BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0596.0030.p (568 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D7X0.1 B1D7X0_9BACL Extracellular solute-binding protein family 1 683 0.0 B1DGY5.1 B1DGY5_9BACL Putative uncharacterized protein 670 0.0 B3KJH7.1 B3KJH7_9BACI Extracellular solute-binding protein family 1 595 e-168 B3KDQ5.1 B3KDQ5_9BACI Extracellular solute-binding protein family 1 594 e-168 Q5WIY0.1 Q5WIY0_BACSK Polysaccharide ABC transporter substrate-b... 551 e-154 >B1D7X0.1 B1D7X0_9BACL Extracellular solute-binding protein family 1 Length = 575 Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/567 (58%), Positives = 415/567 (73%), Gaps = 10/567 (1%) Query: 10 ASSIVALTLVS-TLAGCSGNDXXXXXXXXXXXXXXXXXXLK--------PVTLTYFSEDS 60 +S ++ TLV+ LAGC N+ + P+TLTY+SED Sbjct: 8 SSLALSTTLVAGLLAGCGSNNNDEKNSGSSANTGGNATNTESAAPEDTSPLTLTYYSEDP 67 Query: 61 STNWNNMKDEVGKIITEKTGVTLDAEFAVGDPVQKISLIAATGNYPDLIAAKADVGRLVD 120 S NW NM+DE+GK +TEKTG+TLDAEFAVGD VQK SLIAA+G YPDLI+AK + + VD Sbjct: 68 SPNWANMQDEIGKSLTEKTGITLDAEFAVGDAVQKSSLIAASGEYPDLISAKQSIAKFVD 127 Query: 121 AGAILDLTDLIEKHAPNIKKMLGDKIVRTKYSLEDQAIYSIPTWSAVDEKKFKADGGFEL 180 AGA+LDLTDLI+K+AP++KK+ + R +YS +D AIY IP+++ + ++ F A GGFEL Sbjct: 128 AGAVLDLTDLIDKYAPHLKKLFEGNMSRLRYSDDDHAIYVIPSYNGIGQQYFNAGGGFEL 187 Query: 181 QHRVVKEAGYPEIQTVKDYEKVIQDYITKHPTDENGNKNIGLSLNGDDWHMY-QVTNAGF 239 QHRVVKE GYP+I+TV DYEK I+DY+ HP DENGN NIGL+LN DDWHMY VTN F Sbjct: 188 QHRVVKELGYPQIRTVADYEKAIKDYLALHPKDENGNPNIGLTLNADDWHMYISVTNPAF 247 Query: 240 QTTGGPDDGEYYIDQETHQATYHFRRPEEKEYFRWLNHMNNIGLLDPESFVQKTDQFKAK 299 TGG DDGE+ ID +T + TYHFRRPEEK+YF+WLNHMN GLLDPESFVQK DQ+KAK Sbjct: 248 FATGGSDDGEFNIDIDTQKVTYHFRRPEEKDYFKWLNHMNAEGLLDPESFVQKYDQYKAK 307 Query: 300 VASGRVLGLADPEWDYGDAQNALKAAGKLDQTYGHYPVTMSKEYKDTSFWPAGFDGGYGI 359 VASGRVLGL D +WDYGD + ALKAAGK DQ YGHYPVTMS + K+ SFWP GF GG G+ Sbjct: 308 VASGRVLGLIDQDWDYGDGEKALKAAGKFDQGYGHYPVTMSADVKEASFWPTGFMGGSGV 367 Query: 360 SISSKCKDPVRAIQFLDFLASEEGQILNNWGIEGKHYTVEGGKRVIIPAVQERMDNDNAA 419 +IS DPVR I+FLD+LAS+EGQ+L NWGIEGK Y V GKRVI V R ND Sbjct: 368 AISKDNPDPVRTIKFLDYLASDEGQVLVNWGIEGKQYNVVDGKRVIPEDVNNRKINDAVN 427 Query: 420 FQKEAGVGLYWNMMVHYGDGIKDSTGNYFTRSYPEQLTASYSEPEKETLKAYGAEHWKDL 479 F KE G+GLY + HYGDG+KD +GNY+T S+PEQ+ A +++ EKETLKAYGA WKDL Sbjct: 428 FTKETGIGLYNLLSGHYGDGVKDPSGNYYTTSFPEQIVAGFNDVEKETLKAYGATTWKDL 