BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0024.p (229 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6TU19.1 A6TU19_ALKMQ Putative uncharacterized protein 84 7e-15 A3I723.1 A3I723_9BACI Putative uncharacterized protein 77 1e-12 B1HMQ8.1 B1HMQ8_LYSSC Putative uncharacterized protein 75 6e-12 B1HPZ1.1 B1HPZ1_LYSSC Putative uncharacterized protein 74 8e-12 Q67N14.1 Q67N14_SYMTH Putative uncharacterized protein 69 3e-10 >A6TU19.1 A6TU19_ALKMQ Putative uncharacterized protein Length = 260 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 35/244 (14%) Query: 4 KVKSFIFGF----FACLLITGTSAYAMEPTMAGIYLRKITYMFDGIEKKPPQGSEG---- 55 K+K F+ GF CLL A + ++ +Y I + DG + + S G Sbjct: 6 KIKGFVSGFTVAILICLLTVSAFASPVRKSIEVMY-NDIKLVVDGQRVQFGRDSVGNQIQ 64 Query: 56 -FIYQGSIYVPLRFVSKSLNKDIEWDDAKSTVWIGK-----------GNADDYFSHQIPT 103 FIY G+ Y+P++ V ++LNK++EWD TV+IGK GN D+ S ++ Sbjct: 65 PFIYNGTTYLPVKAVGEALNKNVEWDGQTQTVYIGKKTLFEEEVVFIGNGIDHMSFEMNR 124 Query: 104 RVEGDLKFEIGVA-----NIGGNKYSH------RGYKVSFPEKSNQ-GMLQFNLAGQYSK 151 + +LK+E + NI NKY++ Y + ++ N + F L Y + Sbjct: 125 GNKSNLKYEYNITMPVEDNI-RNKYNNYLFIPIESYSIWGADRYNAWSKIDFPLNAGYKE 183 Query: 152 FDGFLGIDDSTKNSTALGTLKIIGDNRELLSFTNLKGGDQPKRFEVDLSGVSTLQILYTR 211 F LGI ++ K+ +KI D+R L+ LK GD P+ V+++G L I T Sbjct: 184 FKATLGIPNNYKDEFGTKDIKIYADDR-LVYEKTLKQGDMPEEITVNVAGALKLTIQITT 242 Query: 212 DTGS 215 D G+ Sbjct: 243 DDGT 246 >A3I723.1 A3I723_9BACI Putative uncharacterized protein Length = 230 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 51/239 (21%) Query: 9 IFGFFACLLITGTSAYAMEPTMAGIYLRKIT-------YMFDGIEKKPPQGSEGFIYQGS 61 I + ++ G + + T A L+KI Y D +EKKP +G GFIY+G+ Sbjct: 7 ITSYLGFFILGGLTFTYLSTTEAASSLKKINVSQDTIHYYVDKVEKKPKEGQSGFIYEGT 66 Query: 62 IYVPLRFVSKSLNKDIEWDDAKSTVWIGK-------------GNADDYFSHQ-----IPT 103 YVP+RF+++SL K++ WD +++IG G+ +D+F H I T Sbjct: 67 TYVPMRFIAESLGKNVTWDGKSKSIYIGDAPTFISLKDVKPIGSDEDHFFHNPSSIVIST 126 Query: 104 RVEGDLKFEIGVANIGGNKYSHRGYKVSFPEKSNQGMLQFNLAGQYSKFDGFLG-IDDST 162 + + +++G + GG H +++ G+Y F+ +L + Sbjct: 127 GEKFEQSYQLGGYHGGGAVQDH--------------TVEYMANGKYKSFETYLAPVKKLA 172 Query: 163 KNSTALGTLKIIGDNR----------ELLSFTNLKGGDQPKRFEVDLSGVSTLQILYTR 211 S +G +KI DN+ ++ NL+G + K FE++ SG+ L +T+ Sbjct: 173 AGSFGIGYMKIYADNKLIYDSGSIKDKVKVNVNLEGASKVK-FEIEGSGLGILDPKFTQ 230 >B1HMQ8.1 B1HMQ8_LYSSC Putative uncharacterized protein Length = 230 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 43/232 (18%) Query: 8 FIFGFFACLLITGTSAYAMEPTMAGIYLRKITYMFDGIEKKPPQGSEGFIYQGSIYVPLR 67 FI G ++ T A A +Y I Y D +EKKP +G GFIY+G+ YVP+R Sbjct: 14 FILGGLTFTYLSTTDA-ASSLKKINVYQDTIHYYVDKVEKKPQEGQSGFIYEGTTYVPMR 72 Query: 68 FVSKSLNKDIEWDDAKSTVWIGK-------------GNADDYFSHQ-----IPTRVEGDL 109 F+++SL K++ WD +V+IG G+ +D+F H I T + + Sbjct: 73 FIAESLGKNVTWDGKSKSVYIGDVPKFISLKDVKPIGSDEDHFFHNPSSIVISTGEKFEQ 132 Query: 110 KFEIGVANIGGNKYSHRGYKVSFPEKSNQGMLQFNLAGQYSKFDGFLG-IDDSTKNSTAL 168 +++G + GG H +++ + G+Y F+ L + S + Sbjct: 133 SYQLGGFHGGGAVQDH--------------TVEYLVNGKYKTFETSLTPVKKLAAGSFGI 178 Query: 169 GTLKIIGDNRELLSFTNLK---------GGDQPKRFEVDLSGVSTLQILYTR 211 G +KI DN+ + ++K G +FE++ SG+ L +T+ Sbjct: 179 GYMKIYADNKLIYDSGSIKEKVKVNVNLDGASKVKFEMEGSGLGILDPKFTQ 230 >B1HPZ1.1 B1HPZ1_LYSSC Putative uncharacterized protein Length = 238 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 23/198 (11%) Query: 46 EKKPPQGSEGFIYQGSIYVPLRFVSKSLNKDIEWDDAKSTVWIGK---------GNADDY 96 E KP F Y G+ YVPLRF+S+ L +EWD A T+ IGK G DY Sbjct: 49 ENKP------FTYNGTTYVPLRFISEQLGSPVEWDSANQTINIGKTSEKSAFYPGRDLDY 102 Query: 97 FSHQIPTRVEGDLKFEIGVANIG---GNKYSHRGYKVSFPEKSNQ-GMLQFNLAGQYSKF 152 + Q + I GN YS+ +S + +Q +L+F L GQ++ F Sbjct: 103 MNFQSEVGFSDLYSYSFNQKTISDNIGNDYSNY-ITISANYRGDQWSLLEFPLNGQFNTF 161 Query: 153 DGFLGIDDSTKNSTALGTLKIIGDNRELLSFTNLKGGDQPKRFEVDLSGVSTL--QILYT 210 G+ + +KN + L++ D + ++T + G+ PK E+ L G + + +++ Sbjct: 162 KTIFGLTEKSKNISTELKLEVYLDEKLQETYT-ISAGEMPKNIELKLKGANKIGFKLIKK 220 Query: 211 RDTGSDLTIDIADAILHH 228 TG+D T+ + DA + Sbjct: 221 ERTGNDATVGLFDARFYK 238 >Q67N14.1 Q67N14_SYMTH Putative uncharacterized protein Length = 253 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 38/235 (16%) Query: 1 MLGKVKSFIFGFFACLLITGTSAYAMEPTMAGIYLRKITYMFDGIEKKPPQGSEGFIYQG 60 M+G V F+ A +L G + A ++ R + Y+FDGIE+ P G GFIYQ Sbjct: 6 MMGFVAGFVT---AAVLFGGLAVAAGYERQITVHFRPLKYVFDGIERTPQGGEAGFIYQN 62 Query: 61 SIYVPLRFVSKSLNKDIEWDDAKSTVWIG--KGNADDYFSHQIPTRVEGDLKF------- 111 YVPLRF+++SL + +E+ D T+++G G + + +++ + EG K Sbjct: 63 RTYVPLRFIAESLGRPVEFVDG--TIYVGAIPGKTPEVW-NRLTEQGEGSFKVQFFADRA 119 Query: 112 ------EIGVANI------GGNKYSHRGYKVSFPEKSNQGMLQFNLAGQYSKFDGFLGID 159 E+ A + GG+ RG ++Q ++L + G L + Sbjct: 120 LSLQGEEMPAATVVTLVAPGGDVEDKRGV-------TSQLWADYDLPAGVGRMSGTLYVP 172 Query: 160 DS---TKNSTALGTLKIIGD-NRELLSFTNLKGGDQPKRFEVDLSGVSTLQILYT 210 +G L ++ + NR + + +L P F V L GV ++I+ T Sbjct: 173 HQYFGLAGERRVGRLVVLNELNRPIYTSPDLTTKSDPVPFSVPLDGVKRVRIVVT 227 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.139 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,443,206,973 Number of extensions: 63891252 Number of successful extensions: 109104 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 109118 Number of HSP's successfully gapped: 8 Length of query: 229 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 98 Effective length of database: 1,826,543,238 Effective search space: 179001237324 Effective search space used: 179001237324 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)