BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0060.p (700 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8G9.1 B3K8G9_9BACI Putative uncharacterized protein 1164 0.0 C3E5J3.1 C3E5J3_BACTU Putative uncharacterized protein 792 0.0 C2RQ89.1 C2RQ89_BACCE Putative uncharacterized protein 792 0.0 C3ILE1.1 C3ILE1_BACTU Putative uncharacterized protein 791 0.0 C3DV64.1 C3DV64_BACTS Putative uncharacterized protein 791 0.0 >B3K8G9.1 B3K8G9_9BACI Putative uncharacterized protein Length = 699 Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/699 (79%), Positives = 612/699 (87%) Query: 2 MINTIFLRRANKLIVDEGKGPDRLPRAYLATAAKNMETLGFTFSRPLMRALSTLPKEQFE 61 M+N+I+LRRANKL+VD DRLP+AYLATAAKN+E LG+TFS PL+ A+ L +EQFE Sbjct: 1 MMNSIYLRRANKLMVDAENESDRLPKAYLATAAKNIEQLGYTFSYPLLHAVRALSREQFE 60 Query: 62 ALYDQMIADLRAMVGAHVKYCPMYPAFPMQVMQADEAELYLNAFYYYLTLDLPEYAAADR 121 ALY +I DLR MVGAHVKY PMYPAFPMQVM +AELYLNA Y+YLT DLP Y +R Sbjct: 61 ALYQPLINDLRVMVGAHVKYEPMYPAFPMQVMGEADAELYLNAIYHYLTWDLPAYEHEER 120 Query: 122 PALQDQVNLKVIDLGSTAELHALISQLIQAKGSISETDKKDIDTVLEFADPEAMNEILPS 181 P LQD+VNLK IDLGS A +A+I QLIQAKGSIS TDK+DI+TV+E DPE ++ ILP Sbjct: 121 PPLQDEVNLKTIDLGSKAGFYAMIRQLIQAKGSISPTDKEDIETVIELLDPEELDVILPP 180 Query: 182 GIPFKENAGFVAASLLKHEKANVEQIGRYFTTATDVLRLAVAWSDGDVSLAEATXXXXXX 241 IPFKENAGFVAA+L+KH+K NVE+IGRYF TATDVLRLAVAWS GDVSLAEAT Sbjct: 181 EIPFKENAGFVAAALMKHDKGNVERIGRYFKTATDVLRLAVAWSGGDVSLAEATRFRKFK 240 Query: 242 XXXXXXXXXXXXXCHPITEDMLRYKERWIRLGEILHPSEYKHRYMRCEEAFDILRNNKPF 301 CHPITEDMLR+K+RWIRLGEILHPSEYKHRY RCEEAFDILRN+KPF Sbjct: 241 RRERRLLLGLLERCHPITEDMLRFKDRWIRLGEILHPSEYKHRYKRCEEAFDILRNHKPF 300 Query: 302 TTFNGSVELAFKYRQIWTLLDLLMQRPGEFARRLDQLLRSTEYTEYVVLAFGEVANQVST 361 TT+NGSVELAF+Y Q+W L+DLLMQRPGEFARRLDQLLRSTE+TEYVVLAFGEVANQVST Sbjct: 301 TTYNGSVELAFQYNQVWNLIDLLMQRPGEFARRLDQLLRSTEHTEYVVLAFGEVANQVST 360 Query: 362 PVLLQVKNHFARRHESHELRVFFPKGNVAKAFAVPDTLPEIDEAACQDLVQWCERVLMER 421 PVLLQV NHFARR E ELRVFFPKGNVAKAFAVP TLPEIDEAAC+D+VQ CE+VL++R Sbjct: 361 