BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0044.p (222 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DCL7.1 B1DCL7_9BACL Putative uncharacterized protein 315 1e-84 Q4EKD2.1 Q4EKD2_LISMO Putative uncharacterized protein 198 3e-49 Q721Q9.1 Q721Q9_LISMF Putative uncharacterized protein 197 7e-49 C1L1H7.1 C1L1H7_LISMC Putative uncharacterized protein 197 7e-49 C4VEQ8.1 C4VEQ8_ENTFA Putative uncharacterized protein 196 9e-49 >B1DCL7.1 B1DCL7_9BACL Putative uncharacterized protein Length = 226 Score = 315 bits (808), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 152/224 (67%), Positives = 192/224 (85%), Gaps = 3/224 (1%) Query: 1 MAKTIVDKLNLQKFQKVAVLYRPENENSLTGLGDHDTELTA-SRYDLIFAYVLNMESLQD 59 M+KTIV+KLNL K++K A+L++PE ++L GL ++TEL A SRYDLIFA+VL+M SLQ Sbjct: 1 MSKTIVEKLNLHKYKKAAILHQPEGNDALAGLEQYETELQAGSRYDLIFAFVLDMPSLQK 60 Query: 60 LVNQVIDHNYLNKGGYLYAAYPKKGNKVYSTYIHRDSLFAGVGA-DEDGYIGESSLKFAR 118 L++++I+ NYL + GYLYAAYPKKGNK Y TYIHRDSLF G+GA +EDGYIG S +KFAR Sbjct: 61 LMSEIIEKNYLEESGYLYAAYPKKGNKAYPTYIHRDSLFEGLGASEEDGYIGNSEIKFAR 120 Query: 119 MVGLNEVFTVVGFKEEARKKKDASSK-PSQRVDDYTSMIPAVEKELQDSPEALALYQSLT 177 MVGL++VFTVVGFK EARKK +SSK PSQ V DY +++ VE+EL+++PE LA ++SLT Sbjct: 121 MVGLDDVFTVVGFKSEARKKGASSSKKPSQSVTDYEALVSQVEEELRENPETLAFFRSLT 180 Query: 178 PGYRKDWARYVYSAVQEETRAKRRAEMKKILGEGYKSVDLYRRK 221 PGYRKDWARYV+SAVQEETRAKR+AEM+ +LGEGYKS+DLYRR+ Sbjct: 181 PGYRKDWARYVFSAVQEETRAKRKAEMRVVLGEGYKSIDLYRRR 224 >Q4EKD2.1 Q4EKD2_LISMO Putative uncharacterized protein Length = 224 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 137/218 (62%) Query: 3 KTIVDKLNLQKFQKVAVLYRPENENSLTGLGDHDTELTASRYDLIFAYVLNMESLQDLVN 62 KTIV+KL L K+++ +L +P + L +++ +L +YDLIF +V +E L V Sbjct: 4 KTIVEKLQLTKYKEAVILNQPNGADCFQNLANYEEKLADKQYDLIFDFVETLEELITFVQ 63 Query: 63 QVIDHNYLNKGGYLYAAYPKKGNKVYSTYIHRDSLFAGVGADEDGYIGESSLKFARMVGL 122 +VI N L GYL+ AYPKKGNK ++TY+HRD L + DE+GY+ S+LKF RMV L Sbjct: 64 KVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRMVAL 123 Query: 123 NEVFTVVGFKEEARKKKDASSKPSQRVDDYTSMIPAVEKELQDSPEALALYQSLTPGYRK 182 +E +TVVG KE A+ K K + D+Y +P V + L D + A Y +L GY++ Sbjct: 124 DETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLVAEFLADKGDLQAFYNNLATGYQR 183 Query: 183 DWARYVYSAVQEETRAKRRAEMKKILGEGYKSVDLYRR 220 WARY+YSA Q T+ KRR EM IL +GYK+ DLYR+ Sbjct: 184 VWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQ 221 >Q721Q9.1 Q721Q9_LISMF Putative uncharacterized protein Length = 224 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 137/218 (62%) Query: 3 KTIVDKLNLQKFQKVAVLYRPENENSLTGLGDHDTELTASRYDLIFAYVLNMESLQDLVN 62 KTIV+KL L K+++ +L +P + L +++ +L +YDLIF +V +E L V Sbjct: 4 KTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELITFVQ 63 Query: 63 QVIDHNYLNKGGYLYAAYPKKGNKVYSTYIHRDSLFAGVGADEDGYIGESSLKFARMVGL 122 +VI N L GYL+ AYPKKGNK ++TY+HRD L + DE+GY+ S+LKF RMV L Sbjct: 64 KVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRMVAL 123 Query: 123 NEVFTVVGFKEEARKKKDASSKPSQRVDDYTSMIPAVEKELQDSPEALALYQSLTPGYRK 182 +E +TVVG KE A+ K K + D+Y +P V + L D + A Y +L GY++ Sbjct: 124 DETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLVAEFLADKGDLQAFYNNLATGYQR 183 Query: 183 DWARYVYSAVQEETRAKRRAEMKKILGEGYKSVDLYRR 220 WARY+YSA Q T+ KRR EM IL +GYK+ DLYR+ Sbjct: 184 VWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQ 221 >C1L1H7.1 C1L1H7_LISMC Putative uncharacterized protein Length = 224 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 98/218 (44%), Positives = 137/218 (62%) Query: 3 KTIVDKLNLQKFQKVAVLYRPENENSLTGLGDHDTELTASRYDLIFAYVLNMESLQDLVN 62 KTIV+KL L K+++ +L +P + L +++ +L +YDLIF +V +E L V Sbjct: 4 KTIVEKLQLTKYKEAVILNQPNGADYFQNLANYEEKLADKQYDLIFDFVETLEELITFVQ 63 Query: 63 QVIDHNYLNKGGYLYAAYPKKGNKVYSTYIHRDSLFAGVGADEDGYIGESSLKFARMVGL 122 +VI N L GYL+ AYPKKGNK ++TY+HRD L + DE+GY+ S+LKF RMV L Sbjct: 64 KVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPALKTDEEGYVDGSTLKFTRMVAL 123 Query: 123 NEVFTVVGFKEEARKKKDASSKPSQRVDDYTSMIPAVEKELQDSPEALALYQSLTPGYRK 182 +E +TVVG KE A+ K K + D+Y +P V + L D + A Y +L GY++ Sbjct: 124 DETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLVAEFLADKGDLQAFYNNLATGYQR 183 Query: 183 DWARYVYSAVQEETRAKRRAEMKKILGEGYKSVDLYRR 220 WARY+YSA Q T+ KRR EM IL +GYK+ DLYR+ Sbjct: 184 VWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDLYRQ 221 >C4VEQ8.1 C4VEQ8_ENTFA Putative uncharacterized protein Length = 220 Score = 196 bits (499), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 104/220 (47%), Positives = 146/220 (66%), Gaps = 4/220 (1%) Query: 3 KTIVDKLNLQKFQKVAVLYRPENENSLTGLGDHDTELTASRYDLIFAYVLNMESLQDLVN 62 K+IV+KLNL K+Q++ +L RP+ E L+ +L + +LIFA+V M Q++V+ Sbjct: 2 KSIVEKLNLTKYQQLVILNRPQGE-YLSEFASAAQQLPSEPVELIFAFVKTMAEFQEIVS 60 Query: 63 QVIDHNYLNKGGYLYAAYPKKGNKVYSTYIHRDSLFAGVGADE-DGYIGESSLKFARMVG 121 VI+ +L + G LY AYPKKGNK+Y T++HRD +F + +E DGYI S+LKF RMV Sbjct: 61 MVIEGQHLVENGLLYVAYPKKGNKMYPTFVHRDEIFPTLQVNETDGYIKGSTLKFNRMVS 120 Query: 122 LNEVFTVVGFKEEARKKKDASSKPSQRVDDYTSMIPAVEKELQDSPEALALYQSLTPGYR 181 L+E FTVVG K KK A ++ S V DY +P +E +Q P A A + +LTPGY+ Sbjct: 121 LDETFTVVGMKNVL--KKPAKNQTSSAVGDYVQYLPEIEALVQTEPAAAATFAALTPGYQ 178 Query: 182 KDWARYVYSAVQEETRAKRRAEMKKILGEGYKSVDLYRRK 221 K+WARYV+SA + ETR KR+ EM IL EGYK+ LY+++ Sbjct: 179 KEWARYVFSAKRAETRKKRQTEMLVILKEGYKTKALYQQR 218 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,306,639,906 Number of extensions: 54198481 Number of successful extensions: 115324 Number of sequences better than 1.0e-05: 97 Number of HSP's gapped: 115173 Number of HSP's successfully gapped: 97 Length of query: 222 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 91 Effective length of database: 1,826,543,238 Effective search space: 166215434658 Effective search space used: 166215434658 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 128 (53.9 bits)