BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0598.0025.p (201 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q5WAK3.1 Q5WAK3_BACSK L-fuculose phosphate aldolase EC=4.1.2.17 212 2e-53 Q8ELH3.1 Q8ELH3_OCEIH L-fuculose-phosphate aldolase EC=4.1.2.17 207 6e-52 C0D8W0.1 C0D8W0_9CLOT Putative uncharacterized protein 164 6e-39 B9L191.1 B9L191_THERP Class II Aldolase and Adducin N-terminal d... 128 3e-28 A7FKD4.1 A7FKD4_YERP3 Class II aldolase/adducin N-terminal domai... 101 4e-20 >Q5WAK3.1 Q5WAK3_BACSK L-fuculose phosphate aldolase EC=4.1.2.17 Length = 218 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 107/201 (53%), Positives = 136/201 (67%), Gaps = 4/201 (1%) Query: 1 MMHYGLAWGNSGNISSRVDADSMLITGSGTYMGHLEDGDLVRVNISSGEYDAAGKRPSKE 60 MM LAWG +GNIS++ + D LI+ +GTY+G LE D GE+ AGK+PSKE Sbjct: 17 MMEKNLAWGTAGNISAKCE-DGYLISATGTYLGELEVEDFAYCQ--GGEH-LAGKKPSKE 72 Query: 61 IPMHAAIYEARPDAGFIIHASPFWTTLAACSDLQIESKLFVESMYYAERIAYVDYYHPGS 120 MH IYE RP+ G ++H+SPF++TL A SDL + S FVESMYY ERI + YY PGS Sbjct: 73 YVMHEGIYEQRPEIGAVLHSSPFYSTLIANSDLHLPSNYFVESMYYLERIVRIPYYQPGS 132 Query: 121 RELGEAVREKAKEANVIILKNHGIIVFDSSMKEARMGLETIEMTCRMAATMQMTGLTPTV 180 +EL +AV+E+AKEANV +L+NHGIIV D ++KEAR L+T+E T RM T G+T Sbjct: 133 KELAQAVKERAKEANVFLLENHGIIVCDVNLKEARTALQTLEYTARMRITALEKGITING 192 Query: 181 LKPETQQDFLQHSGYKPSRLW 201 L +T FL HSGYKP R W Sbjct: 193 LSDDTVHQFLHHSGYKPVRQW 213 >Q8ELH3.1 Q8ELH3_OCEIH L-fuculose-phosphate aldolase EC=4.1.2.17 Length = 214 Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 105/201 (52%), Positives = 134/201 (66%), Gaps = 4/201 (1%) Query: 1 MMHYGLAWGNSGNISSRVDADSMLITGSGTYMGHLEDGDLVRVNISSGEYDAAGKRPSKE 60 MM LAWG +GNIS+R D +I+ +GTY+G LE D GE+ GK+PSKE Sbjct: 16 MMDKDLAWGTAGNISAR-SGDGYIISATGTYLGELEVEDFSFC--KEGEH-VVGKKPSKE 71 Query: 61 IPMHAAIYEARPDAGFIIHASPFWTTLAACSDLQIESKLFVESMYYAERIAYVDYYHPGS 120 MH IYE RP+ ++HASPF++TL A SD+++ S FVESMYY ERI V +YHPGS Sbjct: 72 FLMHEWIYEERPEINAVLHASPFYSTLIANSDIELPSNYFVESMYYLERITRVPFYHPGS 131 Query: 121 RELGEAVREKAKEANVIILKNHGIIVFDSSMKEARMGLETIEMTCRMAATMQMTGLTPTV 180 +EL +AV+E+AK+ANV +L+NHGIIV D ++KEAR L+T+E T RM T + Sbjct: 132 KELAQAVKERAKDANVFLLENHGIIVCDVNLKEARTALQTLEYTARMHITALEKNININS 191 Query: 181 LKPETQQDFLQHSGYKPSRLW 201 L ET DFL HSGYKP R W Sbjct: 192 LSDETVYDFLHHSGYKPLRDW 212 >C0D8W0.1 C0D8W0_9CLOT Putative uncharacterized protein Length = 212 Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 84/195 (43%), Positives = 115/195 (58%), Gaps = 2/195 (1%) Query: 5 GLAWGNSGNISSRVDADSMLITGSGTYMGHLEDGDLVRVNISSGEYDAAGKRPSKEIPMH 64 GL WG SGNIS R + + IT SGT +G L + D++ V G A K+PSKE MH Sbjct: 19 GLTWGTSGNISVR-RQERIWITASGTRIGALTEEDIL-VCDPEGRVVAGRKKPSKETGMH 