PVLLQVNNHFARRREPQELRVFFPKGNVAKAFAVPHTLPEIDEAACRDIVQVCEQVLVQR 420 Query: 422 FSLLPPLGKTYVDERLQDYHVPFSQRSASKALHTIVRGSRVPMMEGDTVRFFSWWKEGTV 481 F+ LPPLGK YVD+RL+DYHVPFS RSASKALHT+VRGSRVPM EGDT+RFFSWWKEG V Sbjct: 421 FASLPPLGKAYVDKRLKDYHVPFSHRSASKALHTLVRGSRVPMAEGDTIRFFSWWKEGRV 480 Query: 482 NGTPTGRVDIDLSAVLYDHNWQYVEHISYTNLRSSKYKAVHSGDIVSAPQGACEFIDLHI 541 NG PTGRVDIDLSAV+YDH+WQYVEHISYTNLRSS Y+AVHSGDIVSAPQGACEFIDLHI Sbjct: 481 NGEPTGRVDIDLSAVMYDHDWQYVEHISYTNLRSSHYRAVHSGDIVSAPQGACEFIDLHI 540 Query: 542 PSIVDYGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEPATVSNKIDVTADT 601 P+IV YGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEP+TV+NKIDV ADT Sbjct: 541 PTIVQYGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEPSTVANKIDVAADT 600 Query: 602 EIAVPVILDLVERRIIWTDLSLTRHPHYYNNVEGNQKGMVLIGKAMIDLRKPDLYDLFHL 661 +IA+PVILDLVER +IWTDLSLTRHPHYYNNVEGNQKGMVL+GKAM LRKPDLYDLF L Sbjct: 601 QIAIPVILDLVERTVIWTDLSLTRHPHYYNNVEGNQKGMVLMGKAMTALRKPDLYDLFML 660 Query: 662 HSKARGELVAAADQADTIFSVDTGVTPFDIERIMAEYVV 700 H+KARGE V A+QA+TIFSV+ GVTPFDIE IMA+YVV Sbjct: 661 HAKARGESVDHAEQAETIFSVEHGVTPFDIEHIMADYVV 699 >C3E5J3.1 C3E5J3_BACTU Putative uncharacterized protein Length = 703 Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/702 (54%), Positives = 503/702 (71%), Gaps = 8/702 (1%) Query: 2 MINTIFLRRANKLIVDEGKGPDRLPRAYLATAAKNMETLGFTFSRPLMRALSTLPKEQFE 61 M N+I++RR+ K+I+ + ++LP YLATA KN+E+LGFTFS PL+ L TL + F Sbjct: 1 MKNSIYIRRSLKVIIK--REENKLPNMYLATALKNLESLGFTFSEPLIEELQTLSVDAFT 58 Query: 62 ALYDQMIADLRAMVGAHVKYCPMYPAFPMQVMQADEAELYLNAFYYYLTLDLPEYAAADR 121 + Y +++ L+ MVGAH+++ PMYP FP Q+M +A+LY+NA +Y+TL LP +R Sbjct: 59 SFYKELVKHLKEMVGAHIQFTPMYPNFPQQMMDLSDADLYINAVIHYVTLRLPVSKVEER 118 Query: 122 PALQDQVNLKVIDLGSTAELHALISQLIQAKGSISETDKKDIDTVLEFADPEAMNEILPS 181 L D V+LKVIDLGS + + +ISQLI+A SIS TDK D++ + E ++ LP+ Sbjct: 119 LPLLDSVDLKVIDLGSEEDFNQMISQLIRANSSISSTDKTDVEWAI--THTEDVSCFLPN 176 Query: 182 GIPFKENAGFVAASLLKHEKANVEQIGRYFTTATDVLRLAVAWSDGDVSLAEATXXXXXX 241 IP KEN F+ LL + K + + +YF TATDVLRLAVA S+GDVSLA + Sbjct: 177 VIPHKENMSFIIGVLLINRKISADAAAKYFKTATDVLRLAVALSEGDVSLASSGRFKKFN 236 Query: 242 XXXXXXXXXXXXXCHPITEDMLRYKERWIRLGEILHPSEYKHRYMRCEEAFDILRNNKPF 301 C ITEDMLRYK+RWIRLGEILHP+EY R+ + AF++LRNN Sbjct: 237 RAERRFLLGLLEQCGNITEDMLRYKKRWIRLGEILHPAEYHTRFPKTHRAFEMLRNNIKV 296 Query: 302 TTFNGSVELAFKYRQIWTLLDLLMQRPGEFARRLDQLLR--STEYTEY--VVLAFGEVAN 357 TFNG +E A R I T +LL RPGEFARRLD L+R S E T+ ++ F + Sbjct: 297 ETFNGKIEAALLNRDIMTAKNLLKTRPGEFARRLDHLIRLCSNESTDIFNILEEFLSIIG 356 Query: 358 QVSTPVLLQVKNHFARRHESHELRVFFPKGNVAKAFAVPDTLPEIDEAACQDLVQWCERV 417 VSTPVLLQ+ HF R++ +E R FFPKGNVAKA + +TLP I E C +V+ CE Sbjct: 357 NVSTPVLLQLTAHFKHRNDKNEFRTFFPKGNVAKAIGIENTLPFISEDICLMIVKMCEDT 416 Query: 418 LMERFSLLPPLGKTYVDERLQDYHVPFSQRSASKALHTIVRGSRVPMMEGDTVRFFSWWK 477 L RF+ LP LGK ++DE+L+++ +PFSQRSASKAL T+ RGS+V + EGDT+RFF WWK Sbjct: 417 LKNRFAELPSLGKVFLDEQLKNHLIPFSQRSASKALRTLSRGSKVDLPEGDTIRFFLWWK 476 Query: 478 EGTVNGTPTGRVDIDLSAVLYDHNWQYVEHISYTNLRSSKYKAVHSGDIVSAPQGACEFI 537 EG VNG TGRVDIDLSA +YD +WQY EH+S+TNLRS +KA HSGDI SAP+GA EFI Sbjct: 477 EGYVNGQHTGRVDIDLSAAMYDEDWQYKEHVSFTNLRSKNFKAYHSGDITSAPKGASEFI 536 Query: 538 DLHIPSIVDYGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEPATVSNKIDV 597 D IPS++ YGGRY+V TL SYT+QPY +LPECF GWM+R+ PGSGEIFEP+TV +K+D+ Sbjct: 537 DFDIPSVLKYGGRYVVMTLLSYTDQPYKDLPECFTGWMVRQYPGSGEIFEPSTVQDKVDI 596 Query: 598 TADTEIAVPVILDLVERRIIWTDLSLTRHPHYYNNVEGNQKGMVLIGKAMIDLRKPDLYD 657 TADT+I++PVILDL ER++IWTDLSLTR Y N +E NQKGM+L+GKA+ +L KP+LYD Sbjct: 597 TADTQISIPVILDLKERKLIWTDLSLTRDLTYDNTIEANQKGMILVGKALTNLVKPNLYD 656 Query: 658 LFHLHSKARGELVAAADQADTIFSVDTGVTPFDIERIMAEYV 699 LF LH +ARGELV ++A+TIFS++ G+TPFDIE+I+++++ Sbjct: 657 LFRLHIEARGELVQDIEEAETIFSLNKGITPFDIEKIISDFI 698 >C2RQ89.1 C2RQ89_BACCE Putative uncharacterized protein Length = 703 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/702 (54%), Positives = 498/702 (70%), Gaps = 8/702 (1%) Query: 2 MINTIFLRRANKLIVDEGKGPDRLPRAYLATAAKNMETLGFTFSRPLMRALSTLPKEQFE 61 M N+I++RR+ K+I+ + ++LP YLATA KN+E+LGFTFS PL+ L TL F