BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0591.0017.p (277 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3J351.1 C3J351_9BACI Putative uncharacterized protein 313 8e-84 B7YCN5.1 B7YCN5_9BACI Putative uncharacterized protein 313 8e-84 Q9KBQ5.1 Q9KBQ5_BACHD BH1870 protein 301 3e-80 B1DGF3.1 B1DGF3_9BACL Putative uncharacterized protein 295 3e-78 A6BK08.1 A6BK08_9FIRM Putative uncharacterized protein 246 1e-63 >C3J351.1 C3J351_9BACI Putative uncharacterized protein Length = 433 Score = 313 bits (803), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 149/251 (59%), Positives = 187/251 (74%) Query: 1 MYGVDASKEGAQAYYDSLFELYAEWGVDLVKVDDIAASRLYDTHQPEIALISKAIERCGR 60 MYGVD KEGAQAYYDSLF+LYA+WGVD VKVDDIAAS+LY TH EI +I KAI+RCGR Sbjct: 150 MYGVDHRKEGAQAYYDSLFQLYAQWGVDFVKVDDIAASKLYGTHTEEIKMIRKAIDRCGR 209 Query: 61 PMVLSLSPGPAPVEYSDFFVEHANMWRVTXXXXXXXXXXXXXXXRCRKWQGVPQAGSWPD 120 PMVLSLSPGPAP++++ FVE+ANMWR+T RC KW + G WPD Sbjct: 210 PMVLSLSPGPAPLDHATLFVENANMWRMTDDFWDRWELLYDMFERCYKWCKLVGPGHWPD 269 Query: 121 CDMLPLGHIGIRSVDGGGEDRWTRFTRDEQLTMMSLWSIFRSPLIFGGELRDNDDWTLSL 180 DMLPLGHIGIRSVDGGG DR TRFT+DEQ TMM+LW IFRSPL+FGGELRDND+WTLSL Sbjct: 270 ADMLPLGHIGIRSVDGGGTDRMTRFTKDEQRTMMTLWIIFRSPLMFGGELRDNDEWTLSL 329 Query: 181 LTNREVLRLHRESCGAREALCKDELIVWTAGHSDGTRYAAVFNVGDTLLPVELALEEIGF 240 LTN EVL +H+ GAR+ +++ +VWT+ ++G ++ A+FN+ + V ++L+++G Sbjct: 330 LTNEEVLHVHQNGYGARQVYRENDHVVWTSQDAEGNQFVAMFNISEKRSVVSVSLKDLGC 389 Query: 241 SGSASGTELWS 251 +LW+ Sbjct: 390 MEPMKARDLWA 400 >B7YCN5.1 B7YCN5_9BACI Putative uncharacterized protein Length = 433 Score = 313 bits (803), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 149/251 (59%), Positives = 187/251 (74%) Query: 1 MYGVDASKEGAQAYYDSLFELYAEWGVDLVKVDDIAASRLYDTHQPEIALISKAIERCGR 60 MYGVD KEGAQAYYDSLF+LYA+WGVD VKVDDIAAS+LY TH EI +I KAI+RCGR Sbjct: 150 MYGVDHRKEGAQAYYDSLFQLYAQWGVDFVKVDDIAASKLYGTHTEEIKMIRKAIDRCGR 209 Query: 61 PMVLSLSPGPAPVEYSDFFVEHANMWRVTXXXXXXXXXXXXXXXRCRKWQGVPQAGSWPD 120 PMVLSLSPGPAP++++ FVE+ANMWR+T RC KW + G WPD Sbjct: 210 PMVLSLSPGPAPLDHATLFVENANMWRMTDDFWDRWELLYDMFERCYKWCKLVGPGHWPD 269 Query: 121 CDMLPLGHIGIRSVDGGGEDRWTRFTRDEQLTMMSLWSIFRSPLIFGGELRDNDDWTLSL 