BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0033.p (709 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KKC5.1 B3KKC5_9BACI Beta-lactamase 824 0.0 A3IBK9.1 A3IBK9_9BACI Penicillin-binding protein 743 0.0 C2YJZ6.1 C2YJZ6_BACCE Putative uncharacterized protein 729 0.0 C2RQ74.1 C2RQ74_BACCE Putative uncharacterized protein 726 0.0 C3FM79.1 C3FM79_BACTB Putative uncharacterized protein 721 0.0 >B3KKC5.1 B3KKC5_9BACI Beta-lactamase Length = 691 Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/655 (59%), Positives = 507/655 (77%), Gaps = 4/655 (0%) Query: 56 RKAAQEKADLLTKTYGTNSVQYAIIDHGNIVVSGQSGKNDEQGQKPLTKETMYGIGSTSK 115 K A EKA LLT+TYGT SVQYA+ID+G I VSGQ+G ND +G+ PLT++TMYGIGSTSK Sbjct: 39 EKIAAEKAKLLTETYGTTSVQYALIDNGKITVSGQAGVNDIEGKIPLTEDTMYGIGSTSK 98 Query: 116 MFTAVAAMQLAEQGKINLDTPVVQYIPEFKMKDERYKQITPRMXXXXXXXXXXXXXTNAF 175 +FTA A M+L + GKINLD P+VQYIPEF MKDERYK+ITPRM NAF Sbjct: 99 VFTAAAVMKLVDDGKINLDAPLVQYIPEFTMKDERYKKITPRMLLNHSSGLQGSSLNNAF 158 Query: 176 LFEDNDTYAHDTLLGQLAGQTLKAAPGAYSVYCNDGFTLAQILVERVSGMDFTSYIHRYI 235 LFEDND +AHDTLL QL+ Q LKA PGA+SVYCNDGFTLA+ILVE+VSG DFT++IH + Sbjct: 159 LFEDNDPHAHDTLLKQLSTQNLKADPGAFSVYCNDGFTLAEILVEKVSGKDFTAFIHEHF 218 Query: 236 TEPLGMAHTKTPLDSLSTAKMAGLYYPAYRGQLPNETSNVIGAGGIYSTAEDLVRFSQIF 295 TEPL M HTKT D+L +MAGLYYPA++GQLPNET NVIG GGIYSTAEDLV+F+QIF Sbjct: 219 TEPLNMDHTKTSQDTLDLNQMAGLYYPAHQGQLPNETINVIGTGGIYSTAEDLVQFAQIF 278 Query: 296 TGKAEGILSGKSSAAMAQDEYKTPLWPDDEASSFDYGYGLGWDNVNLYPFNEYGMKALTK 355 TG+AEGILS S AM Q+EYK LWP+D +SFD YGLGWD+V L+PFN+Y MKA+TK Sbjct: 279 TGEAEGILSAASVKAMEQEEYKKGLWPEDADNSFD--YGLGWDSVRLFPFNQYDMKAVTK 336 Query: 356 GGDTILYHSSLVVLPEQDMAAAVITSGGSSTADRLMANEVLLQALKEKGTISEFKPEKSY 415 GGDTILYH+SLVVLPEQ+MAAAV++SGGSS+ ++L+ANE+LL LKEKGTI EFKPEKS+ Sbjct: 337 GGDTILYHASLVVLPEQNMAAAVLSSGGSSSTNQLLANEILLHTLKEKGTIKEFKPEKSF 396 Query: 416 GAPVKADMPESVLQYSGIYGATNTTVNIDITKGGILSITSEQSPGTPAQTFGYSADGTFR 475 G PV+ADMP+++ +++G YG TN + +DI K G LSIT P PA+ + Y+ADGTF Sbjct: 397 GKPVQADMPDNMAEFAGYYGVTNQQMKVDI-KDGELSITVPMVPDYPAEKYVYTADGTFV 455 Query: 476 SADGNTKLSFVTEENGRTYLWIRQYASLPGLGQMSASVYNAEKLQPQDLPAQTKEAWIQR 535 SADG+ K+SFV E+N R YLW+RQY S+PGLGQM+ S Y+AEK++ L +T AW +R Sbjct: 456 SADGSIKVSFVKEKNDRIYLWVRQYVSIPGLGQMALSQYSAEKMEANPLSKETAAAWAKR 515 Query: 536 DGKKYYLLNEKYTSLVYLMMQP-IQLNVSKQLPGYVLDKRITGPNTAVSELQIPGMSGRD 594 +G+ +Y LNEK+TSL+Y + +P +++N L GY++DK+I P+TAVS+ Q+P + RD Sbjct: 516 EGETFYPLNEKFTSLMYFITKPTVEINSKSGLEGYLIDKKIIDPDTAVSQHQVPAIGSRD 575 Query: 595 LSGYTFFTQDGVEYLDLGGSILVNEAAVKPIYVAKKSTVTIPPSGYARWYTISDKDGGKT 654 S + F+ + GVEYL+ GS+ ++ VKP+Y KKSTVT+ GYA+WYT+ + GKT Sbjct: 576 TSEFRFYKEKGVEYLEGAGSLFISGKHVKPLYKGKKSTVTLQADGYAKWYTVPEAAAGKT 635 Query: 655 VKVSMSSDASFAVYNAKGTCSYFSVIGGKDKVELPAGGSIVFAGDAGTKFKISVQ 709 + V++ ++ +FAVY+ KGT ++V+ G ++V+LPA G++VFAG G+ F I++Q Sbjct: 636 MTVTLPAEGAFAVYDEKGTVVNYTVVSGSNEVKLPANGAVVFAGAPGSAFGITLQ 690 >A3IBK9.1 A3IBK9_9BACI Penicillin-binding protein Length = 673 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/667 (52%), Positives = 476/667 (71%), Gaps = 3/667 (0%) Query: 45 SNKAVITYEATRKAAQEKADLLTKTYGTNSVQYAIIDHGNIVVSGQSGKNDEQGQKPLTK 104 +N +T+EAT++ EKA LLT+TYG S+QYA+ID G IV+SG +GKND G +PLT Sbjct: 7 NNSGSLTFEATKEVGIEKAKLLTETYGATSLQYALIDDGEIVISGHAGKNDLNGNRPLTA 66 Query: 105 ETMYGIGSTSKMFTAVAAMQLAEQGKINLDTPVVQYIPEFKMKDERYKQITPRMXXXXXX 164 TMYGIGSTSKM A M+L ++GK+ LD PVV YIP+FKMKD+RYKQITPRM Sbjct: 67 NTMYGIGSTSKMMLTAAVMKLVDEGKVELDLPVVNYIPDFKMKDDRYKQITPRMLLNHSS 126 Query: 165 XXXXXXXTNAFLFEDNDTYAHDTLLGQLAGQTLKAAPGAYSVYCNDGFTLAQILVERVSG 224 N FL++DND+YA+D+LL LA Q LKA PGA+SVYCNDGFTLA+IL+ERVSG Sbjct: 127 GLLGTSSLNTFLYDDNDSYAYDSLLEHLATQNLKADPGAFSVYCNDGFTLAEILIERVSG 186 Query: 225 MDFTSYIHRYITEPLGMAHTKTPLDSLSTAKMAGLYYPAYRGQLPNETSNVIGAGGIYST 284 M FT++I +Y+TEPL M+HTKTP + + ++K+AG+Y PAY GQLP E +N+I GGIYST Sbjct: 187 MSFTAFISKYLTEPLEMSHTKTPKNLVDSSKLAGIYSPAYNGQLPAENTNIIATGGIYST 246 Query: 