BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0055.p (394 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBS3.1 B3KBS3_9BACI Major facilitator superfamily MFS_1 465 e-129 C0Z8B1.1 C0Z8B1_BREBN Putative transporter 460 e-127 B1DIC1.1 B1DIC1_9BACL Major facilitator superfamily MFS_1 351 9e-95 B3KAF5.1 B3KAF5_9BACI Major facilitator superfamily MFS_1 343 2e-92 O34663.1 YBCL_BACSU Uncharacterized MFS-type transporter ybcL 337 1e-90 >B3KBS3.1 B3KBS3_9BACI Major facilitator superfamily MFS_1 Length = 391 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 224/385 (58%), Positives = 300/385 (77%) Query: 1 MIKSWKVYILAIISFLVGTSEFVIAGILDLVSRDVGVTIAAAGQLISVYSISYAVGTPIL 60 M SWK+YILAI+SFLVGTSEFVI GILD+++ D+GV++ AAGQLI+VYS++YA+GTPIL Sbjct: 1 MRNSWKIYILAIVSFLVGTSEFVITGILDMLASDIGVSVVAAGQLITVYSLAYAIGTPIL 60 Query: 61 IAATSKLSRRTLMLAALALFFIGNLITVVSTGYPMLVGARVVLALSTGVFTVVALTVSAQ 120 IA T+K+ RR LML+AL LFF+GNLITV +TGY ML+GAR++LA+STGVF VVA+TV+A+ Sbjct: 61 IALTAKMDRRKLMLSALGLFFVGNLITVTTTGYGMLLGARIILAISTGVFMVVAMTVAAK 120 Query: 121 IAGPGKQGSAIATIMMGFNLSLILGVPLGRVIASTYDWKMIFYGIGLLSFIAMLVILMAL 180 ++ PGKQGSAIAT+++GFNL+LILGVPLGR+IA ++DWK+IF G+G LS +AM+V+L+ + Sbjct: 121 MSHPGKQGSAIATVLVGFNLALILGVPLGRIIAGSHDWKIIFTGVGALSLVAMVVLLLTI 180 Query: 181 PKSQGEANVPLKEQXXXXXXXXXXXXXSISFFWMVGYTIIYTFITPFLMNITGMSNGMVS 240 PKS+GEA VP++EQ SISFFW++GYT++YT+ITPFL++ITGMS GM++ Sbjct: 181 PKSEGEAPVPIREQLALLKSPRIAVALSISFFWILGYTMLYTYITPFLLDITGMSEGMIN 240 Query: 241 IALFSFGIASLLGAQAGGYGADKLGIPRTLNGSLMIHAGILILMSLFAHTSIAVFPLLLL 300 + LF+FG+ASL+G+Q GGYGADK GIPRT+ G L+ H+GIL+L++ F+H+S+ V PLL+L Sbjct: 241 VGLFAFGLASLIGSQVGGYGADKWGIPRTMIGGLLFHSGILLLLTAFSHSSMFVLPLLML 300 Query: 301 WSFFAWSTGPIQQVYMISLAPSAAGILLSLNTSFIQXXXXXXXXXXXXXXERFSLQSXXX 360 WSFFAWS GP+QQVY+I +AP A+GI+LSLN S +Q E SL + Sbjct: 301 WSFFAWSMGPVQQVYLIGMAPQASGIVLSLNNSIVQLGMAVGAVIGGIVVESISLAAVGW 360 Query: 361 XXXXXXXXXXXXXXXSFSMRSQSAN 385 S S+R +SA Sbjct: 361 FGGVGVAMALIPAIISLSIRRRSAT 385 >C0Z8B1.1 C0Z8B1_BREBN Putative transporter Length = 395 Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust. Identities = 239/383 (62%), Positives = 300/383 (78%) Query: 1 MIKSWKVYILAIISFLVGTSEFVIAGILDLVSRDVGVTIAAAGQLISVYSISYAVGTPIL 60 M+ SWK+YILAI+SFLVGTSEFVIAGILD V+ DVGVT+AAAGQLI+VYS++YA+GTPIL Sbjct: 1 MLNSWKIYILAIVSFLVGTSEFVIAGILDRVASDVGVTLAAAGQLITVYSLAYAIGTPIL 60 Query: 61 IAATSKLSRRTLMLAALALFFIGNLITVVSTGYPMLVGARVVLALSTGVFTVVALTVSAQ 120 IA T+K+ RR LMLAAL LF +GNL+T+ +TG+ ML GAR++LA+ TGVF VVALTV+++ Sbjct: 61 IAITAKMDRRKLMLAALVLFLLGNLVTITTTGFAMLFGARIILAIGTGVFMVVALTVASK 120 Query: 121 IAGPGKQGSAIATIMMGFNLSLILGVPLGRVIASTYDWKMIFYGIGLLSFIAMLVILMAL 180 IA PGKQG AIAT+++GFNL+LILGVPLGRVIA +YDWK+IF GIG+LS IAM V+L+ + Sbjct: 121 IAQPGKQGGAIATVLLGFNLALILGVPLGRVIAGSYDWKIIFTGIGVLSLIAMFVLLLTI 