BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0598.0009.p (390 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6LXG0.1 A6LXG0_CLOB8 Extracellular solute-binding protein, fami... 340 1e-91 A7VQM5.1 A7VQM5_9CLOT Putative uncharacterized protein 340 2e-91 A7VQN1.1 A7VQN1_9CLOT Putative uncharacterized protein 339 2e-91 Q65EZ8.1 Q65EZ8_BACLD Putative uncharacterized protein 310 1e-82 C5ETL4.1 C5ETL4_9FIRM Extracellular solute-binding protein 295 6e-78 >A6LXG0.1 A6LXG0_CLOB8 Extracellular solute-binding protein, family 1 Length = 417 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 169/350 (48%), Positives = 236/350 (67%), Gaps = 6/350 (1%) Query: 38 AEKVKLVLWHYY-----EKDIEDFVTKFNESQDEVEVTPSFVPFSDFKKQLTIGLSAGNL 92 A K + +WHY+ + +++ K+N+SQD+VEV FVP ++ KQ TIGL A L Sbjct: 39 AGKTTITVWHYFDGQQQQNAMQNLADKYNKSQDKVEVQVEFVPRAELTKQFTIGLVADKL 98 Query: 93 PDLVLVDNPDVAAFAAMGLFEDITDKVNAWADKDQFFEGPMKSGIYEGKNYSLPFVSNCL 152 PD+ LVDNPD+A+F+AMGLF DITDK+N++ KDQF+ GP+ S +GK Y +P SN L Sbjct: 99 PDIGLVDNPDMASFSAMGLFADITDKMNSYDGKDQFYPGPISSCQLDGKYYGIPLGSNDL 158 Query: 153 GLFYNKELLDQAGVNPPRTWDELKTTAKVLTKDGVHGFATSLLKGEEGTFNFYPWLIAAG 212 LFYNK++L AGV PP T+DELKT AK LTK +G A ++ K EEGTF + PWLI+ G Sbjct: 159 ALFYNKDMLSAAGVEPPTTFDELKTAAKKLTKGDTYGLAIAVPKNEEGTFQYLPWLISTG 218 Query: 213 GSPEKLNSPEVASAVDFLSGLLEDGSMSKEVINIGMSDIEKQFAAGKIAMMVNGPWQTTS 272 ++ S S++ +L+ L+++GSMSKEVIN +D+EKQF K AM+ +GPW + Sbjct: 219 AKFNEIGSEAGISSLQYLTDLIKNGSMSKEVINWTQNDLEKQFVTNKAAMITDGPWIIDT 278 Query: 273 IEKDNPELDFGIALIPQGKQNASVLGGENIGMIQGKNKEAAWKFISWALSADSVRSYAEV 332 ++KD P L++G+ IP+ K AS LGGEN G+I+G ++ AW FI + D++ Y Sbjct: 279 VKKDAPNLNWGVVKIPKDKVFASDLGGENWGIIKGHHEAEAWDFIKYTQQKDNMTEYCAD 338 Query: 333 SGAFPPRKDVA-ADKKYTEDPSLKVWMKQMESAMPRGPHAKWPELSTAMS 381 G P RKDVA +D K T+D + V++ +++ AMPRGPH KWPE+S AMS Sbjct: 339 FGYIPSRKDVAESDDKITKDQVMSVFLDELQYAMPRGPHPKWPEISDAMS 388 >A7VQM5.1 A7VQM5_9CLOT Putative uncharacterized protein Length = 428 Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 164/357 (45%), Positives = 240/357 (67%), Gaps = 6/357 (1%) Query: 30 NNASASAGAEKVKLVLWHYYEKD-----IEDFVTKFNESQDEVEVTPSFVPFSDFKKQLT 84 + A + A AE ++ +W+Y+E + ++ + ++N+SQD V V+ ++PF+DFKKQL+ Sbjct: 43 STAESQAPAEASEVDIWYYWETEKHQETLDRVIGEYNDSQDAVSVSAKYIPFADFKKQLS 102 Query: 85 IGLSAGNLPDLVLVDNPDVAAFAAMGLFEDITDKVNAWADKDQFFEGPMKSGIYEGKNYS 144 IG SA LPDLV++D+PD A++AAMG+F DI+DKV+ W DQ++EGP+ S + K Y Sbjct: 103 IGASAAELPDLVIIDSPDHASYAAMGIFADISDKVSDWDGIDQYYEGPLNSCKLDDKLYG 162 Query: 145 LPFVSNCLGLFYNKELLDQAGVNPPRTWDELKTTAKVLTKDGVHGFATSLLKGEEGTFNF 204 LPF SNCL LFYN+++L AG P TWDELK A+ T+ V GFA L+ EEGTFNF Sbjct: 163 LPFGSNCLALFYNEDMLADAGCEAPTTWDELKDVAQKTTQGNVTGFAMCCLQNEEGTFNF 222 Query: 205 