BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0082.p (128 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIA1.1 B3KIA1_9BACI Putative uncharacterized protein 121 2e-26 B1DLV3.1 B1DLV3_9BACL Putative uncharacterized protein 101 2e-20 B7R9S5.1 B7R9S5_9THEO Putative uncharacterized protein 91 3e-17 Q8R5S3.1 Y1452_THETN UPF0102 protein TTE1452 91 4e-17 C0QTY9.1 Y362_PERMH UPF0102 protein PERMA_0362 88 2e-16 >B3KIA1.1 B3KIA1_9BACI Putative uncharacterized protein Length = 127 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/99 (57%), Positives = 71/99 (71%) Query: 30 QGYRIIDRNWRCRSGELDIIAEYGGVLIFVEVRSRSGSPLQGTPEESVDERKIRQVRAIA 89 +GYRI+DRNWRCR GELDI+AE G L+ +EVRSRSG+ GTP ESV+ RK+ QVR A Sbjct: 29 KGYRILDRNWRCRFGELDIVAETGETLVVIEVRSRSGTTRFGTPSESVNARKVMQVRNTA 88 Query: 90 RVYLHMKNQEERRVSFDVITVMLNEKLGISSLHHIREAF 128 + Y+H K ER + FDVI+VML E + S+ HI AF Sbjct: 89 QQYVHQKRYYERTIRFDVISVMLREDMTADSMDHIENAF 127 >B1DLV3.1 B1DLV3_9BACL Putative uncharacterized protein Length = 122 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/103 (49%), Positives = 66/103 (64%) Query: 26 YLSAQGYRIIDRNWRCRSGELDIIAEYGGVLIFVEVRSRSGSPLQGTPEESVDERKIRQV 85 YL +GY +I+RNWRCRSGE+DIIA L+FVEVR+R GT ESVD RK +QV Sbjct: 20 YLEKEGYNVIERNWRCRSGEIDIIATIDHTLVFVEVRTRRTGGRFGTAAESVDRRKQQQV 79 Query: 86 RAIARVYLHMKNQEERRVSFDVITVMLNEKLGISSLHHIREAF 128 +A+VYL M+ + FDVI V ++ IS + HI+ AF Sbjct: 80 ALVAQVYLRMRQLTYPPMRFDVIAVTMDRNDSISEVKHIKAAF 122 >B7R9S5.1 B7R9S5_9THEO Putative uncharacterized protein Length = 137 Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 71/104 (68%), Gaps = 2/104 (1%) Query: 26 YLSAQGYRIIDRNWRCRSGELDIIAEYGGVLIFVEVRSRSGSPLQGTPEESVDERKIRQV 85 YLS +GY+I+++N++C+ GE+D+IA Y ++FVEV++R+ G P E+VD K +++ Sbjct: 35 YLSKKGYKILEKNFKCKVGEIDLIALYKNQIVFVEVKTRTSVNF-GLPSEAVDFHKQQKI 93 Query: 86 RAIARVYLHMKNQEERRVSFDVITVMLN-EKLGISSLHHIREAF 128 IA+VY+ N ++ + FDVI V LN EKL + ++HI AF Sbjct: 94 VKIAQVYIASSNFKQYQPRFDVIEVYLNPEKLTLEKVNHILNAF 137 >Q8R5S3.1 Y1452_THETN UPF0102 protein TTE1452 Length = 122 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 71/104 (68%), Gaps = 2/104 (1%) Query: 26 YLSAQGYRIIDRNWRCRSGELDIIAEYGGVLIFVEVRSRSGSPLQGTPEESVDERKIRQV 85 YLS +GY+I+++N++C+ GE+D+IA Y ++FVEV++R+ G P E+VD K +++ Sbjct: 20 YLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTSVNF-GLPSEAVDFHKQQKI 78 Query: 86 RAIARVYLHMKNQEERRVSFDVITVMLN-EKLGISSLHHIREAF 128 IA+VY+ N ++ + FD+I V LN EKL + ++HI AF Sbjct: 79 VKIAQVYIASSNFKQYQPRFDIIEVYLNPEKLTLEKVNHILNAF 122 >C0QTY9.1 Y362_PERMH UPF0102 protein PERMA_0362 Length = 116 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/103 (43%), Positives = 70/103 (67%), Gaps = 7/103 (6%) Query: 26 YLSAQGYRIIDRNWRCRSGELDIIAEYGGVLIFVEVRSRSGSPLQGTPEESVDERKIRQV 85 YL GYRI++RN+R R GE+DIIAE G ++ VEVRS+ GS G PEES+D +K+R++ Sbjct: 17 YLRNSGYRILERNFRSRFGEIDIIAEDNGTIVIVEVRSK-GSTGYGYPEESIDHKKVRKI 75 Query: 86 RAIARVYLHMKNQEERRVSFDVITVMLNEKLGISSLHHIREAF 128 A+ YL ++ + ++V FD+I+++ N ++ HI+ AF Sbjct: 76 IKTAQFYLLKRDIKGKQVRFDIISIVNN------NIFHIKNAF 112 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 683,596,443 Number of extensions: 23423144 Number of successful extensions: 48105 Number of sequences better than 1.0e-05: 394 Number of HSP's gapped: 48097 Number of HSP's successfully gapped: 394 Length of query: 128 Length of database: 3,060,696,203 Length adjustment: 93 Effective length of query: 35 Effective length of database: 2,184,541,808 Effective search space: 76458963280 Effective search space used: 76458963280 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)