BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0589.0017.p (151 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q8ES25.1 Q8ES25_OCEIH Zinc-binding oxidoreductase 109 7e-23 B9M2F1.1 B9M2F1_GEOSF Alcohol dehydrogenase GroES domain protein 108 2e-22 Q81MY4.1 Q81MY4_BACAN Alcohol dehydrogenase, zinc-containing 106 5e-22 C3P329.1 C3P329_BACAA Alcohol dehydrogenase, zinc-containing EC=... 106 5e-22 C3LBG2.1 C3LBG2_BACAC Alcohol dehydrogenase, zinc-containing EC=... 106 5e-22 >Q8ES25.1 Q8ES25_OCEIH Zinc-binding oxidoreductase Length = 311 Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 56/129 (43%), Positives = 82/129 (63%), Gaps = 10/129 (7%) Query: 11 MKAIALTSFGIPEVLKELELPVPSLTDTQVLIEMRASSINPADYLFRSGAILQSPMAHKF 70 MKAI + ++G + L E ++P P++ D Q+LIE A+SINP D+ R G + K Sbjct: 1 MKAIVIENYGHADELHEQDVPKPTINDNQILIEQYATSINPIDWKLREGYL-------KD 53 Query: 71 QDQLQLPMVLGNEVAGIVQEVGRKVTQFKPGDRVM---GMVQRGSYMDYVAVEEDHLAVI 127 + P++LG + AG+V EVG+ V+QFK GDRV +G+Y ++VAVEE +A I Sbjct: 54 GFNFEFPIILGWDSAGVVAEVGKNVSQFKVGDRVFSRPATTAQGTYAEFVAVEESRVAKI 113 Query: 128 PESLSFEEA 136 PE++SFEEA Sbjct: 114 PENVSFEEA 122 >B9M2F1.1 B9M2F1_GEOSF Alcohol dehydrogenase GroES domain protein Length = 311 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 87/129 (67%), Gaps = 10/129 (7%) Query: 11 MKAIALTSFGIPEVLKELELPVPSLTDTQVLIEMRASSINPADYLFRSGAILQSPMAHKF 70 MKA+A+ +G PEVL+ ++LP P++T VLIE+ A+S+NP D+ R G LQ + H+F Sbjct: 1 MKAVAIEKYGGPEVLQLMDLPKPAVTKRDVLIEIHAASVNPVDWKIREG-YLQDMLHHRF 59 Query: 71 QDQLQLPMVLGNEVAGIVQEVGRKVTQFKPGDRVMG---MVQRGSYMDYVAVEEDHLAVI 127 P++LG + AG+V + G +VT+FK GD+V + + G+Y +YVAV+E ++A+ Sbjct: 60 ------PLILGWDAAGVVVDTGPEVTKFKRGDKVFSRTDIARNGTYAEYVAVDEKYVAMK 113 Query: 128 PESLSFEEA 136 P ++SFE A Sbjct: 114 PANISFEGA 122 >Q81MY4.1 Q81MY4_BACAN Alcohol dehydrogenase, zinc-containing Length = 317 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 10/129 (7%) Query: 11 MKAIALTSFGIPEVLKELELPVPSLTDTQVLIEMRASSINPADYLFRSGAILQSPMAHKF 70 MKAI LT +G VL+E+E+ P L D VLIE+ A+ +NP D+ R G +LQ +++ F Sbjct: 1 MKAIGLTQYGDKSVLQEIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREG-LLQDVISYDF 59 Query: 71 QDQLQLPMVLGNEVAGIVQEVGRKVTQFKPGDRVMG---MVQRGSYMDYVAVEEDHLAVI 127 P+VLG +VAG+V +G+ VT FK GD V + + G+Y +YVAV+E ++A Sbjct: 60 ------PLVLGWDVAGVVAAIGKNVTVFKVGDEVYSRPDIERNGTYAEYVAVDEKYVAKK 113 Query: 128 PESLSFEEA 136 P +LSFEEA Sbjct: 114 PRNLSFEEA 122 >C3P329.1 C3P329_BACAA Alcohol dehydrogenase, zinc-containing EC=1.1.1.1 Length = 317 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 10/129 (7%) Query: 11 MKAIALTSFGIPEVLKELELPVPSLTDTQVLIEMRASSINPADYLFRSGAILQSPMAHKF 70 MKAI LT +G VL+E+E+ P L D VLIE+ A+ +NP D+ R G +LQ +++ F Sbjct: 1 MKAIGLTQYGDKSVLQEIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREG-LLQDVISYDF 59 Query: 71 QDQLQLPMVLGNEVAGIVQEVGRKVTQFKPGDRVMG---MVQRGSYMDYVAVEEDHLAVI 127 P+VLG +VAG+V +G+ VT FK GD V + + G+Y +YVAV+E ++A Sbjct: 60 ------PLVLGWDVAGVVAAIGKNVTVFKVGDEVYSRPDIERNGTYAEYVAVDEKYVAKK 113 Query: 128 PESLSFEEA 136 P +LSFEEA Sbjct: 114 PRNLSFEEA 122 >C3LBG2.1 C3LBG2_BACAC Alcohol dehydrogenase, zinc-containing EC=1.1.1.1 Length = 317 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 10/129 (7%) Query: 11 MKAIALTSFGIPEVLKELELPVPSLTDTQVLIEMRASSINPADYLFRSGAILQSPMAHKF 70 MKAI LT +G VL+E+E+ P L D VLIE+ A+ +NP D+ R G +LQ +++ F Sbjct: 1 MKAIGLTQYGDKSVLQEIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREG-LLQDVISYDF 59 Query: 71 QDQLQLPMVLGNEVAGIVQEVGRKVTQFKPGDRVMG---MVQRGSYMDYVAVEEDHLAVI 127 P+VLG +VAG+V +G+ VT FK GD V + + G+Y +YVAV+E ++A Sbjct: 60 ------PLVLGWDVAGVVAAIGKNVTVFKVGDEVYSRPDIERNGTYAEYVAVDEKYVAKK 113 Query: 128 PESLSFEEA 136 P +LSFEEA Sbjct: 114 PRNLSFEEA 122 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 759,988,420 Number of extensions: 29197125 Number of successful extensions: 89888 Number of sequences better than 1.0e-05: 3222 Number of HSP's gapped: 88644 Number of HSP's successfully gapped: 3223 Length of query: 151 Length of database: 3,060,696,203 Length adjustment: 113 Effective length of query: 38 Effective length of database: 1,996,121,508 Effective search space: 75852617304 Effective search space used: 75852617304 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)