487 Query: 480 FPAEEEFGPRAYGAAYTMSLASDDPAVILGAKMKDITWKRIPEAVMSKPEEFDKIWAAYM 539 FP EEEF + +GAA+ + + D AV++ K+ DITWKRIPEA+++KPE+FDKIW AY Sbjct: 488 FPKEEEFKVKPWGAAWNIPVPGDSEAVVIEKKLTDITWKRIPEAILAKPEDFDKIWDAYQ 547 Query: 540 ADLDKAGVKEMEEAYTKHILNRIELWS 566 +L KA V++ E+ + R++LWS Sbjct: 548 QELVKANVEKAEKIREDLVKARVKLWS 574 >B1DGY5.1 B1DGY5_9BACL Putative uncharacterized protein Length = 502 Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/501 (62%), Positives = 399/501 (79%), Gaps = 1/501 (0%) Query: 67 MKDEVGKIITEKTGVTLDAEFAVGDPVQKISLIAATGNYPDLIAAKADVGRLVDAGAILD 126 M+D+VGK IT++TGVTLDAEFAVGDP QK++LIA +G+YPDLI+ K D+ ++VDAGA+LD Sbjct: 1 MQDDVGKEITKQTGVTLDAEFAVGDPSQKVALIATSGDYPDLISPKGDLNKMVDAGAMLD 60 Query: 127 LTDLIEKHAPNIKKMLGDKIVRTKYSLEDQAIYSIPTWSAVDEKKFKADGGFELQHRVVK 186 LTDLIEK+APN+KK+ GD+I R +YS +D +IY IPT+SAVD + F A GGFELQHR VK Sbjct: 61 LTDLIEKYAPNLKKLFGDQINRLRYSNDDPSIYVIPTYSAVDGQTFVAGGGFELQHRAVK 120 Query: 187 EAGYPEIQTVKDYEKVIQDYITKHPTDENGNKNIGLSLNGDDWHMY-QVTNAGFQTTGGP 245 EAGYPEI+T++DYE VI+ YI KHPTDENGNKNIGL+LNGDDWH Y VTN +TTG Sbjct: 121 EAGYPEIKTLQDYENVIKSYIEKHPTDENGNKNIGLTLNGDDWHTYISVTNPAAETTGKS 180 Query: 246 DDGEYYIDQETHQATYHFRRPEEKEYFRWLNHMNNIGLLDPESFVQKTDQFKAKVASGRV 305 DGEYYID +T++ATYH+R EKEYF WLNHM NIGLLD ESFV+K DQ+ AKVASGRV Sbjct: 181 GDGEYYIDPKTNEATYHYRTEGEKEYFEWLNHMYNIGLLDKESFVEKNDQYLAKVASGRV 240 Query: 306 LGLADPEWDYGDAQNALKAAGKLDQTYGHYPVTMSKEYKDTSFWPAGFDGGYGISISSKC 365 +GL D +W Y D + +LKA KLDQTYGHY V +S YKD F GF G+GI I++ C Sbjct: 241 IGLIDADWGYADGEKSLKADNKLDQTYGHYSVMLSDAYKDNRFQSTGFMAGWGIGITTSC 300 Query: 366 KDPVRAIQFLDFLASEEGQILNNWGIEGKHYTVEGGKRVIIPAVQERMDNDNAAFQKEAG 425 KDPVRAI+FLD+LASE+ Q+LNNWGIEGK YT++ GKRV+ VQ R+ NDN AF +E+G Sbjct: 301 KDPVRAIKFLDYLASEQAQVLNNWGIEGKQYTLQDGKRVVPEDVQNRIINDNTAFSQESG 360 Query: 426 VGLYWNMMVHYGDGIKDSTGNYFTRSYPEQLTASYSEPEKETLKAYGAEHWKDLFPAEEE 485 VG Y N+ HYGDG+KDS GNY+T+++PEQ+ ++Y+ +KETLKAY A WKDLFP E++ Sbjct: 361 VGFYSNIGAHYGDGVKDSAGNYYTKNFPEQIVSTYTSADKETLKAYNAATWKDLFPQEDQ 420 Query: 486 FGPRAYGAAYTMSLASDDPAVILGAKMKDITWKRIPEAVMSKPEEFDKIWAAYMADLDKA 545 F +A+GAA+ +++ DD IL KMKDITWK+IP VM+KPE+F K+W Y +L A Sbjct: 421 FPVKAWGAAWNITVPGDDEVTILTNKMKDITWKQIPRIVMAKPEDFAKMWDGYQKELLDA 480 Query: 546 GVKEMEEAYTKHILNRIELWS 566 GV++ME+ +TK++ +R++LWS Sbjct: 481 GVEKMEKGFTKYVQDRVKLWS 501 >B3KJH7.1 B3KJH7_9BACI Extracellular solute-binding