285 AEDLVRFSQIFTGKAEGILSGKSSAAMAQDEYKTPLWPDDEASSFDYGYGLGWDNVNLYP 344 AEDLV+FSQIFTG+ IL+ +S AMAQDEYK +WP++ SF YGLGWD+V L+P Sbjct: 247 AEDLVKFSQIFTGQVSDILTRESVKAMAQDEYKRGMWPEEADPSF-VAYGLGWDSVRLFP 305 Query: 345 FNEYGMKALTKGGDTILYHSSLVVLPEQDMAAAVITSGGSSTADRLMANEVLLQALKEKG 404 F+EYG+KALTKGGDT+ YHSSLVVLPE +MAAAV++SGG S D+L+ANE+LL AL+EKG Sbjct: 306 FSEYGIKALTKGGDTLSYHSSLVVLPEYNMAAAVVSSGGQSLLDQLLANEILLSALQEKG 365 Query: 405 TISEFKPEKSYGAPVKADMPESVLQYSGIYGATNTTV-NIDITKGGILSITSEQSPGTPA 463 I E KP+KS+G P+KA MP+ + Q++GIYG ++ + ++I G LS++ P P Sbjct: 366 IIHEQKPKKSHGVPIKAKMPQELSQHAGIYGGISSALMKVEINSHGELSVSMLTVPNNPI 425 Query: 464 QTFGYSADGTFRSADGNTKLSFVTEENGRTYLWIRQYASLPGLGQMSASVYNAEKLQPQD 523 QT+ Y+ADG+F + +G K+ F+ E+NG TYLW Y ++PGL Q + S Y AEKL+ Sbjct: 426 QTYSYTADGSFVNKEGTEKIKFIEEKNGHTYLWSSLYFNVPGLPQTAVSEYKAEKLEANI 485 Query: 524 LPAQTKEAWIQRDGKKYYLLNEKYTSLVYLMMQP-IQLNVSKQLPGYVLDKRITGPNTAV 582 L W +R+G+KYYL+NEKY+S++Y P + ++ K +PGY+L +I G N AV Sbjct: 486 LTKDIASVWEKREGEKYYLMNEKYSSMLYTNSAPTVTIDTIKDVPGYLLTNKIIGANQAV 545 Query: 583 SELQIPGMSGRDLSGYTFFTQDGVEYLDLGGSILVNEAAVKPIYVAKKSTVTIPPSGYAR 642 ++LQIPGM+GRD FF ++GVEY + G + +E VKP+Y K+S TI G+A+ Sbjct: 546 NQLQIPGMAGRDTMEIEFFKKNGVEYFTVAGGLYGHEELVKPLYPGKQSVTTIQADGHAK 605 Query: 643 WYTISDKDGGKTVKVSMSSDASFAVYNAKGTCSYFSVIGGKDKVELPAGGSIVFAGDAGT 702 W+ + K + V M S+ SFAVY+ G C ++V+ G ++V LP G +VFAG+ Sbjct: 606 WFLVPTNAKEKIMTVKMPSNGSFAVYDQAGNCVNYTVVSGINEVLLPENGRVVFAGEVDA 665 Query: 703 KFKISVQ 709 KF+IS++ Sbjct: 666 KFEISLK 672 >C2YJZ6.1 C2YJZ6_BACCE Putative uncharacterized protein Length = 695 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/695 (52%), Positives = 481/695 (69%), Gaps = 23/695 (3%) Query: 30 SSVPLTVLTAEMDLP--------SNKAVITYEAT-----RKAAQEKADLLTKTYGTNSVQ 76 + V T L M LP S V+T E +K A EKADLLTK++G SVQ Sbjct: 7 TGVLATALAVTMILPTGAKAFSESKTTVVTGEEVVSQELKKIAAEKADLLTKSHGAASVQ 66 Query: 77 YAIIDHGNIVVSGQSGKNDEQGQKPLTKETMYGIGSTSKMFTAVAAMQLAEQGKINLDTP 136 