180 DMLPLGHIGIRSVDGGG DR TRFT+DEQ TMM+LW IFRSPL+FGGELRDND+WTLSL Sbjct: 270 ADMLPLGHIGIRSVDGGGTDRMTRFTKDEQRTMMTLWIIFRSPLMFGGELRDNDEWTLSL 329 Query: 181 LTNREVLRLHRESCGAREALCKDELIVWTAGHSDGTRYAAVFNVGDTLLPVELALEEIGF 240 LTN EVL +H+ GAR+ +++ +VWT+ ++G ++ A+FN+ + V ++L+++G Sbjct: 330 LTNEEVLHVHQNGYGARQVYRENDHVVWTSQDAEGNQFVAMFNISEKRSVVSVSLKDLGC 389 Query: 241 SGSASGTELWS 251 +LW+ Sbjct: 390 MEPMKARDLWA 400 >Q9KBQ5.1 Q9KBQ5_BACHD BH1870 protein Length = 432 Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 146/273 (53%), Positives = 186/273 (68%), Gaps = 7/273 (2%) Query: 1 MYGVDASKEGAQAYYDSLFELYAEWGVDLVKVDDIAASRLYDTHQPEIALISKAIERCGR 60 MYGVD +KEGAQ+YY+SLFELYA+WGVD VKVDDIAASRLYDTH EI +I +AI+ CGR Sbjct: 151 MYGVDPTKEGAQSYYNSLFELYAQWGVDFVKVDDIAASRLYDTHLEEIKMIQRAIQACGR 210 Query: 61 PMVLSLSPGPAPVEYSDFFVEHANMWRVTXXXXXXXXXXXXXXXRCRKWQGVPQAGSWPD 120 PMVLSLSPGPAP++Y+ F +ANMWR+T RC W+ G WPD Sbjct: 211 PMVLSLSPGPAPIKYAHHFKTNANMWRITDDFWDDWSLLYQMFERCEVWEKHIGTGHWPD 270 Query: 121 CDMLPLGHIGIRSVDGGGEDRWTRFTRDEQLTMMSLWSIFRSPLIFGGELRDNDDWTLSL 180 CDMLPLGHIGIRSVDG G DRWTRFT+DEQLTMM+LW+I RSPL+FGGELRDND+WTLSL Sbjct: 271 CDMLPLGHIGIRSVDGPGGDRWTRFTKDEQLTMMNLWAICRSPLMFGGELRDNDEWTLSL 330 Query: 181 LTNREVLRLHRESCGAREALCKDELIVWTAGHSDGTRYAAVFNVGDTLLPVELALEEIGF 240 LTN +L ++++S R +++ + W A +G Y A+FN+ D ++ L+ +G Sbjct: 331 LTNEGILSINQKSVLNRFVYREEDKVAWAANGRNGEAYVALFNLHDQQKTLQFRLDMVGI 390 Query: 241 SGSASGTELWSGTPAKIAAGVLQTTVPSHGVRL 273 + +W + LQ+ PS ++ Sbjct: 391 METVQLFNVWDRS-------FLQSLAPSESFQI 416 >B1DGF3.1 B1DGF3_9BACL Putative uncharacterized protein Length = 427 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 149/276 (53%), Positives = 190/276 (68%), Gaps = 5/276 (1%) Query: 1 MYGVDASKEGAQAYYDSLFELYAEWGVDLVKVDDIAASRLYD-THQPEIALISKAIERCG 59 MYGVDA KEGAQ YY+SLFE+YAEWGVD +KVDDIA S L+ H EI LI KAI+ G Sbjct: 150 MYGVDAKKEGAQEYYNSLFEMYAEWGVDYIKVDDIADSWLHGGAHLGEIELIRKAIDHVG 209 Query: 60 RPMVLSLSPGPAPVEYSDFFVEHANMWRVTXXXXXXXXXXXXXXXRCRKWQGVPQAGSWP 119 RP+VLSLSPGPAPV+++DF ++AN+WR+T RC+ W+G P+ G+WP Sbjct: 210 RPIVLSLSPGPAPVKHADFLEQNANLWRMTDDFWDRWPLLLDMFDRCKTWEGRPKPGNWP 269 Query: 120 