protein family 1 Length = 559 Score = 595 bits (1534), Expect = e-168, Method: Compositional matrix adjust. Identities = 292/564 (51%), Positives = 399/564 (70%), Gaps = 13/564 (2%) Query: 6 KGLIASSIVALTLVST--LAGCSGNDXXXXXXXXXXXXXXXXXXLKPVTLTYFSEDSSTN 63 KGL S ++A+ L+ T L CS D LKPVT+TYFS DS+ N Sbjct: 5 KGL--SPLLAMMLLVTFILGACSSGDSGNSAGSEGED-------LKPVTITYFSADSNAN 55 Query: 64 WNNMKDEVGKIITEKTGVTLDAEFAVGDPVQKISLIAATGNYPDLIAAKADVGRLVDAGA 123 W +M+D VGK +TE TGVT+ AEFAV QK+ L+ A+G YPDL+ AK D VD+GA Sbjct: 56 WASMQDAVGKKLTETTGVTIQAEFAVDGSNQKLPLMVASGEYPDLVFAKGDANLFVDSGA 115 Query: 124 ILDLTDLIEKHAPNIKKMLGDKIVRTKYSLEDQAIYSIPTWSAVDEKKFKADGGFELQHR 183 +DLTDLIE+HAPN+KK+ GD + R K+S ED++IY +PT +AVD ++ A G F +QH Sbjct: 116 FIDLTDLIEEHAPNLKKLYGDYMNRLKWSNEDESIYVLPTLNAVDHQQLDAGGNFHIQHE 175 Query: 184 VVKEAGYPEIQTVKDYEKVIQDYITKHPTDENGNKNIGLSLNGDDWH-MYQVTNAGFQTT 242 V+KE GYPEI+TVKD+EK ++DY KHPT + G I L+LN D W M VT+A T Sbjct: 176 VLKELGYPEIKTVKDFEKALKDYYEKHPTID-GQPTIPLTLNADGWRFMISVTDAAVIAT 234 Query: 243 GGPDDGEYYIDQETHQATYHFRRPEEKEYFRWLNHMNNIGLLDPESFVQKTDQFKAKVAS 302 G DGEYY+D ET++A H+RRPE+KEYFRWLNH+N G+LD E+FVQKTDQ++AK+AS Sbjct: 235 GLSGDGEYYVDPETYEAKLHYRRPEDKEYFRWLNHLNATGILDNETFVQKTDQYEAKIAS 294 Query: 303 GRVLGLADPEWDYGDAQNALKAAGKLDQTYGHYPVTMSKEYKDTSFWPAGFDGGYGISIS 362 GRVLG+ D +W +G+ NAL+ AGK ++TY +P+ + + KD SF AG+ G+G+ I+ Sbjct: 295 GRVLGVIDADWGFGNPTNALRTAGKENRTYARFPIQLDETTKDASFQNAGYAAGWGVGIT 354 Query: 363 SKCKDPVRAIQFLDFLASEEGQILNNWGIEGKHYTVEGGKRVIIPAVQERMDNDNAAFQK 422 + KDPVR I+FLD+LASEEGQIL NWGIEG+HY V+ GKRVI VQ+R NDNA+F K Sbjct: 355 TSAKDPVRIIKFLDYLASEEGQILMNWGIEGEHYNVKDGKRVIPEDVQDRKVNDNASFTK 414 Query: 423 EAGVGLYWNMMVHYGDGIKDSTGNYFTRSYPEQLTASYSEPEKETLKAYGAEHWKDLFPA 482 E+G+GLY ++ YGDG+KDSTGNY+T ++PEQ+ A+Y+ KETL+AYGAE WKD +P Sbjct: 415 ESGIGLYNSLFPRYGDGVKDSTGNYYTTNFPEQIKANYAPSAKETLQAYGAEMWKDFWPK 474 Query: 483 EEEFGPRAYGAAYTMSLASDDPAVILGAKMKDITWKRIPEAVMSKPEEFDKIWAAYMADL 542 EEF + +GAAY +S D I ++++I KRIPE +++ P +FD ++ ++ DL Sbjct: 475 SEEFPTKPWGAAYLISPPIDSNIAITYKRVEEIVRKRIPEIILADPSQFDALYDQFIQDL 534 Query: 543 DKAGVKEMEEAYTKHILNRIELWS 566 + AG ++ME+ Y++ + +R+ELW+ Sbjct: 535 NAAGAEKMEQEYSELVRDRVELWN 558 >B3KDQ5.1 B3KDQ5_9BACI Extracellular solute-binding protein family 1 Length = 570 Score = 594 bits (1532), Expect = e-168, Method: Compositional matrix adjust. Identities = 291/563 (51%), Positives = 393/563 (69%), Gaps = 8/563 (1%) Query: 11 SSIVALTLVST--LAGC----SGNDXXXXXXXXXXXXXXXXXXLKPVTLTYFSEDSSTNW 64 S ++A+ +++T LA C S N L+P+T+TY+S DS+ NW Sbjct: 8 SLLLAIMMMATFVLAACGNGDSNNSANGSDEGSGGSDTQQEEKLEPITMTYYSADSNANW 67 Query: 65 NNMKDEVGKIITEKTGVTLDAEFAVGDPVQKISLIAATGNYPDLIAAKADVGRLVDAGAI 124 NM+D VGK +TEKTG+T+ AE+AV QK+ L+ A+G YPDL+ AK D VD+GA Sbjct: 68 ANMQDAVGKKLTEKTGITIQAEYAVDGSNQKLPLMVASGEYPDLVFAKGDANLFVDSGAF 127 Query: 125 LDLTDLIEKHAPNIKKMLGDKIVRTKYSLEDQAIYSIPTWSAVDEKKFKADGGFELQHRV 184 +DLTDLIE+HAPNIKK+ G+ + R K+S ED+AIY +PT +AVD + A G F++QH V Sbjct: 128 IDLTDLIEEHAPNIKKVYGEYMSRLKWSNEDEAIYVLPTLAAVDHQALDAGGTFQIQHEV 187 Query: 185 VKEAGYPEIQTVKDYEKVIQDYITKHPTDENGNKNIGLSLNGDDWH-MYQVTNAGFQTTG 243 +KE GYPE++TVKDYEK ++DY KHPT + G I L+LN D W M VTN F TG Sbjct: 188 LKELGYPELKTVKDYEKALKDYAEKHPTID-GQPTIPLTLNADGWRIMISVTNPAFIATG 246 Query: 244 GPDDGEYYIDQETHQATYHFRRPEEKEYFRWLNHMNNIGLLDPESFVQKTDQFKAKVASG 303 DDGEYYID ET +A H++RPEEKEYFRWLNHMN GLLD E+FVQKTDQ++AK++SG Sbjct: 247 VSDDGEYYIDPETTEAKLHYKRPEEKEYFRWLNHMNAEGLLDKETFVQKTDQYEAKISSG 306 Query: 304 RVLGLADPEWDYGDAQNALKAAGKLDQTYGHYPVTMSKEYKDTSFWPAGFDGGYGISISS 363 RVLG+ D EW +G+A NAL+ AGK ++TY +P+ + + KD +F G+ G+G+ I++ Sbjct: 307 RVLGVIDQEWGFGNATNALRTAGKENRTYARFPIQLDESTKDATFQDTGYVAGWGVGITT 366 Query: 364 KCKDPVRAIQFLDFLASEEGQILNNWGIEGKHYTVEGGKRVIIPAVQERMDNDNAAFQKE 423 KDPVR I+FLD+LASEEGQ+L NWGIEG+HY V GKRVI VQER DNA F KE Sbjct: 367 SAKDPVRIIKFLDYLASEEGQVLMNWGIEGEHYNVVDGKRVIPEDVQERKTYDNANFTKE 426 Query: 424 AGVGLYWNMMVHYGDGIKDSTGNYFTRSYPEQLTASYSEPEKETLKAYGAEHWKDLFPAE 483 G+GLY M YGDG+KDST NY+T ++PE + +Y+ KETLKAYGAE WKDL+P + Sbjct: 427 TGIGLYNAMFPRYGDGVKDSTDNYYTTNFPETIIENYTPAAKETLKAYGAEMWKDLWPKQ 486 Query: 484 EEFGPRAYGAAYTMSLASDDPAVILGAKMKDITWKRIPEAVMSKPEEFDKIWAAYMADLD 543 EEF + +G AY + + SD I K+++IT KRIPE +++ P +FD ++ ++ +L+ Sbjct: 487 EEFDVKPWGVAYNIPVPSDSNINITYKKVEEITRKRIPEVILADPAKFDALYDQFIKELN 546 Query: 544 KAGVKEMEEAYTKHILNRIELWS 566 AG ++ME+ YT+ + R+ELW+ Sbjct: 547 DAGAEKMEQEYTQLVRERVELWN 569 >Q5WIY0.1 Q5WIY0_BACSK Polysaccharide ABC transporter substrate-binding protein Length = 553 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 281/567 (49%), Positives = 382/567 (67%), Gaps = 20/567 (3%) Query: 4 EKKGLIASSIVALTLVSTL--AGCSGNDXXXXXXXXXXXXXXXXXXLKPVTLTYFSEDSS 61 EK+ ++ +S +A ++ L AGC+ +D PVT T FS D Sbjct: 2 