTPIKGETI 278 >B4SKR8.1 B4SKR8_STRM5 Peptidase M23 Length = 340 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/223 (43%), Positives = 128/223 (57%), Gaps = 17/223 (7%) Query: 127 IIAVFDDSGTILGLSITGLSTYPDSD------NALTKTAMALPFQGEWLVFWGGSNVLNN 180 ++ D G I G I L T P + T+T + LPF E+ VFWGG V N Sbjct: 110 VLWAIDADGRIGGFYIRPLQTTPPQAARSGFLDYQTRTRLQLPFNDEYYVFWGGRTVEQN 169 Query: 181 YHYEYASQRYAYDFVQAVNGFSYEGDPLRNESYHAYGQKITAPADGVVTEVVNDIPDNTP 240 YH +A QR+A D + +G S+ GD LRN+ Y+ +G+ I APADG V EV+ + DN P Sbjct: 170 YHAAHAGQRFALDLLVVRDGRSHRGDGLRNDDYYCFGRPILAPADGTVVEVIEGVADNVP 229 Query: 241 VGVMNEKEPAGNVVVIDHGGE-YSFLAHLKQGSVTVKKGDAVKAGDVIGKAGNSGNSSEP 299 G MN + GN V++DHG E YS LAHL+QGSV V +G AV++G +G GNSGNSSEP Sbjct: 230 -GQMNAAQLTGNRVILDHGNEEYSVLAHLRQGSVRVAQGQAVRSGAHLGDCGNSGNSSEP 288 Query: 300 HLHYQVSDGADLFTSRSLNIRWKDNL---------HPLKGQTV 333 HLHYQ+ G +L ++ D + P+KGQ + Sbjct: 289 HLHYQLQAGPVFGVGEALPAQFSDYIADGQPVARGEPVKGQRI 331 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.130 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,151,826,713 Number of extensions: 94931356 Number of successful extensions: 230234 Number of sequences better than 1.0e-05: 465 Number of HSP's gapped: 231055 Number of HSP's successfully gapped: 465 Length of query: 341 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 205 Effective length of database: 1,779,438,163 Effective search space: 364784823415 Effective search space used: 364784823415 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 131 (55.1 bits)