BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0586.0079.p
         (50 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIA4.1 B3KIA4_9BACI Mg chelatase, subunit ChlI                       60   6e-08

>B3KIA4.1 B3KIA4_9BACI Mg chelatase, subunit ChlI
          Length = 536

 Score = 60.1 bits (144), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/31 (80%), Positives = 30/31 (96%)

Query: 5  MYGKMHSACLNGIEGVMIGVEIDLANGLPQT 35
          MYGK+HSACL+GI+GV+I VE+DLANGLPQT
Sbjct: 1  MYGKLHSACLHGIDGVIIQVEVDLANGLPQT 31


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.325    0.145    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 278,280,654
Number of extensions: 6897044
Number of successful extensions: 11301
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 11301
Number of HSP's successfully gapped: 1
Length of query: 50
Length of database: 3,060,696,203
Length adjustment: 23
Effective length of query: 27
Effective length of database: 2,844,012,858
Effective search space: 76788347166
Effective search space used: 76788347166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 126 (53.1 bits)