Sbjct: 1 MKNSIYIRRSLKVIIK--REENKLPNMYLATALKNLESLGFTFSEPLIEELQTLSVGAFT 58 Query: 62 ALYDQMIADLRAMVGAHVKYCPMYPAFPMQVMQADEAELYLNAFYYYLTLDLPEYAAADR 121 + Y +++ L+ MVGAH+++ PMYP FP Q+M +A+LY+NA +Y+TL LP +R Sbjct: 59 SFYKELVKHLKEMVGAHIQFTPMYPNFPQQMMDLSDADLYINAVIHYVTLRLPVSKVEER 118 Query: 122 PALQDQVNLKVIDLGSTAELHALISQLIQAKGSISETDKKDIDTVLEFADPEAMNEILPS 181 L D V+LKVIDLGS + + +ISQLI+A SIS TDK D++ + E ++ LP+ Sbjct: 119 LPLLDSVDLKVIDLGSEEDFNQMISQLIRANSSISSTDKTDVEWAI--THTEDVSCFLPN 176 Query: 182 GIPFKENAGFVAASLLKHEKANVEQIGRYFTTATDVLRLAVAWSDGDVSLAEATXXXXXX 241 IP KEN F+ LL + K + + +YF TATDVLRLAVA S+GDVSLA + Sbjct: 177 VIPHKENMSFIIGVLLINRKISADAAAKYFKTATDVLRLAVALSEGDVSLASSVRFKKFN 236 Query: 242 XXXXXXXXXXXXXCHPITEDMLRYKERWIRLGEILHPSEYKHRYMRCEEAFDILRNNKPF 301 C ITEDMLRYK+RWIRLGEILHP+EY R+ + AF+ILRNN Sbjct: 237 RAERRFLLGLLEQCGNITEDMLRYKKRWIRLGEILHPAEYHTRFPKTHRAFEILRNNIKV 296 Query: 302 TTFNGSVELAFKYRQIWTLLDLLMQRPGEFARRLDQLLRSTEYTEYVVL----AFGEVAN 357 TFNG +E A R I T +LL RPGEFARRLD L+R T V F + Sbjct: 297 ETFNGKIEAALLNRDIMTAKNLLKTRPGEFARRLDHLIRLCSDTSTNVFNILEEFLSIIG 356 Query: 358 QVSTPVLLQVKNHFARRHESHELRVFFPKGNVAKAFAVPDTLPEIDEAACQDLVQWCERV 417 VSTPVLLQ+ HF R++ +E R FFPKGNVAKA + +TLP I E C +V+ CE Sbjct: 357 DVSTPVLLQLTAHFKHRNDKNEFRTFFPKGNVAKAIGIENTLPFISEDICLMIVKMCEDT 416 Query: 418 LMERFSLLPPLGKTYVDERLQDYHVPFSQRSASKALHTIVRGSRVPMMEGDTVRFFSWWK 477 L RF+ LP LGK ++DE+L+++ VPFSQRSASKAL T+ RGS+V + EGDT+RFF WWK Sbjct: 417 LKNRFAELPSLGKVFLDEQLKNHLVPFSQRSASKALRTLSRGSKVDLPEGDTIRFFLWWK 476 Query: 478 EGTVNGTPTGRVDIDLSAVLYDHNWQYVEHISYTNLRSSKYKAVHSGDIVSAPQGACEFI 537 EG VNG TGRVDIDLSA +YD +WQY EH+S+TNLRS +KA HSGDI SAP+GA EFI Sbjct: 477 EGYVNGQHTGRVDIDLSAAMYDEDWQYKEHVSFTNLRSKNFKAYHSGDITSAPKGASEFI 536 Query: 538 DLHIPSIVDYGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEPATVSNKIDV 597 D IPS++ YGGRY+V TL SYT+QPY +LPECF GWM+R+ PGSGEIFEP+TV +K+D+ Sbjct: 537 DFDIPSVLKYGGRYVVMTLLSYTDQPYKDLPECFTGWMVRQYPGSGEIFEPSTVQDKVDI 596 Query: 598 TADTEIAVPVILDLVERRIIWTDLSLTRHPHYYNNVEGNQKGMVLIGKAMIDLRKPDLYD 657 