YA+ID+G +++SGQ+GKND +G+KPLTK+T+YGIGS SKM+ A M+L ++GK++LD P Sbjct: 67 YALIDNGKLILSGQAGKNDMEGEKPLTKDTLYGIGSVSKMYATAAVMKLVDEGKVDLDAP 126 Query: 137 VVQYIPEFKMKDERYKQITPRMXXXXXXXXXXXXXTNAFLFEDNDTYAHDTLLGQLAGQT 196 VV+Y+P+FKMKD RYK+ITPRM NAFLF DNDTYAHDTLL QL+ Q Sbjct: 127 VVRYVPDFKMKDGRYKRITPRMLLNHSSGLQGSTLGNAFLFNDNDTYAHDTLLQQLSNQN 186 Query: 197 LKAAPGAYSVYCNDGFTLAQILVERVSGMDFTSYIHRYITEPLGMAHTKTPLDSLSTAKM 256 LKA PGA+SVYCNDGFTLA+ILVERVSGM FT ++H+ TEPL M HTKTP D Sbjct: 187 LKADPGAFSVYCNDGFTLAEILVERVSGMSFTEFLHQNFTEPLKMNHTKTPQDKWRDENR 246 Query: 257 AGLYYPAYRGQLPNETSNVIGAGGIYSTAEDLVRFSQIFTGKAEGILSGKSSAAMAQDEY 316 AGLYYPAY+GQLP E+ NVIG GGI STAED+VRFSQ+F G+ +GILS K AM Q+EY Sbjct: 247 AGLYYPAYQGQLPIESVNVIGTGGISSTAEDMVRFSQLFMGQGKGILSDKVVKAMEQEEY 306 Query: 317 KTPLWPDDEASSFDYGYGLGWDNVNLYPFNEYGMKALTKGGDTILYHSSLVVLPEQDMAA 376 K +WP + F+ YGLGWD+V LYPF+EYG+KAL KGGDT L H+ LVVLPEQ +AA Sbjct: 307 KKGMWPGAGENIFN--YGLGWDSVKLYPFSEYGIKALAKGGDTALQHAILVVLPEQKIAA 364 Query: 377 AVITSGGSSTADRLMANEVLLQALKEKGTISEFKPEKSYGAPVKADMPESVLQYSGIYGA 436 AV+TSGG S+ ++LMA E+LL LKEKGTI E KP KS+G PVK MP+ V + +G YG Sbjct: 365 AVLTSGGRSSTNQLMATELLLATLKEKGTIKEIKPNKSFGKPVKVKMPQGVAKKAGFYGN 424 Query: 437 TNTTVNIDITKGGILSITSEQSPGTPAQTFGYSADGTFRSADGNTKLSFVTEENGRTYLW 496 + T I+ITK G L + P P + + Y+ADG+F + G +KL+FVTE+NGRTYL Sbjct: 425 SETHFKIEITKNGELFL-----PSNPEEKYVYTADGSFINEGGTSKLNFVTEKNGRTYLK 479 Query: 497 IRQYASLPGLGQMSASVYNAEKLQPQDLPAQTKEAWIQRDGKKYYLLNEKYTSLVYLMMQ 556 Y S PGLGQ + Y AEKL+ L +T AW++R+G K+Y +NEK++S+ YL+ Sbjct: 480 ESAYKSHPGLGQSVMTHYLAEKLEDNVLSKKTAAAWVKREGVKFYRVNEKFSSIQYLVQS 539 Query: 557 P---IQLNVSKQLPGYVLDKRITGPNTAVSELQIPGMSGRDLSGYTFFTQDGVEYLDLGG 613 Q+ + GY ++ITGPNTAV ++Q+P M+GRD + F+T+ G EY+++ G Sbjct: 540 KHLSTQITRKEGPAGYWDGRKITGPNTAVHQIQVPVMNGRDTTETHFYTEGGNEYMEMAG 599 Query: 614 SILVNEAAVKPIYVAKKSTVTIPPSGYARWYTISDKDGGKTVKVSMSSDASFAVYNAKGT 673 + V+E+ VKPI V + S VT+ +G+A+W+TI K + V++ S+ SFAVY+ KG Sbjct: 600 