BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0587.0017.p (202 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z4J3.1 C0Z4J3_BREBN Putative uncharacterized protein 297 4e-79 C3BKN7.1 C3BKN7_9BACI Ribosomal-protein-alanine N-acetyltransferase 282 2e-74 C3ALV2.1 C3ALV2_BACMY Ribosomal-protein-alanine N-acetyltransferase 281 2e-74 A8FAL0.1 A8FAL0_BACP2 Acetyltransferase 269 9e-71 B1HQ86.1 B1HQ86_LYSSC Ribosomal-protein-alanine N-acetyltransferase 268 2e-70 >C0Z4J3.1 C0Z4J3_BREBN Putative uncharacterized protein Length = 191 Score = 297 bits (761), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 138/189 (73%), Positives = 168/189 (88%) Query: 1 VNTHHLFSQFPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIG 60 +N LF+QFP+L S+ TL+KIEE+HL+EVF IYSND VF YCGIIPKHNKATV +MIG Sbjct: 1 MNVDVLFNQFPILESDRFTLKKIEEQHLDEVFEIYSNDHVFTYCGIIPKHNKATVKSMIG 60 Query: 61 HFERDFHKKSRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEA 120 HFERD+ KKS++KWGIFAN++ D L+GI+EAFDF+QKV+M+TIGYFL+EAHWGKG+A+EA Sbjct: 61 HFERDYLKKSKIKWGIFANDNPDHLLGIMEAFDFHQKVNMVTIGYFLSEAHWGKGVATEA 120 Query: 121 VSRVVRFLFQEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIY 180 VS ++ FLF +V VNRIQAEVMP NE SK+VLLKNGF EGTLRQATLWSGKGIVD+EIY Sbjct: 121 VSLLLHFLFMDVNVNRIQAEVMPQNETSKKVLLKNGFMKEGTLRQATLWSGKGIVDLEIY 180 Query: 181 GLLQEEYKK 189 G+L+E+Y+K Sbjct: 181 GMLKEDYEK 189 >C3BKN7.1 C3BKN7_9BACI Ribosomal-protein-alanine N-acetyltransferase Length = 192 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 130/192 (67%), Positives = 159/192 (82%) Query: 1 VNTHHLFSQFPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIG 60 +N +F FPVL S +L L+KIEE HL+E++ IY ND VFEYCGIIPKHN TV MIG Sbjct: 1 MNIEMVFGDFPVLESVNLVLRKIEEVHLQELYSIYDNDKVFEYCGIIPKHNLQTVRKMIG 60 Query: 61 HFERDFHKKSRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEA 120 HF+RD+HKKSR+KWGIF N D LVGIIE+ DFNQKV+M++IGYFLAE +WGKG+A+E+ Sbjct: 61 HFDRDYHKKSRIKWGIFQKNQSDKLVGIIESMDFNQKVNMVSIGYFLAEDYWGKGIATES 120 Query: 121 VSRVVRFLFQEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIY 180 V VV+FLF+EV VNRIQAEVMP NEVSK+VLLKNGF EG LRQA+LWSGKG++D+EIY Sbjct: 121 VRMVVKFLFEEVNVNRIQAEVMPVNEVSKKVLLKNGFIKEGVLRQASLWSGKGVIDLEIY 180 Query: 181 GLLQEEYKKERN 192 G+L+E+Y + N Sbjct: 181 GILKEDYIQNFN 192 >C3ALV2.1 C3ALV2_BACMY Ribosomal-protein-alanine N-acetyltransferase Length = 192 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 130/192 (67%), Positives = 159/192 (82%) Query: 1 VNTHHLFSQFPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIG 60 +N +F FPVL S +L L+KIEE HL+E++ IY ND VFEYCGIIPKHN TV MIG Sbjct: 1 MNIEMVFGDFPVLESVNLVLRKIEEVHLQELYSIYDNDRVFEYCGIIPKHNLQTVRKMIG 60 Query: 61 HFERDFHKKSRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEA 120 HF+RD+HKKSR+KWGIF N D LVGIIE+ DFNQKV+M++IGYFLAE +WGKG+A+E+ Sbjct: 61 HFDRDYHKKSRIKWGIFQKNQSDKLVGIIESMDFNQKVNMVSIGYFLAEDYWGKGIATES 120 Query: 121 VSRVVRFLFQEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIY 180 V VV+FLF+EV VNRIQAEVMP NEVSK+VLLKNGF EG LRQA+LWSGKG++D+EIY Sbjct: 121 VRMVVKFLFEEVNVNRIQAEVMPVNEVSKKVLLKNGFIKEGVLRQASLWSGKGVIDLEIY 180 Query: 181 GLLQEEYKKERN 192 G+L+E+Y + N Sbjct: 181 GILKEDYIQNFN 192 >A8FAL0.1 A8FAL0_BACP2 Acetyltransferase Length = 191 Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 124/182 (68%), Positives = 150/182 (82%) Query: 6 LFSQFPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIGHFERD 65 LF FPV+ S+++ L+K+EE HL E+F IY ND VF++CGIIPKHN TV MIGHFERD Sbjct: 6 LFGTFPVVASKNILLKKVEEHHLPELFSIYDNDAVFQHCGIIPKHNLQTVKKMIGHFERD 65 Query: 66 FHKKSRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVV 125 + KKSR+KWGIF N TLVGIIE D NQKV+ +TIGYFLAE HWGKG+A+EAVS +V Sbjct: 66 YTKKSRVKWGIFQKNMPHTLVGIIEIMDLNQKVNAVTIGYFLAEEHWGKGIATEAVSTLV 125 Query: 126 RFLFQEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIYGLLQE 185 FLF+E+++NRIQAEVMPANEVSK+VLLKNGF EG LRQA LWSGKG+VD+EIY +L+ Sbjct: 126 TFLFEEIDINRIQAEVMPANEVSKKVLLKNGFIKEGLLRQAVLWSGKGVVDLEIYSMLKA 185 Query: 186 EY 187 +Y Sbjct: 186 DY 187 >B1HQ86.1 B1HQ86_LYSSC Ribosomal-protein-alanine N-acetyltransferase Length = 193 Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 125/182 (68%), Positives = 152/182 (83%) Query: 6 LFSQFPVLVSEHLTLQKIEERHLEEVFGIYSNDTVFEYCGIIPKHNKATVATMIGHFERD 65 +F+QFP+L + LTL+KIE H+E++F IY N+ VFE+CGIIPKHN TV MIGHFERD Sbjct: 6 VFTQFPLLHTTSLTLKKIEASHVEDLFAIYDNNKVFEFCGIIPKHNLQTVQKMIGHFERD 65 Query: 66 FHKKSRLKWGIFANNDKDTLVGIIEAFDFNQKVDMITIGYFLAEAHWGKGLASEAVSRVV 125 F KKSR+KWGIF + + LVGIIEA DFNQKV+M+TIGY+LAE WGKG+A++AV VV Sbjct: 66 FKKKSRIKWGIFEASHSNKLVGIIEAMDFNQKVNMVTIGYYLAEDFWGKGIATKAVEMVV 125 Query: 126 RFLFQEVEVNRIQAEVMPANEVSKRVLLKNGFKYEGTLRQATLWSGKGIVDVEIYGLLQE 185 +L +EV+VNRIQAEVMP NE SK+VLLKNGF EG LRQATLWSGKG+VD+EIYGLL+E Sbjct: 126 NYLIEEVQVNRIQAEVMPLNEPSKKVLLKNGFINEGLLRQATLWSGKGVVDLEIYGLLKE 185 Query: 186 EY 187 +Y Sbjct: 186 DY 187 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,170,928,481 Number of extensions: 46135060 Number of successful extensions: 102603 Number of sequences better than 1.0e-05: 1479 Number of HSP's gapped: 102634 Number of HSP's successfully gapped: 1479 Length of query: 202 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 73 Effective length of database: 1,845,385,268 Effective search space: 134713124564 Effective search space used: 134713124564 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)