TADT+I++PVILDL ER++IWTDLSLTR Y N +E NQKGM+L+GKA+ +L KP+LYD Sbjct: 597 TADTQISIPVILDLKERKLIWTDLSLTRDLTYDNTIEANQKGMILVGKALTNLVKPNLYD 656 Query: 658 LFHLHSKARGELVAAADQADTIFSVDTGVTPFDIERIMAEYV 699 LF LH +ARGELV ++A+TIFS++ G+TPFDIE+I+++++ Sbjct: 657 LFRLHIEARGELVQDIEEAETIFSLNKGITPFDIEKIISDFI 698 >C3ILE1.1 C3ILE1_BACTU Putative uncharacterized protein Length = 703 Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/702 (54%), Positives = 502/702 (71%), Gaps = 8/702 (1%) Query: 2 MINTIFLRRANKLIVDEGKGPDRLPRAYLATAAKNMETLGFTFSRPLMRALSTLPKEQFE 61 M N+I++RR+ K+I+ + ++LP YLAT KN+E+LGFTFS PL+ L TL + F Sbjct: 1 MKNSIYIRRSLKVIIK--REENKLPNIYLATVLKNLESLGFTFSEPLIEELQTLSVDTFT 58 Query: 62 ALYDQMIADLRAMVGAHVKYCPMYPAFPMQVMQADEAELYLNAFYYYLTLDLPEYAAADR 121 + Y +++ L+ MVGAH+++ PMYP FP Q+M +A+LY+NA +Y+TL LP +R Sbjct: 59 SFYKELVKHLKEMVGAHIQFAPMYPNFPQQMMDLSDADLYINAIIHYVTLRLPVSKVEER 118 Query: 122 PALQDQVNLKVIDLGSTAELHALISQLIQAKGSISETDKKDIDTVLEFADPEAMNEILPS 181 L D V+LKVI+LGS + + +ISQLI A SIS TDK D++ + E ++ LP+ Sbjct: 119 LPLLDSVDLKVINLGSEEDFNQMISQLISANSSISSTDKTDVEWAI--THTEDVSCFLPN 176 Query: 182 GIPFKENAGFVAASLLKHEKANVEQIGRYFTTATDVLRLAVAWSDGDVSLAEATXXXXXX 241 IP KEN F+ LL + K + + +YF TATDVLRLAVA S+GDVSLA + Sbjct: 177 VIPHKENMSFIIGVLLINRKISADAAAKYFKTATDVLRLAVALSEGDVSLASSVRFKKFN 236 Query: 242 XXXXXXXXXXXXXCHPITEDMLRYKERWIRLGEILHPSEYKHRYMRCEEAFDILRNNKPF 301 C ITEDMLRYK+RWIRLGEILHP+EY R+ + AF+ILRNN Sbjct: 237 RAERRFLLGLLEQCGNITEDMLRYKKRWIRLGEILHPAEYHTRFPKTHRAFEILRNNIKV 296 Query: 302 TTFNGSVELAFKYRQIWTLLDLLMQRPGEFARRLDQLLR--STEYTE--YVVLAFGEVAN 357 TFNG +E A R I T +LL RPGEFARRLD L+R S + T+ +++ F + Sbjct: 297 ETFNGKIEAALLNRDIMTAKNLLKTRPGEFARRLDHLIRLCSDKSTDVFHILEEFLSIIG 356 Query: 358 QVSTPVLLQVKNHFARRHESHELRVFFPKGNVAKAFAVPDTLPEIDEAACQDLVQWCERV 417 VSTPVLLQ+ HF R++ +E R FFPKGNVAKA + +TLP I E C +V+ CE Sbjct: 357 DVSTPVLLQLTAHFKHRNDKNEFRTFFPKGNVAKAIGIENTLPFISEDICLMIVKMCEDT 416 Query: 418 LMERFSLLPPLGKTYVDERLQDYHVPFSQRSASKALHTIVRGSRVPMMEGDTVRFFSWWK 477 L RF+ LP LGK ++DE+L+++ VPFSQRSASKAL T+ RGS+V + EGDT+RFF WWK Sbjct: 417 LKNRFAKLPSLGKVFLDEQLKNHLVPFSQRSASKALRTLSRGSKVDLPEGDTIRFFLWWK 476 Query: 478 EGTVNGTPTGRVDIDLSAVLYDHNWQYVEHISYTNLRSSKYKAVHSGDIVSAPQGACEFI 537 EG VNG TGRVDIDLSA +YD +WQY EH+S+TNLRS +KA HSGDI SAP+GA EFI Sbjct: 477 EGYVNGQHTGRVDIDLSAAMYDEDWQYKEHVSFTNLRSKNFKAYHSGDITSAPKGASEFI 536 Query: 538 DLHIPSIVDYGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEPATVSNKIDV 597 D IPS++ YGGRY+V TL SYT+QPY +LPECF GWM+R+ PGSGEIFEP+TV +K+D+ Sbjct: 537 DFDIPSVLKYGGRYVVMTLLSYTDQPYKDLPECFTGWMVRQYPGSGEIFEPSTVQDKVDI 596 Query: 598 TADTEIAVPVILDLVERRIIWTDLSLTRHPHYYNNVEGNQKGMVLIGKAMIDLRKPDLYD 657 TADT+I++PVILDL ER++IWTDLSLTR Y N +E NQKGM+L+GKA+ +L KP+LYD Sbjct: 597 TADTQISIPVILDLKERKLIWTDLSLTRDLTYDNTIEANQKGMILVGKALTNLVKPNLYD 656 Query: 658 LFHLHSKARGELVAAADQADTIFSVDTGVTPFDIERIMAEYV 699 LF LH +ARGELV ++A+TIFS+D G+TPFDIE+I+++++ Sbjct: 657 LFRLHIEARGELVQDIEEAETIFSLDKGITPFDIEKIISDFI 698 >C3DV64.1 C3DV64_BACTS Putative uncharacterized protein Length = 703 Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/702 (54%), Positives = 502/702 (71%), Gaps = 8/702 (1%) Query: 2 MINTIFLRRANKLIVDEGKGPDRLPRAYLATAAKNMETLGFTFSRPLMRALSTLPKEQFE 61 M N+I++RR+ K+I+ + ++LP YLAT KN+E+LGFTFS PL+ L TL + F Sbjct: 1 MKNSIYIRRSLKVIIK--REENKLPNIYLATVLKNLESLGFTFSEPLIEELQTLSVDTFT 58 Query: 62 ALYDQMIADLRAMVGAHVKYCPMYPAFPMQVMQADEAELYLNAFYYYLTLDLPEYAAADR 121 + Y +++ L+ MVGAH+++ PMYP FP Q+M +A+LY+NA +Y+TL LP +R Sbjct: 59 SFYKELVKHLKEMVGAHIQFAPMYPNFPQQMMDLSDADLYINAIIHYVTLRLPVSKVEER 118 Query: 122 PALQDQVNLKVIDLGSTAELHALISQLIQAKGSISETDKKDIDTVLEFADPEAMNEILPS 181 L D V+LKVI+LGS + + +ISQLI A SIS TDK D++ + E ++ LP+ Sbjct: 119 LPLLDSVDLKVINLGSEEDFNQMISQLISANSSISSTDKTDVEWAI--THTEDVSCFLPN 176 Query: 182 GIPFKENAGFVAASLLKHEKANVEQIGRYFTTATDVLRLAVAWSDGDVSLAEATXXXXXX 241 IP KEN F+ LL + K + + +YF TATDVLRLAVA S+GDVSLA + Sbjct: 177 VIPHKENMSFIIGVLLINRKISADAAAKYFKTATDVLRLAVALSEGDVSLASSVRFKKFN 236 Query: 242 XXXXXXXXXXXXXCHPITEDMLRYKERWIRLGEILHPSEYKHRYMRCEEAFDILRNNKPF 301 C ITEDMLRYK+RWIRLGEILHP+EY R+ + AF+ILRNN