BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0589.0018.p (169 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1WYM0.1 C1WYM0_9ACTO Zn-dependent oxidoreductase, NADPH:quinone... 108 2e-22 B5HLD2.1 B5HLD2_9ACTO Alcohol dehydrogenase zinc-binding domain-... 107 4e-22 C2BYM2.1 C2BYM2_LISGR Possible NADPH:quinone reductase EC=1.6.5.5 107 4e-22 C2QTY2.1 C2QTY2_BACCE Alcohol dehydrogenase zinc-binding domain ... 102 2e-20 C0X5Q7.1 C0X5Q7_ENTFA Possible NADPH:quinone reductase EC=1.6.5.5 102 2e-20 >C1WYM0.1 C1WYM0_9ACTO Zn-dependent oxidoreductase, NADPH:quinone reductase Length = 319 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 15/166 (9%) Query: 1 VGHVAVQLAKQHGAYVIATARDYNHDFVRGLGADEVIDYTKADFTTQITD-PVDIVLDTA 59 VGH+AVQLAK GA VI TA HDFVR LGADEVIDY DF + + PVD+VLD Sbjct: 164 VGHLAVQLAKSFGAEVIGTASAAKHDFVRSLGADEVIDYRTEDFAAVLRERPVDLVLDP- 222 Query: 60 KDASTFGTGLPGEIGEKNFSVIKDGGTYISVVAF--GINQYPKVRNIHAHFFQAQPNRTD 117 + G+ G ++ V+KDGG+Y+ +++ Q + R I A F +P+R Sbjct: 223 ---------IAGDTGRRSLDVLKDGGSYVCILSVDEATVQEGRRRGIRAEFTLVEPDRLG 273 Query: 118 FESIAHHMKGNKLKIHVNETFAFTAQGLHQAYRKSEELPKRGKIVI 163 +I + KL++ ++ F A+R+ E GKIV+ Sbjct: 274 LTAITDLVAEGKLRVELDSVFPLAEAA--AAHRRGETNQAAGKIVL 317 >B5HLD2.1 B5HLD2_9ACTO Alcohol dehydrogenase zinc-binding domain-containing protein Length = 311 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 15/165 (9%) Query: 1 VGHVAVQLAKQHGAYVIATARDYNHDFVRGLGADEVIDYTKADFTTQITDPVDIVLDTAK 60 VGHVAVQLAK+ GAYVI TAR HD++RGLGADE+IDYT DF T ++ PVD+VLD Sbjct: 158 VGHVAVQLAKEFGAYVIGTARTAKHDWLRGLGADELIDYTAGDFRTAVS-PVDVVLDLVG 216 Query: 61 DASTFGTGLPGEIGEKNFSVIKDGGTYI--SVVAFGINQYPKVRNIHAHFFQAQPNRTDF 118 G G ++ V+K GG I S+ Q R++ + A+P+ Sbjct: 217 ----------GAYGGRSLDVLKSGGLLIGASIDPGTDEQEAAERDLRYVWVTAEPDGRSL 266 Query: 119 ESIAHHMKGNKLKIHVNETFAFTAQGLHQAYRKSEELPKRGKIVI 163 E I ++ +L++ V T+ + A+R EE GK+V+ Sbjct: 267 EPITERIETGRLRVAVERTYPLSEAA--AAHRAIEEKRTTGKLVL 309 >C2BYM2.1 C2BYM2_LISGR Possible NADPH:quinone reductase EC=1.6.5.5 Length = 313 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 12/165 (7%) Query: 1 VGHVAVQLAKQHGAYVIATARDYNHDFVRGLGADEVIDYTKADFTTQITDPVDIVLDTAK 60 VG +A+Q AK GAYVI TA + NH V+ LGADEVIDY DF ++D +D+V DT Sbjct: 157 VGSLAIQFAKHAGAYVITTASERNHQLVKDLGADEVIDYKTTDFVDVLSD-IDVVFDT-- 213 Query: 61 DASTFGTGLPGEIGEKNFSVIKDG-GTYISVVAFGINQYPKVRNIHAHFFQAQPNRTDFE 119 + G++ K+ V++ G G +S+V +Y K + I A +PN + + Sbjct: 214 --------MGGDVQRKSLQVLRTGKGRLVSIVGLEDEEYAKEKGIKAESIWLEPNGQELQ 265 Query: 120 SIAHHMKGNKLKIHVNETFAFTAQGLHQAYRKSEELPKRGKIVIS 164 IA + +K V ETF F+ +GL+ A+ SE GKIVI+ Sbjct: 266 EIADLLADGSVKAIVGETFPFSEKGLYDAHALSETHHAVGKIVIT 310 >C2QTY2.1 C2QTY2_BACCE Alcohol dehydrogenase zinc-binding domain protein Length = 308 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 14/163 (8%) Query: 1 VGHVAVQLAKQHGAYVIATARDYNHDFVRGLGADEVIDYTKADFTTQITDPVDIVLDTAK 60 VG +A+Q+AK GA+V TA N +F++ LGAD VIDY K F ++D DIVLDT Sbjct: 157 VGSLAIQIAKSFGAFVATTASSKNEEFLKSLGADLVIDYKKDKFEELLSD-FDIVLDT-- 213 Query: 61 DASTFGTGLPGEIGEKNFSVIKDGGTYISVVAFGINQYPKVRNIHAHFFQAQPNRTDFES 120 + GE+ EK+F ++K GG ++S+V I KV+ I + F +PN E Sbjct: 214 --------IGGEVQEKSFQILKPGGVFVSIVHEPIQ---KVKEIKSGFLWLKPNGKQLEE 262 Query: 121 IAHHMKGNKLKIHVNETFAFTAQGLHQAYRKSEELPKRGKIVI 163 ++ + K+K +++ +F G+ +A+ SE+ RGKIV+ Sbjct: 263 LSDLIVNGKIKPIISKVVSFNEAGVREAHILSEDQHVRGKIVM 305 >C0X5Q7.1 C0X5Q7_ENTFA Possible NADPH:quinone reductase EC=1.6.5.5 Length = 161 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 12/164 (7%) Query: 1 VGHVAVQLAKQHGAYVIATARDYNHDFVRGLGADEVIDYTKADFTTQITDPVDIVLDTAK 60 VG A+QLAK+ GA+VI TA NH ++ +GADEVIDY +F +TD VD+V DT Sbjct: 5 VGTYAIQLAKEAGAHVITTASAKNHTLLKKIGADEVIDYHTTNFAEVLTD-VDLVFDT-- 61 Query: 61 DASTFGTGLPGEIGEKNFSVIK-DGGTYISVVAFGINQYPKVRNIHAHFFQAQPNRTDFE 119 + GE+ + +F+V+K + G +S+V Q +NI A QPN + Sbjct: 62 --------MGGEVQKNSFAVLKPNTGRLVSIVGIEDKQLAAEKNISAESIWLQPNGEQLQ 113 Query: 120 SIAHHMKGNKLKIHVNETFAFTAQGLHQAYRKSEELPKRGKIVI 163 IA M K+K + E F F+ QG++ A+ SE GKIV+ Sbjct: 114 KIADLMAAGKVKSIIGEVFPFSRQGIYDAHALSETHHAVGKIVV 157 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,018,381,388 Number of extensions: 41515906 Number of successful extensions: 98308 Number of sequences better than 1.0e-05: 565 Number of HSP's gapped: 98274 Number of HSP's successfully gapped: 565 Length of query: 169 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 44 Effective length of database: 1,883,069,328 Effective search space: 82855050432 Effective search space used: 82855050432 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)