DCDMLPLGHIGIRSVDGGGEDRWTRFTRDEQLTMMSLWSIFRSPLIFGGELRDNDDWTLS 179 DCDMLPLG IG+R DR T FTRDEQLTMM+LWSIFRSPL+ GGE+RDND+WTLS Sbjct: 270 DCDMLPLGRIGVRC---SHPDRMTNFTRDEQLTMMTLWSIFRSPLMMGGEMRDNDEWTLS 326 Query: 180 LLTNREVLRLHRESCGAREALCKDELIVWTAGHSDGTRYAAVFNVGDTLLPVELALEEIG 239 LLTNR+VL +HR S GA++ + +VWTA S+G RY A+FN G+ V ++ ++G Sbjct: 327 LLTNRDVLHMHRTSFGAKQVSRIGDRVVWTAEGSNGERYVALFNTGEEETEVSVSFGDLG 386 Query: 240 FSGSASGTE-LWSGTPAKIAAGVLQTTVPSHGVRLY 274 G AS + +WSG + L + + HG L+ Sbjct: 387 MDGEASSIKNVWSGEIIGTQSSSLSSVIAPHGAALF 422 >A6BK08.1 A6BK08_9FIRM Putative uncharacterized protein Length = 419 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 138/277 (49%), Positives = 170/277 (61%), Gaps = 8/277 (2%) Query: 1 MYGVDASKEGAQAYYDSLFELYAEWGVDLVKVDDIAASRLY-DTHQPEIALISKAIERCG 59 MYGVD S Q YYDSL ELYA WGVD +KVDDIA S +Y D+H+ EI I KAI++ G Sbjct: 147 MYGVDMSIPEGQLYYDSLMELYASWGVDFIKVDDIAYSTIYRDSHRKEIEGIRKAIDKTG 206 Query: 60 RPMVLSLSPGPAPVEYSDFFVEHANMWRVTXXXXXXXXXXXXXXXRCRKWQGVPQAGSWP 119 R +VLSLSPGPA ++ F ++ANMWR+T RC W + G+WP Sbjct: 207 REIVLSLSPGPARLQDGSFLQKNANMWRLTDDFWDEWELLYDMFDRCNYWSPFIRKGNWP 266 Query: 120 DCDMLPLGHIGIRSVDGGGEDRWTRFTRDEQLTMMSLWSIFRSPLIFGGELRDNDDWTLS 179 DCDMLPLGHIGIRS + G DR T FT+ EQ TM++LWSIF+SPL++GGEL D D WTLS Sbjct: 267 DCDMLPLGHIGIRSGERGKADRMTCFTKPEQKTMITLWSIFQSPLMYGGELADLDAWTLS 326 Query: 180 LLTNREVLRLHRESCGAREALCKDELIVWTAGHSDGTRYAAVFNVGDTLLPVELALEEIG 239 LLTN EV +HR G R+ DE IVW+ + + T Y A+FNV D + L E Sbjct: 327 LLTNTEVNEMHRTLEGQRQEYRDDEWIVWSGENKEST-YIAIFNVSDEKKEIPGKLTERY 385 Query: 240 FSGSASGTELWSGTPAKIAAGVLQTTVPSHGVRLYSF 276 A E+WSG K+ G + V +HG LY Sbjct: 386 LRKDAK--EIWSG--KKVTEGTEE--VENHGCVLYQM 416 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,701,896,420 Number of extensions: 67836800 Number of successful extensions: 161405 Number of sequences better than 1.0e-05: 245 Number of HSP's gapped: 161094 Number of HSP's successfully gapped: 245 Length of query: 277 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 143 Effective length of database: 1,798,280,193 Effective search space: 257154067599 Effective search space used: 257154067599 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)