BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0596.0014.p (223 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5EIH3.1 C5EIH3_9FIRM Putative uncharacterized protein 246 1e-63 A8RR84.1 A8RR84_9CLOT Putative uncharacterized protein 231 3e-59 C2KZ81.1 C2KZ81_9FIRM Integral membrane protein 176 1e-42 A8S663.1 A8S663_9FIRM Putative uncharacterized protein 139 2e-31 C0ECL6.1 C0ECL6_9CLOT Putative uncharacterized protein 110 6e-23 >C5EIH3.1 C5EIH3_9FIRM Putative uncharacterized protein Length = 214 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 118/209 (56%), Positives = 151/209 (72%) Query: 4 MKEYINKVDTKRLIIMIVGNVFLGMGISIFKLSGMGNDPFSGMVMALAECIGMTYAXXXX 63 + Y K+ +R +M +GNVFLGMGISIFKLSG+GNDPFSGMVMAL++ G+TYA Sbjct: 2 LTGYFKKIGMRRFAVMTIGNVFLGMGISIFKLSGLGNDPFSGMVMALSDRTGITYALFLV 61 Query: 64 XXXXXXXXXEFITGRRFIGAGTFVNAILLGYIATFFYNTWLNLLGEPQLLWQRVIIVAIG 123 E GR+ IGAGT +NA LLGYIATFFY+ WL +G P+ + QRVI V G Sbjct: 62 MVNAVLFLYEIAAGRKLIGAGTLINAFLLGYIATFFYDIWLTFIGTPEQMIQRVITVLTG 121 Query: 124 VVVCSFGVSMYQTSDVGVAPYDSLSLIMRDNFPRISYFWHRMFTDALCALICFLAGGIIG 183 V++ SFGVS+YQ +VGVAPYDS+SLI P + YFW+R+ TD CALIC+L+GGIIG Sbjct: 122 VIITSFGVSLYQYPNVGVAPYDSISLIWCGKKPHVPYFWYRISTDTFCALICWLSGGIIG 181 Query: 184 LGTLVSVFGLGPIIHFFDVNFTKKLLAKG 212 LGTL++ FGLGPI+ FF+V+ + ++L G Sbjct: 182 LGTLLAAFGLGPIVQFFNVHVSSRILDTG 210 >A8RR84.1 A8RR84_9CLOT Putative uncharacterized protein Length = 210 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 123/204 (60%), Positives = 145/204 (71%) Query: 6 EYINKVDTKRLIIMIVGNVFLGMGISIFKLSGMGNDPFSGMVMALAECIGMTYAXXXXXX 65 Y K+ +RL+IMI+GNVFLGMGISIFKLSG+GNDPFSGMVMALA +G +YA Sbjct: 4 NYFKKIGARRLLIMIMGNVFLGMGISIFKLSGLGNDPFSGMVMALANILGFSYASFLLVI 63 Query: 66 XXXXXXXEFITGRRFIGAGTFVNAILLGYIATFFYNTWLNLLGEPQLLWQRVIIVAIGVV 125 E GRR IG GT VNA LLGYI TFF W L P + RV+ V +GV+ Sbjct: 64 NGGLFIFELAAGRRLIGIGTLVNAFLLGYIVTFFNGLWPLLFPVPDTMLLRVVTVLVGVI 123 Query: 126 VCSFGVSMYQTSDVGVAPYDSLSLIMRDNFPRISYFWHRMFTDALCALICFLAGGIIGLG 185 V SFGVS+YQT + GV PYDS+SLI + P I YFWHR+ TDA+CA+ICFLAGGIIGLG Sbjct: 124 VTSFGVSLYQTPNAGVTPYDSISLITAKSRPLIPYFWHRIATDAVCAVICFLAGGIIGLG 183 Query: 186 TLVSVFGLGPIIHFFDVNFTKKLL 209 TLVS FGLGPI+HFF+V +L+ Sbjct: 184 TLVSAFGLGPIVHFFNVQVAGRLV 207 >C2KZ81.1 C2KZ81_9FIRM Integral membrane protein Length = 249 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/206 (46%), Positives = 129/206 (62%), Gaps = 3/206 (1%) Query: 14 KRLIIMIVGNVFLGMGISIFKLSGMGNDPFSGMVMALAECIGMTYAXXXXXXXXXXXXXE 73 +R I M++G + + +GI++FK S +GNDP S + M LAE G++ + Sbjct: 32 RRYIGMLLGVLVISIGIALFKESHLGNDPISALNMRLAEIFGISLGQQNMIANVLFFMVQ 91 Query: 74 FITGRRFIGAGTFVNAILLGYIATFFYNTWLNLLG--EPQLLWQRVIIVAIGVVVCSFGV 131 GR++IGAGTF N IL+GYI TFFY + G E ++I V++ VVV SFGV Sbjct: 92 