180 Query: 181 PKSQGEANVPLKEQXXXXXXXXXXXXXSISFFWMVGYTIIYTFITPFLMNITGMSNGMVS 240 PKS+GE VP++EQ SISFFW++GYTIIYT+I+PFL+ ITGMS+ MVS Sbjct: 181 PKSKGEIPVPIREQLSLLKTPRISIALSISFFWILGYTIIYTYISPFLLTITGMSDRMVS 240 Query: 241 IALFSFGIASLLGAQAGGYGADKLGIPRTLNGSLMIHAGILILMSLFAHTSIAVFPLLLL 300 I LF FGIASLLG+Q GGYGADK GIPRT+ G L++H+GIL+L+++F+H+S+ V PLL+L Sbjct: 241 IGLFVFGIASLLGSQVGGYGADKWGIPRTMIGGLLLHSGILLLITVFSHSSVFVLPLLML 300 Query: 301 WSFFAWSTGPIQQVYMISLAPSAAGILLSLNTSFIQXXXXXXXXXXXXXXERFSLQSXXX 360 WSFFAWSTGP+QQVY+I +AP A+GI+LSLNTS +Q E SLQ+ Sbjct: 301 WSFFAWSTGPVQQVYLIGMAPKASGIILSLNTSIVQLGMAVGSVIGGMVVENISLQAVGW 360 Query: 361 XXXXXXXXXXXXXXXSFSMRSQS 383 S SMRSQS Sbjct: 361 IGAIGVAIALLPAVVSLSMRSQS 383 >B1DIC1.1 B1DIC1_9BACL Major facilitator superfamily MFS_1 Length = 400 Score = 351 bits (900), Expect = 9e-95, Method: Compositional matrix adjust. Identities = 182/331 (54%), Positives = 255/331 (77%) Query: 6 KVYILAIISFLVGTSEFVIAGILDLVSRDVGVTIAAAGQLISVYSISYAVGTPILIAATS 65 K+Y+LA++SFLVGTSEF+IAGILD VS D+GV++AAAGQLI+V+S++Y GTP L+AA + Sbjct: 6 KIYMLALVSFLVGTSEFIIAGILDKVSDDIGVSVAAAGQLITVFSLAYGFGTPFLMAAAA 65 Query: 66 KLSRRTLMLAALALFFIGNLITVVSTGYPMLVGARVVLALSTGVFTVVALTVSAQIAGPG 125 K+ R+ LML AL++F +GN+ +G+ L+ +RV++ALS+GVF V ALTV+A++A Sbjct: 66 KVDRKRLMLYALSIFIVGNVAAYFFSGFTALIVSRVIVALSSGVFVVTALTVAAKLAPAE 125 Query: 126 KQGSAIATIMMGFNLSLILGVPLGRVIASTYDWKMIFYGIGLLSFIAMLVILMALPKSQG 185 KQGSAIAT++MGF+ +LI+GVPLGR++AS YDWK++F GIGLL +A+L+I +A+PK+ G Sbjct: 126 KQGSAIATLVMGFSTALIVGVPLGRLVASAYDWKLVFGGIGLLGLLALLLIALAIPKTDG 185 Query: 186 EANVPLKEQXXXXXXXXXXXXXSISFFWMVGYTIIYTFITPFLMNITGMSNGMVSIALFS 245 E VPL++Q I+FFW+ GY+I YT+I+PFL++ITGMS VSIAL + Sbjct: 186 EQPVPLRDQLKLLKNPKILVALGITFFWLGGYSITYTYISPFLLDITGMSEKFVSIALLA 245 Query: 246 FGIASLLGAQAGGYGADKLGIPRTLNGSLMIHAGILILMSLFAHTSIAVFPLLLLWSFFA 305 FGIASL+G++ GG+ D+ G RTL ++ HA L+++S AH+ +FPLL+LWSF A Sbjct: 246 FGIASLIGSKLGGFSTDRWGFKRTLVTGMLFHAAWLVVISFAAHSPGLMFPLLMLWSFSA 305 Query: 306 WSTGPIQQVYMISLAPSAAGILLSLNTSFIQ 336 WS+GP QQ ++ISLAP A I+LSLN+S IQ Sbjct: 306 WSSGPTQQYHLISLAPEATSIMLSLNSSVIQ 336 >B3KAF5.1 B3KAF5_9BACI Major facilitator superfamily MFS_1 Length = 390 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 172/357 (48%), Positives = 247/357 (69%) Query: 1 MIKSWKVYILAIISFLVGTSEFVIAGILDLVSRDVGVTIAAAGQLISVYSISYAVGTPIL 60 M +WKVY+LA++SFLVGTS ++I+GILD ++ +G ++AAAGQLI+VYS++YAVGTPIL Sbjct: 1 MKSTWKVYVLALVSFLVGTSNYIISGILDRIAETMGTSVAAAGQLITVYSLAYAVGTPIL 60 Query: 61 IAATSKLSRRTLMLAALALFFIGNLITVVSTGYPMLVGARVVLALSTGVFTVVALTVSAQ 120 +A T+K+ RR L+L +L LF I NL+T + +G+ + + AR++ AL GV TV AL+++A+ Sbjct: 61 MALTAKMDRRKLLLYSLGLFIIANLLTFILSGFGLFIAARIITALGAGVVTVNALSIAAK 120 Query: 121 IAGPGKQGSAIATIMMGFNLSLILGVPLGRVIASTYDWKMIFYGIGLLSFIAMLVILMAL 