BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0035.p (250 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein 178 3e-43 B8FR56.1 B8FR56_DESHD Putative uncharacterized protein 178 3e-43 B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein 168 4e-40 A6M1J9.1 A6M1J9_CLOB8 Putative uncharacterized protein 160 9e-38 Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein 156 1e-36 >Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein Length = 308 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 22/257 (8%) Query: 13 IILLNPYTEKDAPRDKQSILDIRGKTADGELINVEMQLFNKYDTEKRTLFYWSKLYSGQL 72 I ++NP K+ DK+SILD+R +T++G IN+E+QL N+YD EKR+L+YW+++YS Q+ Sbjct: 52 ITIMNPELNKEYQGDKKSILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQI 111 Query: 73 QEGQSYKVLKKCVTINILNYSFLP-NNQYHNVFHLREDRSGIPLIDDMELHFLELPKL-- 129 +EG +YK L K VTINIL++++L + YHNVFHL ED L D +E+HF+ELPKL Sbjct: 112 REGMAYKELAKAVTINILDFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLA 171 Query: 130 ---DNHAAPVESGGLVNWLLFLKGVDK----SNWEALTMNEPVLKKAMDTLEFLSQDAEA 182 + +P E+ LV WLL L+G D E + M +PVL +AM E S D Sbjct: 172 KWRNREISPWEN-ELVRWLLLLEGADNQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRI 230 Query: 183 RRLYEDRQKYLHDEASMIXXXXXXXXXXXXKRKA-----------VQMALELLKLGVDPA 231 R Y DR+K + DE + I K +A ++A +LL LG + Sbjct: 231 REAYFDRRKAVLDEKAAIREAELRLKEALEKGRAAGIAAGKAEGKAEVAKKLLDLGFEIT 290 Query: 232 IIAKASELSEAEIIALK 248 +A+A+ LSE +I +LK Sbjct: 291 KVAEATGLSEKDIRSLK 307 >B8FR56.1 B8FR56_DESHD Putative uncharacterized protein Length = 308 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 22/257 (8%) Query: 13 IILLNPYTEKDAPRDKQSILDIRGKTADGELINVEMQLFNKYDTEKRTLFYWSKLYSGQL 72 I ++NP K+ DK+SILD+R +T++G IN+E+QL N+YD EKR+L+YW+++YS Q+ Sbjct: 52 ITIMNPELNKEYQGDKKSILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQI 111 Query: 73 QEGQSYKVLKKCVTINILNYSFLP-NNQYHNVFHLREDRSGIPLIDDMELHFLELPKL-- 129 +EG +YK L K VTINIL++++L + YHNVFHL ED L D +E+HF+ELPKL Sbjct: 112 REGMAYKELAKAVTINILDFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLA 171 Query: 130 ---DNHAAPVESGGLVNWLLFLKGVDK----SNWEALTMNEPVLKKAMDTLEFLSQDAEA 182 + +P E+ LV WLL L+G D E + M +PVL +AM E S D Sbjct: 172 KWRNREISPWEN-ELVRWLLLLEGADNQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRI 230 Query: 183 RRLYEDRQKYLHDEASMIXXXXXXXXXXXXKRKA-----------VQMALELLKLGVDPA 231 R Y DR+K + DE + I K +A ++A +LL LG + Sbjct: 231 REAYFDRRKAVLDEKAAIREAELRLKEALEKGRAAGIAAGKAEGKAEVAKKLLDLGFEIT 290 Query: 232 IIAKASELSEAEIIALK 248 +A+A+ LSE +I +LK Sbjct: 291 KVAEATGLSEKDIRSLK 307 >B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein Length = 325 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 126/200 (63%), Gaps = 9/200 (4%) Query: 10 LTEIILLNPYTEKDAPRDKQSILDIRGKTADGELINVEMQLFNKYDTEKRTLFYWSKLYS 69 + EI ++NP K+ P DK+SILD+R T+ G IN+E+QL N+YD EKR+L+YW+++YS Sbjct: 42 