LAFGRKYIGAGTFANGILVGYIVTFFYEIFTKHFGYAEEHGFVVQLIWVSLAVVVTSFGV 151 Query: 132 SMYQTSDVGVAPYDSLSLIMRDNFPRISYFWHRMFTDALCALICFLAGGIIGLGTLVSVF 191 S+YQT+D+GVAPYD LSL +RD + Y+ RM TD L AL FL GG++G+GTLVS Sbjct: 152 SLYQTADLGVAPYDYLSLGLRDKTKK-HYYGCRMLTDGLAALGTFLTGGLVGIGTLVSAL 210 Query: 192 GLGPIIHFFDVNFTKKLLAKGPKANN 217 LGPIIHFFDV+F++K + P Sbjct: 211 FLGPIIHFFDVHFSEKWIGYTPSGEK 236 >A8S663.1 A8S663_9FIRM Putative uncharacterized protein Length = 212 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/207 (43%), Positives = 127/207 (61%), Gaps = 1/207 (0%) Query: 8 INKVDTKRLIIMIVGNVFLGMGISIFKLSGMGNDPFSGMVMALAECIGMTYAXXXXXXXX 67 + K +R++ M+ G V + +GI++FK S +GND S + M LAE +G++ Sbjct: 6 LRKPTVRRVVGMVAGIVIIALGIALFKQSHLGNDSISALNMRLAELLGISLGTQNLCTNI 65 Query: 68 XXXXXEFITGRRFIGAGTFVNAILLGYIATFFYNTWLNLLGEPQLLWQRVIIVAIGVVVC 127 EF GR++IG GTFVN I +GYI T FY+ G+ L ++ V V+V Sbjct: 66 LFFLLEFWFGRKYIGLGTFVNGICIGYIVTAFYDPIHAHFGDAPSLAVQLAWVIAAVLVT 125 Query: 128 SFGVSMYQTSDVGVAPYDSLSLIMRDNFPRISYFWHRMFTDALCALICFLAGGIIGLGTL 187 + G S+YQT+D+G+APYD LSL +RD P YF R+FTDAL AL+C+L GG++GLGTL Sbjct: 126 ALGASLYQTADLGIAPYDYLSLGLRDYTP-CPYFGCRIFTDALSALLCWLLGGLVGLGTL 184 Query: 188 VSVFGLGPIIHFFDVNFTKKLLAKGPK 214 + F LGP I FFD F++K+L P Sbjct: 185 ICAFCLGPFIQFFDRTFSQKVLQYKPN 211 >C0ECL6.1 C0ECL6_9CLOT Putative uncharacterized protein Length = 223 Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 13/211 (6%) Query: 10 KVDTKRLIIMIVGNVFLGMGISIFKLSGMGNDPFSGMVMALAECIGMTYAXXXXXXXXXX 69 + ++R +M+ G + +G+ +S F+LS G DPF+ M + ++ + + + Sbjct: 5 HIPSRRFAMMLFGILLVGLSVSFFRLSAFGVDPFTCMNLGVSGFLHLGFGTWQLIVNIAL 64 Query: 70 XXXEFITGRRFIGAGTFVNAILLGYIATFFYNTWL--NLLGEPQLLWQRVIIVAIGVVVC 127 F T R IG GT VN + +GYIA F WL ++ G L RV+++A G VV Sbjct: 65 LILVFFTMRSSIGLGTIVNMVCVGYIADFV--CWLISDMGGVDFSLPFRVLLLAAGTVVL 122 Query: 128 SFGVSMYQTSDVGVAPYDSLSLIMRD-NFPRISYFWHRMFTDALCALI----CFLAGG-- 180 GV++Y T+++G+APYD++++I++ ++++ W R+ TD C I C L+G Sbjct: 123 CAGVAIYMTANMGIAPYDAVAIILQQATHHKLAFRWARILTDVSCVTIGIIFCLLSGENL 182 Query: 181 --IIGLGTLVSVFGLGPIIHFFDVNFTKKLL 209 +IGLGT+V+ F GP++ FF ++ + +L Sbjct: 183 WLLIGLGTIVAAFLTGPLVQFFTLHLAEPML 213 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.330 0.145 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,238,849,077 Number of extensions: 47776878 Number of successful extensions: 181624 Number of sequences better than 1.0e-05: 234 Number of HSP's gapped: 181189 Number of HSP's successfully gapped: 234 Length of query: 223 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 92 Effective length of database: 1,826,543,238 Effective search space: 168041977896 Effective search space used: 168041977896 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 128 (53.9 bits)