BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0084.p (176 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KI99.1 B3KI99_9BACI Putative uncharacterized protein 211 3e-53 B1DLV1.1 B1DLV1_9BACL Putative uncharacterized protein 154 4e-36 C0ZFM6.1 C0ZFM6_BREBN Putative uncharacterized protein 109 1e-22 C5D8V0.1 C5D8V0_9BACI Putative uncharacterized protein 67 5e-10 A6CTB7.1 A6CTB7_9BACI Putative uncharacterized protein 56 2e-06 >B3KI99.1 B3KI99_9BACI Putative uncharacterized protein Length = 248 Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 107/176 (60%), Positives = 122/176 (69%), Gaps = 1/176 (0%) Query: 1 VLLQVLSSSEVPPAVKEAAGXXXXXXXXXXXXXNTDRTAPFAQVTMFLPLRGPDGQETAS 60 VLLQVLSS + PPA+KEAA NTDRTAPFAQ+T+F+PL G DG++TAS Sbjct: 74 VLLQVLSSQDAPPALKEAAQQVIQHLTGQQLLLNTDRTAPFAQITLFIPLHGADGEQTAS 133 Query: 61 VHIQSRRGRKGELDAANCRLWFDLDMKQLGQTLVDVQVVDRIVSLKLHNDTPWVLELLEE 120 VHIQSRRGRKGELDA NCRL FDLDMK LGQTL+DVQVVDRIVSL ND + EL E Sbjct: 134 VHIQSRRGRKGELDATNCRLLFDLDMKFLGQTLIDVQVVDRIVSLNFRNDQTFAAELFEG 193 Query: 121 RKEEIGAAVEAIGYQLLSLRTEPLPQXXXXXXXXXXXXXKLADYVPDSYKGVDYRI 176 K+E+ AV +IGYQLLS++TEPLP A+Y P YKGVD RI Sbjct: 194 TKQELAQAVSSIGYQLLSVKTEPLP-LDSPPAAEDSVQGTAAEYTPQVYKGVDMRI 248 >B1DLV1.1 B1DLV1_9BACL Putative uncharacterized protein Length = 345 Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 1 VLLQVLSSSEVPPAVKEAAGXXXXXXXXXXXXXNTDRT-APFAQVTMFLPLRGPDGQETA 59 LL + +SS+ PPA++E A + +R A F+ +TMF+PL GPDG +TA Sbjct: 169 TLLAIAASSDAPPALRETAQQLVQQITGQQLLLSPERNGAVFSHLTMFVPLNGPDGNQTA 228 Query: 60 SVHIQSRRGRKGELDAANCRLWFDLDMKQLGQTLVDVQVVDRIVSLKLHNDTPWVLELLE 119 SVHIQ+RRG++G+LDA NCRL FDL MK LG TLVDV V+D+IVSL L ND P + L++ Sbjct: 229 SVHIQTRRGKQGQLDAENCRLLFDLSMKTLGPTLVDVNVMDKIVSLTLWNDHPAIAALVD 288 Query: 120 ERKEEIGAAVEAIGYQLLSLRTEPLPQXXXXXXXXXXXXXKLADYVPDSYKGVDYR 175 + EI A++ GYQLLSLR P A +V YKGVD R Sbjct: 289 SSRTEINASLNQAGYQLLSLRATPTRGDSDEGEGVKRIMPDPAQFVNTRYKGVDIR 344 >C0ZFM6.1 C0ZFM6_BREBN Putative uncharacterized protein Length = 630 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 85/137 (62%), Gaps = 6/137 (4%) Query: 41 FAQVTMFLPLRGPDGQETASVHIQSRRGRKGELDAANCRLWFDLDMKQLGQTLVDVQVVD 100 +Q+ M +P+R +G ETA V I+S++ G+LD NCRL+F L+++ +G T++DV +V+ Sbjct: 499 LSQIVMQIPIRQGEGDETAFVQIESKKKGSGQLDPENCRLFFHLELQGMGTTMIDVSIVN 558 Query: 101 RIVSLKLHNDTPWVLELLEERKEEIGAAVEAIGYQLLSLRTEPLP-QXXXXXXXXXXXXX 159 RIV+L++ NDTPWV L++ K+ ++ +GY L ++R +P+P + Sbjct: 559 RIVNLQIFNDTPWVEALIQGAKDRFADQLQDVGYHLSAMRVQPVPAERGKSTSPIQTKGP 618 Query: 160 KLADYVPDSYKGVDYRI 176 LAD YKGVD R+ Sbjct: 619 ILAD-----YKGVDLRV 630 >C5D8V0.1 C5D8V0_9BACI Putative uncharacterized protein Length = 524 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 10/138 (7%) Query: 39 APFAQVTMFLPLRGPDGQETASVHIQSRRGRKGELDAANCRLWFDLDMKQLGQTLVDVQV 98 P V M +P++ + + ++H Q +R + G++D C + F L + +L +T+VDV+V Sbjct: 397 GPLQHVFMQIPIQIGEQRTDVAIHWQGKRQKDGKIDPDYCHIVFCLLLDKLKETVVDVRV 456 Query: 99 VDRIVSLKLHNDTPWVLELLEERKEEIGAAVEAIGYQLLSLRTEPLPQXXXXXXXXXXXX 158 RIV + + ND P +L + E + + +EA GY L +L+ E Q Sbjct: 457 QQRIVHISIFNDHPHLLRIANEFQPMLKERLEAHGYTLSALKIETSKQKKMPIDIV---- 512 Query: 159 XKLADYVPDSYKGVDYRI 176 Y GVDYRI Sbjct: 513 ------FQQRYNGVDYRI 524 >A6CTB7.1 A6CTB7_9BACI Putative uncharacterized protein Length = 593 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 7/109 (6%) Query: 35 TDRTAPFAQVTMFLPLRGPDGQETASVHIQSRRGRKGELDAANCRLWFDLDMKQLGQTLV 94 + P Q+ +PL + + + R+ KG++D CR+ F L+++ + + +V Sbjct: 458 SGENGPLQQIVYQVPLTWMNQKTDVTFQWSGRKTAKGQIDPEFCRVLFYLELEAISEVIV 517 Query: 95 DVQVVDRIVSLKLHNDTPWVLEL-------LEERKEEIGAAVEAIGYQL 136 D+ V ++++SL ++ND P + EL ++E E++G V I +++ Sbjct: 518 DMGVQNKVISLNIYNDNPLLKELSAPFSPVMKEGLEKLGYKVSVINFKV 566 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 803,565,897 Number of extensions: 26111846 Number of successful extensions: 63359 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 63365 Number of HSP's successfully gapped: 8 Length of query: 176 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 50 Effective length of database: 1,873,648,313 Effective search space: 93682415650 Effective search space used: 93682415650 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 126 (53.1 bits)