IEEITIINPELNKEYPEDKKSILDVRAITSQGMQINIEIQLSNQYDMEKRSLYYWAQMYS 101 Query: 70 GQLQEGQSYKVLKKCVTINILNYSFLP-NNQYHNVFHLREDRSGIPLIDDMELHFLELPK 128 Q++EG +YK L K V+INI+++++L + YHNVFHL ED L D +E+HF+ELPK Sbjct: 102 RQIREGMAYKELTKTVSINIVDFNYLKQTSSYHNVFHLYEDEEKFQLTDVLEIHFMELPK 161 Query: 129 L----DNHAAPVESGGLVNWLLFLKGVDKSN----WEALTMNEPVLKKAMDTLEFLSQDA 180 L + LV WLL L+G D E + M +PVL +AM+ E S+D Sbjct: 162 LLAKWRKREISLWENELVRWLLLLEGADNQEILQILEEIAMKDPVLYQAMNAWEETSEDP 221 Query: 181 EARRLYEDRQKYLHDEASMI 200 R Y DR+K + DE + I Sbjct: 222 RIREAYFDRRKAILDEKAAI 241 >A6M1J9.1 A6M1J9_CLOB8 Putative uncharacterized protein Length = 278 Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 92/240 (38%), Positives = 145/240 (60%), Gaps = 5/240 (2%) Query: 10 LTEIILLNPYTEKDAPRDKQSILDIRGKTADGELINVEMQLFNKYDTEKRTLFYWSKLYS 69 L +I L+N ++ D++ ILD+R KT GE I++E+Q+ Y +RTLFYWSK+Y+ Sbjct: 39 LEDIELINTELLREFAEDRKGILDVRAKTKSGEHIDIEIQVLYTYYMAERTLFYWSKMYN 98 Query: 70 GQLQEGQSYKVLKKCVTINILNYSFLPNNQYHNVFHLREDRSGIPLIDDMELHFLELPKL 129 GQ++ G +Y LKKC+TINI++++ + N+ H FH+ ED + L D +E+H+LELPKL Sbjct: 99 GQIKSGYTYDKLKKCITINIVDFNCIEINKLHTSFHITEDETNKKLTDVLEIHYLELPKL 158 Query: 130 -DNHAAPVESGGLVNWLLFLKGVDKSNWEALTMNEPVLKKAMDTLEFLSQDAEARRLYED 188 DN+ ES LV W++FL+ +K +E L +KKA + LE +S+D AR YE Sbjct: 159 FDNNIPKDESEPLVQWMMFLQSRNKEAFEMLAEKNEKIKKAYNILEVISKDDNARAAYEA 218 Query: 189 RQKYLHDEASMIXXXXXXXXXXXXKRKAVQMALELLKLGVDPAIIAKASELSEAEIIALK 248 R+ LHD+ + + K ++ A L +G+D ++AK + LS E++ +K Sbjct: 219 REAELHDQMTRL----KSAREEGIKEATIKNAKNFLVMGLDVEMVAKGTGLSVDEVLKIK 274 >Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein Length = 288 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 123/193 (63%), Gaps = 4/193 (2%) Query: 10 LTEIILLNPYTEKDAPRDKQSILDIRGKTADGELINVEMQLFNKYDTEKRTLFYWSKLYS 69 L +I L + + DK S LDI GK DG +IN+E+Q+ N+YD +KRTL+YW+KLY Sbjct: 42 LADITLAERELDPEHIHDKLSRLDILGKGNDGSIINIEVQIANQYDIDKRTLYYWAKLYQ 101 Query: 70 GQLQEGQSYKVLKKCVTINILNYSFLPNNQ-YHNVFHLREDRSGIPLIDDMELHFLELPK 128 GQLQ+GQ YK L + +T+N+LN+ FLP++Q YH++F L E SG L D+E+HFLEL K Sbjct: 102 GQLQKGQRYKDLSRTITVNVLNFGFLPDSQKYHSMFSLYEAHSGYRLNRDLEIHFLELSK 161 Query: 129 LDNHAAPVESGGLVNWLLFLKGVDKSNWEALTMNEPVLKKAMDTLE-FLSQDAEARRLYE 187 + ++ L WL++L + E + M+EP ++KA+ E FL QD E R LYE Sbjct: 162 WKALSVKPKT-RLDKWLMYLSNTNPQEMEEIAMSEPAIRKALTAEEIFLKQDKE-RYLYE 219 Query: 188 DRQKYLHDEASMI 200 R+K L D S I Sbjct: 220 MREKALLDHVSAI 232 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,392,380,228 Number of extensions: 55806255 Number of successful extensions: 118284 Number of sequences better than 1.0e-05: 436 Number of HSP's gapped: 117749 Number of HSP's successfully gapped: 436 Length of query: 250 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 118 Effective length of database: 1,817,122,223 Effective search space: 214420422314 Effective search space used: 214420422314 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)