LLYVSESNVKPIDVGQSSKVTLGANGHAKWFTIPQAATDKRMTVTLPSNGSFAVYDEKGV 659 Query: 674 CSYFSVIGGKDKVELPAGGSIVFAGDAGTKFKISV 708 C F+++ G +KVELP G+IVFAG ++F ISV Sbjct: 660 CVNFTIVSGNNKVELPKNGTIVFAGAPKSEFAISV 694 >C2RQ74.1 C2RQ74_BACCE Putative uncharacterized protein Length = 695 Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/656 (54%), Positives = 468/656 (71%), Gaps = 10/656 (1%) Query: 56 RKAAQEKADLLTKTYGTNSVQYAIIDHGNIVVSGQSGKNDEQGQKPLTKETMYGIGSTSK 115 +K A EKA+LLTK++G SVQYA+ID+G +++SGQ+GKND +G+KPLTK+T+YGIGS SK Sbjct: 46 KKIAAEKAELLTKSHGAASVQYALIDNGKLILSGQAGKNDMEGEKPLTKDTLYGIGSVSK 105 Query: 116 MFTAVAAMQLAEQGKINLDTPVVQYIPEFKMKDERYKQITPRMXXXXXXXXXXXXXTNAF 175 M+ A M+L ++GK++LD PVV+Y+P+FKMKD RYK+ITPRM NAF Sbjct: 106 MYATAAVMKLVDEGKVDLDAPVVRYVPDFKMKDGRYKRITPRMLLNHSSGLQGSTLGNAF 165 Query: 176 LFEDNDTYAHDTLLGQLAGQTLKAAPGAYSVYCNDGFTLAQILVERVSGMDFTSYIHRYI 235 LF DNDTYAHDTLL QL+ Q LKA PGA+SVYCNDGFTLA+ILVERVSGM FT ++H+ Sbjct: 166 LFNDNDTYAHDTLLQQLSNQNLKADPGAFSVYCNDGFTLAEILVERVSGMSFTEFLHQNF 225 Query: 236 TEPLGMAHTKTPLDSLSTAKMAGLYYPAYRGQLPNETSNVIGAGGIYSTAEDLVRFSQIF 295 TEPL M HTKTP D AGLYYPAY+GQLP E+ NVIG GGI STAED+VRFSQ+F Sbjct: 226 TEPLKMNHTKTPQDKWRDENRAGLYYPAYQGQLPIESVNVIGTGGISSTAEDMVRFSQLF 285 Query: 296 TGKAEGILSGKSSAAMAQDEYKTPLWPDDEASSFDYGYGLGWDNVNLYPFNEYGMKALTK 355 G+ +GILS K AM Q+EYK +WP + F+ YGLGWD+V LYPF+EYG+KAL K Sbjct: 286 MGQGKGILSDKVVKAMEQEEYKKGMWPGAGENIFN--YGLGWDSVKLYPFSEYGIKALAK 343 Query: 356 GGDTILYHSSLVVLPEQDMAAAVITSGGSSTADRLMANEVLLQALKEKGTISEFKPEKSY 415 GGDT L H+ LVVLPEQ +AAAV+TSGG S+ ++LMA E+LL LKEKGTI E KP KS+ Sbjct: 344 GGDTALQHAILVVLPEQKIAAAVLTSGGRSSTNQLMATELLLATLKEKGTIKEIKPNKSF 403 Query: 416 GAPVKADMPESVLQYSGIYGATNTTVNIDITKGGILSITSEQSPGTPAQTFGYSADGTFR 475 G PVK MP+ V + +G YG + T I+IT G L + P P + + Y+ADG+F Sbjct: 404 GKPVKVKMPQGVAKKAGFYGNSETHFKIEITNNGELFL-----PSNPEEKYVYTADGSFI 458 Query: 476 SADGNTKLSFVTEENGRTYLWIRQYASLPGLGQMSASVYNAEKLQPQDLPAQTKEAWIQR 535 + G +KL+FVTE+NGRTYL Y S PGLGQ + Y AEKL+ L +T AW++R Sbjct: 459 NEGGTSKLNFVTEKNGRTYLKESAYKSYPGLGQSVMTHYLAEKLEDNVLSKKTAAAWVKR 518 Query: 536 DGKKYYLLNEKYTSLVYLMMQP---IQLNVSKQLPGYVLDKRITGPNTAVSELQIPGMSG 592 +G K+Y +NEK++S+ YL+ Q+ + GY ++ITGPNTAV ++Q+P M+G Sbjct: 519 EGVKFYRVNEKFSSIQYLVQSKHLSTQITRKEGPAGYWDGRKITGPNTAVHQIQVPVMNG 578 Query: 593 RDLSGYTFFTQDGVEYLDLGGSILVNEAAVKPIYVAKKSTVTIPPSGYARWYTISDKDGG 652 RD + F+T+ G EY+++ G + V+E+ VKPI V + S VT+ +G+A+W+TI Sbjct: 579 RDTTETHFYTEGGNEYMEMAGLLYVSESNVKPIDVGQSSKVTLGANGHAKWFTIPQAATD 638 Query: 653 KTVKVSMSSDASFAVYNAKGTCSYFSVIGGKDKVELPAGGSIVFAGDAGTKFKISV 708 K + V++ S+ SFAVY+ KG C F+++ G +KVELP G+IVFAG ++F ISV Sbjct: 639 KRMTVTLPSNGSFAVYDEKGVCVNFTIVSGNNKVELPKNGTIVFAGAPKSEFAISV 694 >C3FM79.1 C3FM79_BACTB Putative uncharacterized protein Length = 695 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/695 (52%), Positives = 478/695 (68%), Gaps = 23/695 (3%) Query: 30 SSVPLTVLTAEMDLP--------SNKAVITYEAT-----RKAAQEKADLLTKTYGTNSVQ 76 + V T L M LP S V+T E +K A EKA+LLTK++G SVQ Sbjct: 7 TGVLATALVVTMILPTGAKAFSESKTTVVTGEEVASQELKKIAAEKAELLTKSHGAASVQ 66 Query: 77 YAIIDHGNIVVSGQSGKNDEQGQKPLTKETMYGIGSTSKMFTAVAAMQLAEQGKINLDTP 136 YA+ID+G +++SGQ+GKND +G+KPLTK+T+YGIGS SKM+ A M+L ++GK++LD P Sbjct: 67 YALIDNGKLILSGQAGKNDMEGEKPLTKDTLYGIGSVSKMYATAAVMKLVDEGKVDLDAP 126 Query: 137 VVQYIPEFKMKDERYKQITPRMXXXXXXXXXXXXXTNAFLFEDNDTYAHDTLLGQLAGQT 196 VV+Y+P+FKMKD RYK+ITPRM NAFLF DNDTYAHDTLL QL+ Q Sbjct: 127 VVRYVPDFKMKDGRYKRITPRMLLNHSSGLQGSTLGNAFLFNDNDTYAHDTLLQQLSNQN 186 Query: 197 LKAAPGAYSVYCNDGFTLAQILVERVSGMDFTSYIHRYITEPLGMAHTKTPLDSLSTAKM 256 LKA PGA+SVYCNDGFTLA+ILVERVSGM FT ++H+ T PL M HTKTP D Sbjct: 187 LKADPGAFSVYCNDGFTLAEILVERVSGMSFTEFLHQNFTGPLKMNHTKTPQDKWRDENR 246 Query: 257 AGLYYPAYRGQLPNETSNVIGAGGIYSTAEDLVRFSQIFTGKAEGILSGKSSAAMAQDEY 316 AGLYYPAY+GQLP E+ NVIG GGI STAED+VRFSQ+F G+ +GILS K AM Q+EY Sbjct: 247 AGLYYPAYQGQLPIESVNVIGTGGISSTAEDMVRFSQLFMGQGKGILSDKVVKAMEQEEY 306 Query: 317 