YPWLIAAGGSPEKLNSPEVASAVDFLSGLLEDGSMSKEVINIGMSDIEKQFAAGKIAMMV 264 PWL + G + +N+ A+ + L++ GSMSKEVIN D+ QF +G IAMMV Sbjct: 223 TPWLWSTGATSYDINNDNGIKALTLVKDLVDAGSMSKEVINWTQGDVMNQFISGNIAMMV 282 Query: 265 NGPWQTTSIEKDNPELDFGIALIPQGKQNASVLGGENIGMIQGKNKEAAWKFISWALSAD 324 NGPWQ ++ + P+L++ + L+P+ + AS LGGEN G+I G N +AA F+ +A S D Sbjct: 283 NGPWQVPTMREQAPDLNWDVTLLPKDAEYASCLGGENFGVIDGDNVDAALDFLQFATSKD 342 Query: 325 SVRSYAEVSGAFPPRKDVAADKKYTEDPSLKVWMKQMESAMPRGPHAKWPELSTAMS 381 V SY + G RKDV A+ ++T+D +++ + ++M+ A PRGPHA+WPE+S A+S Sbjct: 343 EVASYIDDFGYIAARKDV-AEGQFTDDETMQKFTEEMQYAQPRGPHAQWPEISDALS 398 >A7VQN1.1 A7VQN1_9CLOT Putative uncharacterized protein Length = 428 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 164/357 (45%), Positives = 240/357 (67%), Gaps = 6/357 (1%) Query: 30 NNASASAGAEKVKLVLWHYYEKD-----IEDFVTKFNESQDEVEVTPSFVPFSDFKKQLT 84 + A + A AE ++ +W+Y+E + ++ + ++N+SQD V V+ ++PF+DFKKQL+ Sbjct: 43 STAESQAPAEASEVDIWYYWETEKHQETLDRVIGEYNDSQDAVSVSAKYIPFADFKKQLS 102 Query: 85 IGLSAGNLPDLVLVDNPDVAAFAAMGLFEDITDKVNAWADKDQFFEGPMKSGIYEGKNYS 144 IG SA LPDLV++D+PD A++AAMG+F DI+DKV+ W DQ++EGP+ S + K Y Sbjct: 103 IGASAAELPDLVIIDSPDHASYAAMGIFADISDKVSDWDGIDQYYEGPLNSCKLDDKLYG 162 Query: 145 LPFVSNCLGLFYNKELLDQAGVNPPRTWDELKTTAKVLTKDGVHGFATSLLKGEEGTFNF 204 LPF SNCL LFYN+++L AG P TWDELK A+ T+ V GFA L+ EEGTFNF Sbjct: 163 LPFGSNCLALFYNEDMLADAGCEAPTTWDELKDVAQKTTQGNVTGFAMCCLQNEEGTFNF 222 Query: 205 YPWLIAAGGSPEKLNSPEVASAVDFLSGLLEDGSMSKEVINIGMSDIEKQFAAGKIAMMV 264 PWL + G + +N+ A+ + L++ GSMSKEVIN D+ QF +G IAMMV Sbjct: 223 TPWLWSTGATSYDINNDNGIKALTLVKDLVDAGSMSKEVINWTQGDVMNQFISGNIAMMV 282 Query: 265 NGPWQTTSIEKDNPELDFGIALIPQGKQNASVLGGENIGMIQGKNKEAAWKFISWALSAD 324 NGPWQ ++ + P+L++ + L+P+ + AS LGGEN G+I G N +AA F+ +A S D Sbjct: 283 NGPWQVPTMREQAPDLNWDVTLLPKDAEYASCLGGENFGVIDGDNVDAALDFLQFATSKD 342 Query: 325 SVRSYAEVSGAFPPRKDVAADKKYTEDPSLKVWMKQMESAMPRGPHAKWPELSTAMS 381 V SY + G RKDV A+ ++T+D +++ + ++M+ A PRGPHA+WPE+S A+S Sbjct: 343 EVASYIDDFGYIAARKDV-AEGQFTDDETMQKFTEEMQYAQPRGPHAQWPEISDALS 398 >Q65EZ8.1 Q65EZ8_BACLD Putative uncharacterized protein Length = 404 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 150/356 (42%), Positives = 232/356 (65%), Gaps = 9/356 (2%) Query: 31 NASASAGAEKVKLVLWHYY---EKDI-EDFVTKFNESQDEVEVTPSFVPFSDFKKQLTIG 86 +++ + E++K+ W Y+ ++D+ + V ++N SQD +V ++PF++ KKQL++G Sbjct: 23 SSTGTKHTEEIKV--WDYFTGKQQDLYHELVEQYNRSQDRYKVVTEYIPFNEVKKQLSVG 80 Query: 87 LSAGNLPDLVLVDNPDVAAFAAMGLFEDITDKVNAWADKDQFFEGPMKSGIYEGKNYSLP 146 + +PD V +DN D A+FAAMG+ ED+T+K+ W DQF+EGP+ S YE K Y +P Sbjct: 81 TAGNAMPDAVFLDNVDNASFAAMGVLEDLTEKIEQWGQADQFYEGPLSSAGYEEKYYGIP 140 Query: 147 FVSNCLGLFYNKELLDQAGVN-PPRTWDELKTTAKVLTKDGVHGFATSLLKGEEGTFNFY 205 F SN L LFYNK+LL AG++ PP TW +LK A+ +K FA S +K EE F FY Sbjct: 