Sbjct: 237 RAERRFLLGLLEQCGNITEDMLRYKKRWIRLGEILHPAEYHTRFPKTHRAFEILRNNIKV 296 Query: 302 TTFNGSVELAFKYRQIWTLLDLLMQRPGEFARRLDQLLR--STEYTE--YVVLAFGEVAN 357 TFNG +E A R I T +LL RPGEFARRLD L+R S + T+ +++ F + Sbjct: 297 ETFNGKIEAALLNRDIMTAKNLLKTRPGEFARRLDHLIRLCSDKSTDVFHILEEFLSIIG 356 Query: 358 QVSTPVLLQVKNHFARRHESHELRVFFPKGNVAKAFAVPDTLPEIDEAACQDLVQWCERV 417 VSTPVLLQ+ HF R++ +E R FFPKGNVAKA + +TLP I E C +V+ CE Sbjct: 357 DVSTPVLLQLTAHFKHRNDKNEFRTFFPKGNVAKAIGIENTLPFISEDICLMIVKMCEDT 416 Query: 418 LMERFSLLPPLGKTYVDERLQDYHVPFSQRSASKALHTIVRGSRVPMMEGDTVRFFSWWK 477 L RF+ LP LGK ++DE+L+++ VPFSQRSASKAL T+ RGS+V + EGDT+RFF WWK Sbjct: 417 LKNRFAKLPSLGKVFLDEQLKNHLVPFSQRSASKALRTLSRGSKVDLPEGDTIRFFLWWK 476 Query: 478 EGTVNGTPTGRVDIDLSAVLYDHNWQYVEHISYTNLRSSKYKAVHSGDIVSAPQGACEFI 537 EG VNG TGRVDIDLSA +YD +WQY EH+S+TNLRS +KA HSGDI SAP+GA EFI Sbjct: 477 EGYVNGQHTGRVDIDLSAAMYDEDWQYKEHVSFTNLRSKNFKAYHSGDITSAPKGASEFI 536 Query: 538 DLHIPSIVDYGGRYIVATLHSYTNQPYCNLPECFVGWMMRKKPGSGEIFEPATVSNKIDV 597 D IPS++ YGGRY+V TL SYT+QPY +LPECF GWM+R+ PGSGEIFEP+TV +K+D+ Sbjct: 537 DFDIPSVLKYGGRYVVMTLLSYTDQPYKDLPECFTGWMVRQYPGSGEIFEPSTVQDKVDI 596 Query: 598 TADTEIAVPVILDLVERRIIWTDLSLTRHPHYYNNVEGNQKGMVLIGKAMIDLRKPDLYD 657 TADT+I++PVILDL ER++IWTDLSLTR Y N +E NQKGM+L+GKA+ +L KP+LYD Sbjct: 597 TADTQISIPVILDLKERKLIWTDLSLTRDLTYDNTIEANQKGMILVGKALTNLVKPNLYD 656 Query: 658 LFHLHSKARGELVAAADQADTIFSVDTGVTPFDIERIMAEYV 699 LF LH +ARGELV ++A+TIFS+D G+TPFDIE+I+++++ Sbjct: 657 LFRLHIEARGELVQDIEEAETIFSLDKGITPFDIEKIISDFI 698 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,060,035,840 Number of extensions: 166515904 Number of successful extensions: 359625 Number of sequences better than 1.0e-05: 61 Number of HSP's gapped: 359405 Number of HSP's successfully gapped: 67 Length of query: 700 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 557 Effective length of database: 1,713,491,058 Effective search space: 954414519306 Effective search space used: 954414519306 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)