BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0010.p (249 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z9Y1.1 C0Z9Y1_BREBN Putative uncharacterized protein 379 e-103 C1S166.1 C1S166_9SPHI Putative uncharacterized protein 265 2e-69 B5I4U9.1 B5I4U9_9ACTO Short-chain dehydrogenase/reductase SDR 259 2e-67 A9HQ31.1 A9HQ31_GLUDA Putative uncharacterized protein 249 1e-64 C1RYD9.1 C1RYD9_9SPHI Putative uncharacterized protein 242 2e-62 >C0Z9Y1.1 C0Z9Y1_BREBN Putative uncharacterized protein Length = 246 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 180/244 (73%), Positives = 205/244 (84%) Query: 6 QIERGHSFKGKRVVVLGGTSGIGFATAEAAAREGSSLVVVSSQKERADRAVSRLPEGTEG 65 +E S KGKRV++LGGTSG+GFATAEAAAREG+ +VVVSS+KER D AVSRLP+GTEG Sbjct: 3 NLELCSSLKGKRVILLGGTSGMGFATAEAAAREGAYVVVVSSRKERVDDAVSRLPKGTEG 62 Query: 66 YAVDLTNEEQVRQFFSEIGEFDHLVFTAGDPLMVESLDVINVDTAHRLFNVRYWGAFMAA 125 Y VDL+NEEQ+R FFS IGEFDHLVFTAG+P E+L+ +++D A + F +RYWGA MAA Sbjct: 63 YVVDLSNEEQIRVFFSRIGEFDHLVFTAGEPFQPENLNTVDMDKARQFFTIRYWGAVMAA 122 Query: 126 KYGSRNIRQGGSITLTSGVVGVRPQKGFTVAASICGAVESLTRALAVELSPLRVNAVCFG 185 KYGS IRQ GS+ SG VRP KG T+AASICGA+ESLTRALAVELSPLRVNA+ FG Sbjct: 123 KYGSEKIRQNGSMIFASGTASVRPPKGLTIAASICGAIESLTRALAVELSPLRVNAIRFG 182 Query: 186 LMRTELWDGIPEEHRNAMYENAGRSLPVGRVGEPEDGAEAFLYLMREKYSTGQIIVVDGG 245 MRTELWD IPEE RN MYE G+SLPVGRVGEPED AEAFLYLMREKYSTGQ+IVVDGG Sbjct: 183 FMRTELWDNIPEEERNTMYETVGKSLPVGRVGEPEDAAEAFLYLMREKYSTGQVIVVDGG 242 Query: 246 STLV 249 S+LV Sbjct: 243 SSLV 246 >C1S166.1 C1S166_9SPHI Putative uncharacterized protein Length = 246 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 123/245 (50%), Positives = 176/245 (71%) Query: 5 EQIERGHSFKGKRVVVLGGTSGIGFATAEAAAREGSSLVVVSSQKERADRAVSRLPEGTE 64 E+ + + +G+RV++LG +SGIG ATA AAA EG+ +V+VS ++R + A+ +LP G+E Sbjct: 2 EKQTKKQTLEGQRVIILGASSGIGLATAIAAAEEGAKVVIVSGNQQRINEALKQLPAGSE 61 Query: 65 GYAVDLTNEEQVRQFFSEIGEFDHLVFTAGDPLMVESLDVINVDTAHRLFNVRYWGAFMA 124 GYAVDL++EE +R FF G FDHL++TAG+ L ++ ++ N+ A R FNVRYWGAF A Sbjct: 62 GYAVDLSHEENIRAFFEGAGSFDHLIYTAGENLTLQEINKTNIADAQRFFNVRYWGAFAA 121 Query: 125 AKYGSRNIRQGGSITLTSGVVGVRPQKGFTVAASICGAVESLTRALAVELSPLRVNAVCF 184 KY + +IR+GGSI LT G G RP G+ VA+SIC A+E TRA+AVEL+ +RVN V Sbjct: 122 VKYAAPHIRKGGSINLTGGNSGQRPNAGWGVASSICMAMEGFTRAMAVELATVRVNLVAP 181 Query: 185 GLMRTELWDGIPEEHRNAMYENAGRSLPVGRVGEPEDGAEAFLYLMREKYSTGQIIVVDG 244 G++RT LW+G+PE R ++ G +L V RVG ED A+ F+Y+M++ ++TGQ++ VDG Sbjct: 182 GVVRTNLWNGMPEADRENIFTTLGNALLVKRVGVSEDIAQTFVYMMKQAFATGQVLTVDG 241 Query: 245 GSTLV 249 G LV Sbjct: 242 GGVLV 246 >B5I4U9.1 B5I4U9_9ACTO Short-chain dehydrogenase/reductase SDR Length = 250 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 127/240 (52%), Positives = 171/240 (71%) Query: 10 GHSFKGKRVVVLGGTSGIGFATAEAAAREGSSLVVVSSQKERADRAVSRLPEGTEGYAVD 69 G S +G+R+VV+GGTSGIG A A+AAAR+G+ +VV S +KE + A+ +LP G G +D Sbjct: 11 GMSLQGQRIVVVGGTSGIGLAVADAAARDGAEVVVASRRKESVEAALKQLPPGVSGDVLD 70 Query: 70 LTNEEQVRQFFSEIGEFDHLVFTAGDPLMVESLDVINVDTAHRLFNVRYWGAFMAAKYGS 129 +T+E V+ FF+ G FDHLVFTAG+PL E L ++ A R WGA KYG+ Sbjct: 71 VTSEAGVQAFFARTGAFDHLVFTAGEPLRFEPLAETDLARARNFLETRLWGALTVVKYGA 130 Query: 130 RNIRQGGSITLTSGVVGVRPQKGFTVAASICGAVESLTRALAVELSPLRVNAVCFGLMRT 189 +R+GGS+ LT+G V RP G +V A + GA+ESLTRALA+EL+P+RVN V G++RT Sbjct: 131 PLVREGGSVVLTTGTVARRPMPGTSVVAGLAGAMESLTRALALELAPVRVNVVEPGVVRT 190 Query: 190 ELWDGIPEEHRNAMYENAGRSLPVGRVGEPEDGAEAFLYLMREKYSTGQIIVVDGGSTLV 249 ELW +P+E R+ ++ A SLPVGRVGEPE+ AEA+LYLMR +STG ++VVDGG+ LV Sbjct: 191 ELWRELPKEERDGLFAAAAESLPVGRVGEPEEVAEAYLYLMRGGFSTGSVVVVDGGTVLV 250 >A9HQ31.1 A9HQ31_GLUDA Putative uncharacterized protein Length = 238 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 127/238 (53%), Positives = 174/238 (73%), Gaps = 1/238 (0%) Query: 13 FKGKRVVVLGGTSGIGFATAEAAAREGSSLVVVSSQKERADRAVSRLPEGTEGYAVDLTN 72 K KRVVVLGGTSGIG A AEAAA EG+ + + SS++ D A++RLP+GT+G+A+DL + Sbjct: 1 MKDKRVVVLGGTSGIGLAVAEAAAGEGARVSIASSRRSSVDAALARLPDGTDGHALDLRD 60 Query: 73 EEQVRQFFSEIGEFDHLVFTAGDPLMVESLDVINVDTAHRLFNVRYWGAFMAAKYGSRNI 132 E +V + F+ IG FDHLVFTAG+ L + + + + +A + F +RYWGA AAKY + I Sbjct: 61 EAEVSRLFAAIGPFDHLVFTAGESLRLGPIADMALPSARQFFELRYWGALTAAKYAAPLI 120 Query: 133 RQGGSITLTSGVVGVR-PQKGFTVAASICGAVESLTRALAVELSPLRVNAVCFGLMRTEL 191 + GGSI TSG+ G R PQ G+ + ASICGA+E LTRALA+EL+P+RVN V G ++T L Sbjct: 121 QPGGSIVFTSGIAGARPPQAGWALGASICGAMEGLTRALAIELAPIRVNIVVPGFVKTPL 180 Query: 192 WDGIPEEHRNAMYENAGRSLPVGRVGEPEDGAEAFLYLMREKYSTGQIIVVDGGSTLV 249 W+ IPEE+R MY LPVGR+GEP+D A A+++LM+++++TGQ V+DGG LV Sbjct: 181 WNDIPEENRETMYATVREKLPVGRIGEPDDLAAAYVFLMKQRFATGQSFVIDGGGLLV 238 >C1RYD9.1 C1RYD9_9SPHI Putative uncharacterized protein Length = 245 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 129/239 (53%), Positives = 174/239 (72%) Query: 11 HSFKGKRVVVLGGTSGIGFATAEAAAREGSSLVVVSSQKERADRAVSRLPEGTEGYAVDL 70 +S +GK+VV+LGGTSG+G ATA AAA EG+ +VVVS +E+ D A++ LPE + G+ DL Sbjct: 7 YSLEGKKVVLLGGTSGLGLATAVAAANEGALVVVVSGTREKVDEALAVLPENSAGFVADL 66 Query: 71 TNEEQVRQFFSEIGEFDHLVFTAGDPLMVESLDVINVDTAHRLFNVRYWGAFMAAKYGSR 130 +E QV F + GEFDHLVFTAGD L+ L +++D A + ++R+WGA MAAK+G+ Sbjct: 67 GDELQVAALFEKTGEFDHLVFTAGDALLFGELPGLDIDKAKQSIHLRFWGAIMAAKHGAP 126 Query: 131 NIRQGGSITLTSGVVGVRPQKGFTVAASICGAVESLTRALAVELSPLRVNAVCFGLMRTE 190 IR+GGSITLT+G +G RP+KG V A + A+E LTRALA++L+P+RVNAVC G +RT Sbjct: 127 LIRKGGSITLTTGALGRRPRKGTAVVAGMASAIEGLTRALAIDLAPIRVNAVCAGTVRTN 186 Query: 191 LWDGIPEEHRNAMYENAGRSLPVGRVGEPEDGAEAFLYLMREKYSTGQIIVVDGGSTLV 249 L + E R +E G+ L GRVG+ E+ AEA+LYLMR ++TGQI+VVDGGS LV Sbjct: 187 LLKHLCEADREDFFEQVGKKLLTGRVGDAENLAEAYLYLMRGAFTTGQILVVDGGSLLV 245 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,413,903,729 Number of extensions: 55462716 Number of successful extensions: 238281 Number of sequences better than 1.0e-05: 14575 Number of HSP's gapped: 229569 Number of HSP's successfully gapped: 14586 Length of query: 249 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 117 Effective length of database: 1,817,122,223 Effective search space: 212603300091 Effective search space used: 212603300091 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)