BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0586.0078.p
         (91 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIA4.1 B3KIA4_9BACI Mg chelatase, subunit ChlI                       79   1e-13
C0WCB8.1 C0WCB8_9FIRM Magnisium chelatase                              72   2e-11
B2J9P5.1 B2J9P5_NOSP7 Mg chelatase, subunit ChlI                       70   8e-11
A4AH11.1 A4AH11_9ACTN Competence protein M                             68   3e-10
C3PH55.1 C3PH55_CORA7 Putative uncharacterized protein                 67   5e-10

>B3KIA4.1 B3KIA4_9BACI Mg chelatase, subunit ChlI
          Length = 536

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 47/60 (78%)

Query: 4   AENLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAEH 63
           A+ +L+IGELALDG+LRPVTGVLPMVE A++ G   VL+P  NAAEAALI G+ +Y   H
Sbjct: 100 ADRILIIGELALDGTLRPVTGVLPMVEQAQKEGYAGVLLPRENAAEAALIGGIEVYGLGH 159


>C0WCB8.1 C0WCB8_9FIRM Magnisium chelatase
          Length = 508

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 44/63 (69%)

Query: 1   MPGAENLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYA 60
           +P  +  + +GELALDGSLRPV+G+LPM+  AR  G  ++ +PAGNA E  L+ G+ ++ 
Sbjct: 97  LPKDDAPVFVGELALDGSLRPVSGILPMILRARDEGRGSIFIPAGNAEEGELVDGINVFT 156

Query: 61  AEH 63
           A H
Sbjct: 157 AHH 159


>B2J9P5.1 B2J9P5_NOSP7 Mg chelatase, subunit ChlI
          Length = 509

 Score = 69.7 bits (169), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 44/58 (75%)

Query: 6   NLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAEH 63
           + L +GE++LDGSLRPV GVLP+  AA++ G+  +++PA NA EAA++ G+ +Y  +H
Sbjct: 102 DYLFLGEMSLDGSLRPVAGVLPIAAAAQKMGIAGLVIPADNAQEAAVVQGLVVYGCKH 159


>A4AH11.1 A4AH11_9ACTN Competence protein M
          Length = 511

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 41/56 (73%)

Query: 5   ENLLLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYA 60
           + +L IGEL LDG LRPV GVLP V AA RAG T V+VP+GNA EAAL+  M + A
Sbjct: 102 DRVLHIGELGLDGRLRPVNGVLPAVLAASRAGFTTVMVPSGNADEAALVPDMRVIA 157


>C3PH55.1 C3PH55_CORA7 Putative uncharacterized protein
          Length = 507

 Score = 67.0 bits (162), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 42/55 (76%)

Query: 8   LLIGELALDGSLRPVTGVLPMVEAARRAGLTAVLVPAGNAAEAALISGMTIYAAE 62
           L++GEL LDG +RPV+G++P + AAR  G   +++P GNAAEAAL+ GMT+  AE
Sbjct: 104 LILGELGLDGQVRPVSGIIPAILAARSQGYDTLIIPVGNAAEAALVPGMTVLVAE 158


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.130    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 448,713,592
Number of extensions: 13201747
Number of successful extensions: 55630
Number of sequences better than 1.0e-05: 289
Number of HSP's gapped: 55869
Number of HSP's successfully gapped: 289
Length of query: 91
Length of database: 3,060,696,203
Length adjustment: 60
Effective length of query: 31
Effective length of database: 2,495,435,303
Effective search space: 77358494393
Effective search space used: 77358494393
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)