BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0591.0027.p (413 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z8U0.1 C0Z8U0_BREBN Conserved hypothetical membrane protein 253 2e-65 C3BJP1.1 C3BJP1_9BACI Major facilitator superfamily MFS_1 251 8e-65 C3B2T6.1 C3B2T6_BACMY Major facilitator superfamily MFS_1 251 1e-64 C3AKW7.1 C3AKW7_BACMY Major facilitator superfamily MFS_1 251 1e-64 C3FJB0.1 C3FJB0_BACTB Major facilitator superfamily MFS_1 239 3e-61 >C0Z8U0.1 C0Z8U0_BREBN Conserved hypothetical membrane protein Length = 401 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 151/390 (38%), Positives = 227/390 (58%), Gaps = 14/390 (3%) Query: 24 HSNYRMISILLFFPALFILSALYITVPLIPVFAGEFHISLEQXXXXXXXXXXXXXXXXXX 83 NY +++ +L + + ++S+LY+T+PL+ +FA F I+L Q Sbjct: 3 QRNYSLMTAILCWSGIVVMSSLYVTIPLMTLFADLFSITLTQAAAVGSAFSVGFAIGCLI 62 Query: 84 XXPLSDKLGRKRVMXXXXXXXXXXXXXXXXXXXFPALIVFRCIQGAVAATFSPVALTYAG 143 PLS+K GRK V+ F +IV R +QGA AATFSPVAL YA Sbjct: 63 YGPLSEKYGRKNVIVIGMIALALFSLLLGSANDFVWIIVLRGLQGAAAATFSPVALAYAV 122 Query: 144 EVFPTHRRVSAIGMISAGFLMAGILGQVWASYLNERLGWHAVFLLLAAVYGLTFXXXXXX 203 E+FP +RV+AIG IS GFL AGI+GQV ++ ++++ WHAVF +LAA+Y +T Sbjct: 123 EMFPAAKRVTAIGFISTGFLAAGIIGQVLSTVMSQQYSWHAVFYMLAAIYFVTLFVVMRW 182 Query: 204 XXXXXXXXXXXXTPGSRRTEWR------SILANRYLWLCYSVAVMLLLCFVGMYTVLGSF 257 +P + W S+ + + L Y +A++LL+ FV MYTVL S+ Sbjct: 183 LPKEE-------SPLATVNIWEPIKRIPSLFKQKNIVLSYIIALVLLMSFVNMYTVLSSY 235 Query: 258 LHNSPYELSNMQVLGIRAFGMIGMLCCFISGPCCARWGSKAVLRSGLLLAIAAMCALSLV 317 L S + LSN ++L +R G++GML ++G R+G + VLR GL LA+ +M +L ++ Sbjct: 236 LAGSDFGLSNKEMLLVRTIGVVGMLISPLAGGLAKRFGLRTVLRFGLGLAVVSMASLGMI 295 Query: 318 RSIAAYTALSAVFVAGIAILVPSLISLVGDIGSKQRATATSLYTFILFAGASLGPIVSVY 377 ++A S +FVAGIA+ VPS+ISLVG +G K R A S+YTFILF+G SLGPI+S+ Sbjct: 296 SNLALLIGTSVLFVAGIALSVPSVISLVGQLGGKSRGIAVSVYTFILFSGTSLGPILSIR 355 Query: 378 ALDIGPPNVLPFLIFAGLLTVGLINSLFIK 407 +++G L F++ A +L +GL+ + I+ Sbjct: 356 LMNVGSYE-LTFVLLAIVLGIGLLAACLIR 384 >C3BJP1.1 C3BJP1_9BACI Major facilitator superfamily MFS_1 Length = 399 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 146/383 (38%), Positives = 220/383 (57%), Gaps = 2/383 (0%) Query: 25 SNYRMISILLFFPALFILSALYITVPLIPVFAGEFHISLEQXXXXXXXXXXXXXXXXXXX 84 NY +++ +L + + ++S+LY+T+PLIP+FA FH+SL Q Sbjct: 11 KNYALMTAVLCWSGMAVMSSLYVTIPLIPLFADFFHVSLTQSAITGSMFSLGFAIGCLLF 70 Query: 85 XPLSDKLGRKRVMXXXXXXXXXXXXXXXXXXXFPALIVFRCIQGAVAATFSPVALTYAGE 144 +SDK GRK V+ L+V R +QG AATFSPVAL Y E Sbjct: 71 GAISDKYGRKNVILIGLIGLAIISLLLGLVNSLSWLVVLRGLQGITAATFSPVALVYVVE 130 Query: 145 VFPTHRRVSAIGMISAGFLMAGILGQVWASYLNERLGWHAVFLLLAAVYGLTFXXXXXXX 204 FP ++V+ IG +S GFL+AGI+GQV ++ +++ GWH VF LL++VY +T Sbjct: 131 SFPVEKKVTTIGFVSTGFLVAGIVGQVMSAVISQYFGWHMVFFLLSSVYIVTALWIYYAL 190 Query: 205 XXXXXXXXXXXTPGSRRTEWRSILANRYLWLCYSVAVMLLLCFVGMYTVLGSFLHNSPYE 264 G + + + + L L Y +A +LL+ FV MYTVLG++L +S ++ Sbjct: 191 PRGESSQSYADILGPVK-QMGKVFTQKNLVLSYMIAFVLLMAFVNMYTVLGNYLSSSNFQ 249 Query: 265 LSNMQVLGIRAFGMIGMLCCFISGPCCARWGSKAVLRSGLLLAIAAMCALSLVRSIAAYT 324 L Q+L +R G+ GML ++G R+G K VL+ GLL+AI ++ +L + S+ Sbjct: 250 LYAEQILYVRLAGLFGMLISPLAGRLTMRFGVKQVLQGGLLIAILSLSSLGFISSLPFLI 309 Query: 325 ALSAVFVAGIAILVPSLISLVGDIGSKQRATATSLYTFILFAGASLGPIVSVYALDIGPP 384 +S FV GIA+ VP+L++LVG++G K R A S+YTFILF G S+GP++S+Y +DIG Sbjct: 310 IMSVCFVVGIALSVPALVTLVGELGGKSRGIAVSIYTFILFLGTSIGPVISIYLMDIGGY 369 Query: 385 NVLPFLIFAGLLTVGLINSLFIK 407 + F++ +L VGLI+SLFI Sbjct: 370 SQ-TFVLLGLILFVGLISSLFIN 391 >C3B2T6.1 C3B2T6_BACMY Major facilitator superfamily MFS_1 Length = 399 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/383 (37%), Positives = 220/383 (57%), Gaps = 2/383 (0%) Query: 25 SNYRMISILLFFPALFILSALYITVPLIPVFAGEFHISLEQXXXXXXXXXXXXXXXXXXX 84 NY +++ +L + + ++S+LY+T+PLIP+FA FH+SL Q Sbjct: 11 KNYALMTAVLCWSGMAVMSSLYVTIPLIPIFADFFHVSLTQSAITGSMFSLGFAIGCLLF 70 Query: 85 XPLSDKLGRKRVMXXXXXXXXXXXXXXXXXXXFPALIVFRCIQGAVAATFSPVALTYAGE 144 +SDK GRK V+ L+V R +QG AATFSPVAL Y E Sbjct: 71 GAISDKYGRKNVILMGLIGLAIISFLLGLVNSLSWLVVLRGLQGIAAATFSPVALAYVVE 130 Query: 145 VFPTHRRVSAIGMISAGFLMAGILGQVWASYLNERLGWHAVFLLLAAVYGLTFXXXXXXX 204 FP ++V+ IG +S GFL+AGI+GQV ++ +++ GWH VF LL++VY +T Sbjct: 131 SFPVEKKVTTIGFVSTGFLVAGIVGQVMSTVISQYFGWHMVFFLLSSVYMVTALWIYYSL 190 Query: 205 