76 Query: 65 AAIYEARPDAGFIIHASPFWTTLAACSDLQIESKLFVESMYYAERIAYVDYYHPGSRELG 124 A+Y RPDA I+H SPF+TTL ACS + +++ LF+E+MYY ++A + YYH GS EL Sbjct: 77 LAVYRERPDAEGIVHCSPFYTTLCACSGIALKTNLFIEAMYYDRKVARIPYYHAGSSELA 136 Query: 125 EAVREKAKEANVIILKNHGIIVFDSSMKEARMGLETIEMTCRMAATMQMTGLTPTVLKPE 184 + + AKEA VI++ NHGI+ D ++EA M +E E C+M M G T Sbjct: 137 QGAAQAAKEAGVILMSNHGILTLDVCLEEAVMAVEITEQMCKMNVLASMGGFGLTETDSG 196 Query: 185 TQQDFLQHSGYKPSR 199 ++FL YK + Sbjct: 197 MVEEFLTGGYYKKVK 211 >B9L191.1 B9L191_THERP Class II Aldolase and Adducin N-terminal domain protein Length = 215 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 101/193 (52%), Gaps = 3/193 (1%) Query: 5 GLAWGNSGNISSRVDADSMLITGSGTYMGHLEDGDLVRVNISSGEYDAAGKRPSKEIPMH 64 G WG GN+S R LIT GT + L+ D V + GE D + S EI +H Sbjct: 22 GYLWGTGGNLSLRRSESHFLITMRGTALDQLDSQDFVLAPLQ-GERDEPPE-ASTEIQLH 79 Query: 65 AAIYEARPDAGFIIHASPFWTTLAACSDLQIESKLFVESMYYAERIAYVDYYHPGSRELG 124 IY+ARPD +IH SPF+TTL AC+DL++ + + E+ Y IA V Y PG+ EL Sbjct: 80 RRIYQARPDVRCVIHLSPFYTTLVACTDLELPTDIVPETALYLGEIARVPYIQPGTDELA 139 Query: 125 EAVREK-AKEANVIILKNHGIIVFDSSMKEARMGLETIEMTCRMAATMQMTGLTPTVLKP 183 AV E KE +V+I+ NHG++ S +A +E +E CRM T + GL + P Sbjct: 140 RAVAEALGKERSVVIMANHGVVTVGESPLDAFRRVEVLEFLCRMVVTARSAGLELHRIGP 199 Query: 184 ETQQDFLQHSGYK 196 + + G K Sbjct: 200 DAVASLRRSYGVK 212 >A7FKD4.1 A7FKD4_YERP3 Class II aldolase/adducin N-terminal domain protein Length = 231 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 6/171 (3%) Query: 1 MMHYGLAWGNSGNISSRVDADSMLITGSGTYMGHLEDGDLVRVNISSGEYDAAGKRPSKE 60 + GL+ G SGNIS ++ S L+T + + +G L+ L +++ +G +PSKE Sbjct: 34 LFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGELDSQTLSKLDAEGNHI--SGDKPSKE 91 Query: 61 IPMHAAIYEARPDAGFIIHA-SPFWTTLAACSDLQIESKLFVESMYYAERIA---YVDYY 116 +PMH A+Y AR G ++H SP+ T L+ +++ + L + YY RI + Y Sbjct: 92 VPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLLSYM 151 Query: 117 HPGSRELGEAVREKAKEANVIILKNHGIIVFDSSMKEARMGLETIEMTCRM 167 PG + A+ + A++ N ++L NHG +V S+++EA E +E T R+ Sbjct: 152 KPGDPAIATALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARL 202 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.132 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,176,078,994 Number of extensions: 44557676 Number of successful extensions: 109682 Number of sequences better than 1.0e-05: 896 Number of HSP's gapped: 109427 Number of HSP's successfully gapped: 901 Length of query: 201 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 72 Effective length of database: 1,845,385,268 Effective search space: 132867739296 Effective search space used: 132867739296 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)