EKRSVVRASTIAGAVMVALGMAGCTSDDASNESDD------------SPVTFTLFSADPH 49 Query: 62 TNWNNMKDEVGKIITEKTGVTLDAEFAVGDPVQKISLIAATGNYPDLIAAKADVGRLVDA 121 + W+NM+ V + + E+TGVTL EF V QKI+L+AA+G+YPD I K LV+A Sbjct: 50 SQWDNMESPVSQKVMEETGVTLQPEFDVNGGEQKIALMAASGDYPDFILPKGSASTLVNA 109 Query: 122 GAILDLTDLIEKHAPNIKKMLGDKIVRTKYSLEDQAIYSIPTWSAVDEKKFKADGGFELQ 181 GA +DLTDLIE+H PN+KK GD R K+S ED++IY +PT S +D ++ GF LQ Sbjct: 110 GAFIDLTDLIEEHGPNLKKAYGDYFNRLKWSEEDESIYILPT-SPIDHTYWEPGNGFMLQ 168 Query: 182 HRVVKEAGYPEIQTVKDYEKVIQDYITKHPTDENGNKNIGLSLNGDDWH-MYQVTNAGFQ 240 H VVKE GYP+I+TVKD+E I+ Y+ ++PT +G +GLSL DDW M TN F Sbjct: 169 HEVVKELGYPDIRTVKDFEDAIRAYMEENPTI-DGQPTLGLSLLADDWRIMISTTNPAFY 227 Query: 241 TTGGPDDGEYYIDQETHQATYHFRRPEEKEYFRWLNHMNNIGLLDPESFVQKTDQFKAKV 300 TG PDDGE+YID +T++AT H+RR EEKEYFRWLNHMN+ GLLDPESFVQK DQ+ K+ Sbjct: 228 ATGAPDDGEFYIDPDTYEATMHYRRAEEKEYFRWLNHMNDSGLLDPESFVQKYDQYLEKI 287 Query: 301 ASGRVLGLADPEWDYGDAQNALKAAGKLDQTYGHYPVTMSKEYKDTSFWPAGFDGGYGIS 360 +SGRVLGL D +W DA+ AL+ AGK ++ YG YPVT+++EYK +F G+ GG+GI Sbjct: 288 SSGRVLGLIDADWQVDDAERALREAGKHERMYGMYPVTLTEEYKHPNFQDTGYLGGWGIG 347 Query: 361 ISSKCKDPVRAIQFLDFLASEEGQILNNWGIEGKHYTVEGGKRVIIP-AVQERMDNDNAA 419 IS +DPV+AIQFLD+L SEEGQIL NWG+EG+HY + GKRVI P ++ER N+NA Sbjct: 348 ISIDNEDPVKAIQFLDYLVSEEGQILQNWGLEGEHYEIVDGKRVIPPEEMEER--NNNAN 405 Query: 420 FQKEAGVGLYWNMMVHYGDGIKDSTGNYFTRSYPEQLTASYSEPEKETLKAYGAEHWKDL 479 + KE G+G+ YGDG++DSTG FT + EQ+ SY+E EKE L YG E WKDL Sbjct: 406 YVKETGIGVLKGFAPAYGDGVEDSTGQTFTIANTEQIIDSYTEVEKEVLSNYGIEMWKDL 465 Query: 480 FPAEEEFGPRAYGAAYTMSLASDDPAVILGAKMKDITWKRIPEAVMSKPEEFDKIWAAYM 539 +P E+EF + +GAAY + + S ++ + DI +++PEA+++ PEEFD+IW +M Sbjct: 466 YPQEDEFPVKPWGAAYNIPVDSTSDLNVIMQRCLDIVKRKVPEAILAAPEEFDQIWDEFM 525 Query: 540 ADLDKAGVKEMEEAYTKHILNRIELWS 566 A+L+ AGV+E E+ YT+ + R+ELW+ Sbjct: 526 AELEGAGVEEAEKEYTELVRTRVELWN 552 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,632,836,199 Number of extensions: 162455985 Number of successful extensions: 283244 Number of sequences better than 1.0e-05: 142 Number of HSP's gapped: 283086 Number of HSP's successfully gapped: 142 Length of query: 568 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 427 Effective length of database: 1,732,333,088 Effective search space: 739706228576 Effective search space used: 739706228576 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)