KTPLWPDDEASSFDYGYGLGWDNVNLYPFNEYGMKALTKGGDTILYHSSLVVLPEQDMAA 376 K +WP + F+ YGLGWD+V LYPF+EYG+KAL KGGDT L H+ LVVLPEQ +AA Sbjct: 307 KKGMWPGAGENIFN--YGLGWDSVKLYPFSEYGIKALAKGGDTALQHAILVVLPEQKIAA 364 Query: 377 AVITSGGSSTADRLMANEVLLQALKEKGTISEFKPEKSYGAPVKADMPESVLQYSGIYGA 436 AV+TSGG S+ ++LMA E+LL LKEKG I E KP KS+G PVK MP+ V + +G YG Sbjct: 365 AVLTSGGRSSTNQLMATELLLATLKEKGIIKEIKPNKSFGKPVKVKMPQGVAKKAGFYGN 424 Query: 437 TNTTVNIDITKGGILSITSEQSPGTPAQTFGYSADGTFRSADGNTKLSFVTEENGRTYLW 496 + T I+ITK G L + P P + + Y+ADG+F + G +KL+FVTE+NGRTYL Sbjct: 425 SETHFKIEITKNGELFL-----PSNPEEKYVYTADGSFINEGGTSKLNFVTEKNGRTYLK 479 Query: 497 IRQYASLPGLGQMSASVYNAEKLQPQDLPAQTKEAWIQRDGKKYYLLNEKYTSLVYLMMQ 556 Y S PGLGQ + Y AEKL+ L +T AW +R+G K+Y +NEK++S+ YL+ Sbjct: 480 ESAYKSHPGLGQSVMTHYLAEKLEDNVLSKKTAAAWAKREGVKFYRVNEKFSSIQYLVQS 539 Query: 557 P---IQLNVSKQLPGYVLDKRITGPNTAVSELQIPGMSGRDLSGYTFFTQDGVEYLDLGG 613 Q+ + GY ++ITGPNTAV ++Q+P M+GRD + F+T+ G EY+++ G Sbjct: 540 KHLSTQITRKEGPAGYWDGRKITGPNTAVHQIQVPVMNGRDTTETHFYTEGGNEYMEMAG 599 Query: 614 SILVNEAAVKPIYVAKKSTVTIPPSGYARWYTISDKDGGKTVKVSMSSDASFAVYNAKGT 673 + V+E+ VKPI V + S VT+ +G+A+W+TI K + V++ S+ SFAVY+ KG Sbjct: 600 LLYVSESNVKPIDVGQSSKVTLDANGHAKWFTIPQAATDKRMTVTLPSNGSFAVYDEKGV 659 Query: 674 CSYFSVIGGKDKVELPAGGSIVFAGDAGTKFKISV 708 C F+++ G +KVELP G+IVFAG ++F ISV Sbjct: 660 CVNFTIVSGNNKVELPKNGTIVFAGAPKSEFAISV 694 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.130 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,202,386,633 Number of extensions: 177490915 Number of successful extensions: 400528 Number of sequences better than 1.0e-05: 1371 Number of HSP's gapped: 399356 Number of HSP's successfully gapped: 1380 Length of query: 709 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 566 Effective length of database: 1,713,491,058 Effective search space: 969835938828 Effective search space used: 969835938828 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 135 (56.6 bits)