180 IA PGKQ SAIA + MG SLI+GVPLGR++AS + WK +F I ++ IAMLVI Sbjct: 121 IAPPGKQASAIANVTMGITASLIIGVPLGRMVASAFGWKAVFLAIAIVGVIAMLVIAAVF 180 Query: 181 PKSQGEANVPLKEQXXXXXXXXXXXXXSISFFWMVGYTIIYTFITPFLMNITGMSNGMVS 240 P+ QG+ VPL +Q +I+FFW+ GY++ YT+I+PFL+ +T ++ ++S Sbjct: 181 PRMQGDKPVPLIKQFALLKKPQVLVALAITFFWLGGYSLAYTYISPFLLEVTHLNESLIS 240 Query: 241 IALFSFGIASLLGAQAGGYGADKLGIPRTLNGSLMIHAGILILMSLFAHTSIAVFPLLLL 300 ALF FGIASL+G++ GGY ADK GI TL +++H LIL+SL + IAVF +L+L Sbjct: 241 AALFVFGIASLIGSKVGGYSADKRGIKYTLVSGMVLHVISLILLSLVGQSVIAVFAILIL 300 Query: 301 WSFFAWSTGPIQQVYMISLAPSAAGILLSLNTSFIQXXXXXXXXXXXXXXERFSLQS 357 WSF AWS+ P QQ ++ L P ++G++LSLN+S +Q R SL S Sbjct: 301 WSFAAWSSAPAQQFNLVKLVPESSGVMLSLNSSMMQFAMAVGAGIGGLIVNRVSLAS 357 >O34663.1 YBCL_BACSU Uncharacterized MFS-type transporter ybcL Length = 390 Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 171/357 (47%), Positives = 244/357 (68%) Query: 1 MIKSWKVYILAIISFLVGTSEFVIAGILDLVSRDVGVTIAAAGQLISVYSISYAVGTPIL 60 M +WK+YILAI+SFLVGTSE++I+GILD ++ +G+T+AAAGQLI+++S+ YA+ TP+L Sbjct: 1 MSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTLGITLAAAGQLITIFSLVYALSTPVL 60 Query: 61 IAATSKLSRRTLMLAALALFFIGNLITVVSTGYPMLVGARVVLALSTGVFTVVALTVSAQ 120 +A T+ + RR LM+ AL LF GN++ V GY + AR+++A+ GV V ALT++A+ Sbjct: 61 MALTASMDRRKLMMYALGLFVFGNVLAFVLPGYGWFIAARIIMAMGAGVVVVTALTIAAK 120 Query: 121 IAGPGKQGSAIATIMMGFNLSLILGVPLGRVIASTYDWKMIFYGIGLLSFIAMLVILMAL 180 IA GKQGSAIAT++MGF SLI+GVPLGR+IA WK +F I LL IAM+VI L Sbjct: 121 IASEGKQGSAIATVVMGFTASLIIGVPLGRMIAVALGWKSVFGAIALLGLIAMVVIFFTL 180 Query: 181 PKSQGEANVPLKEQXXXXXXXXXXXXXSISFFWMVGYTIIYTFITPFLMNITGMSNGMVS 240 P ++G+ VPL +Q SI+FFW+ GY++ YT+++P+L+NI+G++ ++S Sbjct: 181 PYTEGDKPVPLLQQLALFKKRKVAMGLSITFFWLGGYSVAYTYLSPYLLNISGINGKLLS 240 Query: 241 IALFSFGIASLLGAQAGGYGADKLGIPRTLNGSLMIHAGILILMSLFAHTSIAVFPLLLL 300 L FGIASL+G++ GGY DK G+P TL G + +H LIL+SL H+ I V +L+L Sbjct: 241 GVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLSLVTHSYIGVLVILIL 300 Query: 301 WSFFAWSTGPIQQVYMISLAPSAAGILLSLNTSFIQXXXXXXXXXXXXXXERFSLQS 357 WSF AWSTGP QQ ++ ++ P +G+LLS+N S +Q E SL S Sbjct: 301 WSFAAWSTGPTQQFHLATIEPEMSGVLLSMNQSMMQFAMAVGAGIGGVFVENVSLAS 357 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.138 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,792,195,118 Number of extensions: 65650055 Number of successful extensions: 340201 Number of sequences better than 1.0e-05: 5205 Number of HSP's gapped: 339820 Number of HSP's successfully gapped: 5205 Length of query: 394 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 256 Effective length of database: 1,760,596,133 Effective search space: 450712610048 Effective search space used: 450712610048 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 132 (55.5 bits)