141 FASNALALFYNKDLLKNAGISKPPETWSDLKKAAEKTSKGQTKRFALSAVKSEESAFQFY 200 Query: 206 PWLIAAGGSPEKLNSPEVASAVDFLSGLLEDGSMSKEVINIGMSDIEKQFAAGKIAMMVN 265 P+L+++G ++LNS E AS++ FL+ L++ G+MSKEV+N D+ +QFAAG++AMM+N Sbjct: 201 PFLLSSGADLKQLNSKEAASSLQFLTDLIKKGAMSKEVLNATQDDLARQFAAGQLAMMIN 260 Query: 266 GPWQTTSIEKDNPELDFGIALIPQGKQNASVLGGENIGMIQGKNKEAAWKFISWALSADS 325 G W +E + +L++GI IP+ + AS LGGENI +++GKN AW FISW + + Sbjct: 261 GSWNIERLE-EAEDLNYGITYIPKDQTFASALGGENIAVVKGKNTAGAWDFISWLIDPER 319 Query: 326 VRSYAEVSGAFPPRKD-VAADKKYTEDPSLKVWMKQMESAMPRGPHAKWPELSTAM 380 + + +G FPPRKD + + + D +LK ++ +E A RGP WP++S A+ Sbjct: 320 LETLTAETGVFPPRKDLLESSSHWKTDDNLKAFIPIIEIASARGPSKDWPKISEAL 375 >C5ETL4.1 C5ETL4_9FIRM Extracellular solute-binding protein Length = 418 Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 151/392 (38%), Positives = 232/392 (59%), Gaps = 28/392 (7%) Query: 1 MTMTIVSGCGSDSTDGNGSAVTDPPNVVKNNASASAGAEKVKLVLWHYYEKDIED----- 55 M ++V+GCGS + G G+ A+A G++K ++V+W Y+E D + Sbjct: 14 MAASLVTGCGSGTASGGGN----------TQAAADTGSKK-EVVIWDYFETDAQKAMMTT 62 Query: 56 FVTKFNESQDEVEVTPSFVPFSDFKKQLTIGLSAGNLPDLVLVDNPDVAAFAAMGLFEDI 115 + FN SQDE + +VPFSD++KQLT+G+++G LPDLV++D +A+F ++GLF DI Sbjct: 63 LLDGFNASQDEFVASHVYVPFSDYEKQLTLGIASGELPDLVILDGCSMASFISLGLFGDI 122 Query: 116 TDKVNAWADKDQFFEGPMKSGIYEGKNYSLPFVSNCLGLFYNKELLDQAGVNPP---RTW 172 +D W D++ GPM+S + +G++Y +PF +NC LFYNK++ D AG+ P TW Sbjct: 123 SDADIKW---DEYIAGPMESTMADGRHYGIPFATNCTALFYNKDMFDAAGLAYPDENTTW 179 Query: 173 DELKTTAKVLTKDGVHGFATSLLKGEEGTFNFYPWLIAAGGSPEKLNSPEVASAVDFLSG 232 D+ AK LTKDGV GF + +EGTF WL AGGS + A + + Sbjct: 180 DDFHEMAKALTKDGVTGFGNAATNTDEGTFQCLQWLYTAGGSYTDIKGG--TEAYELMQE 237 Query: 233 LLEDGSMSKEVINIGMSDIEKQFAAGKIAMMVNGPWQTTSIEKDNPELDFGIALIPQ--- 289 ++ DGS +KEV+N SD+ F AG +AM NGPWQ I KD P+L++G+ ++P+ Sbjct: 238 MISDGSWTKEVVNWTQSDVNNNFIAGNLAMQQNGPWQIPGIAKDAPDLNYGVTVLPKKDA 297 Query: 290 -GKQNASVLGGENIGMIQGKNKEAAWKFISWALSADSVRSYAEVSGAFPPRKDVAADKKY 348 Q S+LGGEN+G++ + A F+ + D + + G+FPP+ + A D + Sbjct: 298 ASGQATSILGGENMGVVAKDDTAGAVAFLKYYDQTDVMVEAMKQYGSFPPKTEAAKDAYW 357 Query: 349 TEDPSLKVWMKQMESAMPRGPHAKWPELSTAM 380 TEDP ++ Q+E+++PRGP A WP S+A+ Sbjct: 358 TEDPVQAEFITQLETSIPRGPSASWPSYSSAI 389 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,495,822,844 Number of extensions: 108284954 Number of successful extensions: 209965 Number of sequences better than 1.0e-05: 2872 Number of HSP's gapped: 207173 Number of HSP's successfully gapped: 2876 Length of query: 390 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 252 Effective length of database: 1,760,596,133 Effective search space: 443670225516 Effective search space used: 443670225516 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 132 (55.5 bits)