XXXXXXXXXXXTPGSRRTEWRSILANRYLWLCYSVAVMLLLCFVGMYTVLGSFLHNSPYE 264 G + + + + L L Y +A +LL+ FV MYTVLG++L +S ++ Sbjct: 191 PRGESSQSYTDILGPVK-QMGKVFTQKNLVLSYMIAFVLLMAFVNMYTVLGNYLSSSNFQ 249 Query: 265 LSNMQVLGIRAFGMIGMLCCFISGPCCARWGSKAVLRSGLLLAIAAMCALSLVRSIAAYT 324 L Q+L +R G+ GML ++G R+G K VL+ GLL+AI ++ +L ++ S+ Sbjct: 250 LHADQILYVRLAGLFGMLLSPLAGRLTMRFGVKQVLQGGLLIAILSLSSLGVISSLPFLI 309 Query: 325 ALSAVFVAGIAILVPSLISLVGDIGSKQRATATSLYTFILFAGASLGPIVSVYALDIGPP 384 +S FV GIA+ VP+L++LVG++G K R A S+YTFILF G S+GP++S+Y ++IG Sbjct: 310 IMSVCFVVGIALSVPALVTLVGELGGKSRGIAVSIYTFILFLGTSIGPVISIYLMNIGGY 369 Query: 385 NVLPFLIFAGLLTVGLINSLFIK 407 + F++ +L VGL +SLFI Sbjct: 370 S-QTFVLLGSILCVGLFSSLFIN 391 >C3AKW7.1 C3AKW7_BACMY Major facilitator superfamily MFS_1 Length = 399 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/383 (37%), Positives = 220/383 (57%), Gaps = 2/383 (0%) Query: 25 SNYRMISILLFFPALFILSALYITVPLIPVFAGEFHISLEQXXXXXXXXXXXXXXXXXXX 84 NY +++ +L + + ++S+LY+T+PLIP+FA FH+SL Q Sbjct: 11 KNYALMTAVLCWSGMAVMSSLYVTIPLIPIFADFFHVSLTQSAITGSMFSLGFAIGCLLF 70 Query: 85 XPLSDKLGRKRVMXXXXXXXXXXXXXXXXXXXFPALIVFRCIQGAVAATFSPVALTYAGE 144 +SDK GRK V+ L+V R +QG AATFSPVAL Y E Sbjct: 71 GAISDKYGRKNVILMGLIGLAIISFLLGLVNSLSWLVVLRGLQGIAAATFSPVALAYVLE 130 Query: 145 VFPTHRRVSAIGMISAGFLMAGILGQVWASYLNERLGWHAVFLLLAAVYGLTFXXXXXXX 204 FP ++V+ IG +S GFL+AGI+GQV ++ +++ GWH VF LL++VY +T Sbjct: 131 SFPVEKKVTTIGFVSTGFLVAGIVGQVMSTVISQYFGWHMVFFLLSSVYMVTALWIYYSL 190 Query: 205 XXXXXXXXXXXTPGSRRTEWRSILANRYLWLCYSVAVMLLLCFVGMYTVLGSFLHNSPYE 264 G + + + + L L Y +A +LL+ FV MYTVLG++L +S ++ Sbjct: 191 PRGESSQSYTDILGPVK-QMGKVFTQKNLVLSYMIAFVLLMAFVNMYTVLGNYLSSSNFQ 249 Query: 265 LSNMQVLGIRAFGMIGMLCCFISGPCCARWGSKAVLRSGLLLAIAAMCALSLVRSIAAYT 324 L Q+L +R G+ GML ++G R+G K VL+ GLL+AI ++ +L ++ S+ Sbjct: 250 LHADQILYVRLAGLFGMLLSPLAGRLTMRFGVKQVLQGGLLIAILSLSSLGVISSLPFLI 309 Query: 325 ALSAVFVAGIAILVPSLISLVGDIGSKQRATATSLYTFILFAGASLGPIVSVYALDIGPP 384 +S FV GIA+ VP+L++LVG++G K R A S+YTFILF G S+GP++S+Y ++IG Sbjct: 310 IMSVCFVVGIALSVPALVTLVGELGGKSRGIAVSIYTFILFLGTSIGPVISIYLMNIGGY 369 Query: 385 NVLPFLIFAGLLTVGLINSLFIK 407 + F++ +L VGL +SLFI Sbjct: 370 SQ-TFVLLGSILCVGLFSSLFIN 391 >C3FJB0.1 C3FJB0_BACTB Major facilitator superfamily MFS_1 Length = 394 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 145/383 (37%), Positives = 212/383 (55%), Gaps = 2/383 (0%) Query: 24 HSNYRMISILLFFPALFILSALYITVPLIPVFAGEFHISLEQXXXXXXXXXXXXXXXXXX 83 NY +++ +L + + ++S+LY+T+PLI +F+ F+ SL Q Sbjct: 11 EKNYTIMTAVLCWSGMVVMSSLYVTIPLISLFSNIFNTSLAQSAATGSIFSVGFAIGCLL 70 Query: 84 XXPLSDKLGRKRVMXXXXXXXXXXXXXXXXXXXFPALIVFRCIQGAVAATFSPVALTYAG 143 +SDK GRK+V+ L++FR IQG AATFSPVAL Y Sbjct: 71 FGAISDKYGRKKVIFIGLLALSIVSFCLGFVDSLFWLVIFRGIQGIAAATFSPVALAYVV 130 Query: 144 EVFPTHRRVSAIGMISAGFLMAGILGQVWASYLNERLGWHAVFLLLAAVYGLTFXXXXXX 203 E+FP RRV+ IG +S GFL+AGI+GQV ++ +++ GWH VF LL+ VY T Sbjct: 131 EMFPVERRVTTIGFVSTGFLVAGIVGQVISTTVSQHFGWHMVFFLLSIVYISTAIWVYYS 190 Query: 204 XXXXXXXXXXXXTPGSRRTEWRSILANRYLWLCYSVAVMLLLCFVGMYTVLGSFLHNSPY 263 G + + + N+ L L Y +A +LL+ FV MYTVLG++L + Y Sbjct: 191 LPKGETSQSYTDILGPIK-QMGKVFTNKSLVLSYIIAFVLLMAFVNMYTVLGNYLSSPTY 249 Query: 264 ELSNMQVLGIRAFGMIGMLCCFISGPCCARWGSKAVLRSGLLLAIAAMCALSLVRSIAAY 323 L+ Q+L R G+ GML ++G R+ + VL+ GLL+AI ++ ++ V ++ Sbjct: 250 NLTAEQILYFRLAGLFGMLLSPLAGRLTKRFEVRKVLQGGLLIAIFSLSSMGFVSYLSLL 309 Query: 324 TALSAVFVAGIAILVPSLISLVGDIGSKQRATATSLYTFILFAGASLGPIVSVYALDIGP 383 +S FV GIAI VPSL+SLVG +G K R A S+YTFILF G S+GPI+S+Y + IG Sbjct: 310 VMMSVCFVIGIAISVPSLVSLVGQLGGKARGIAVSIYTFILFLGTSIGPIISIYLMKIG- 368 Query: 384 PNVLPFLIFAGLLTVGLINSLFI 406 F++ LL +G + SLFI Sbjct: 369 GYAQTFILLGMLLFIGFVASLFI 391 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.331 0.142 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,981,704,791 Number of extensions: 70441056 Number of successful extensions: 305851 Number of sequences better than 1.0e-05: 742 Number of HSP's gapped: 307338 Number of HSP's successfully gapped: 752 Length of query: 413 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 275 Effective length of database: 1,760,596,133 Effective search space: 484163936575 Effective search space used: 484163936575 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 132 (55.5 bits)