BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0031.p (467 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIF1.1 B3KIF1_9BACI Putative uncharacterized protein 637 e-180 B1DLP0.1 B1DLP0_9BACL Putative uncharacterized protein 512 e-143 C0ZF71.1 C0ZF71_BREBN Putative uncharacterized protein 371 e-101 A3DCQ6.1 A3DCQ6_CLOTH Putative uncharacterized protein 273 2e-71 B4BHR1.1 B4BHR1_CLOTM Putative uncharacterized protein 268 1e-69 >B3KIF1.1 B3KIF1_9BACI Putative uncharacterized protein Length = 469 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 309/465 (66%), Positives = 383/465 (82%), Gaps = 2/465 (0%) Query: 5 YVLSQYISINFSEDKGIAYLQFSKKDENFSCTVEDLESFLHSHNIRYGIQRDIVQRISSN 64 Y L QY S++ S+DK +AY+QF+K +++FSC+VE LE FL SH IRYGIQ D ++RI+ + Sbjct: 5 YALDQYFSVSLSDDKVVAYIQFTKWEKDFSCSVEALEQFLRSHQIRYGIQYDTLRRIADH 64 Query: 65 PEEYFFSRVPIAIGEPAVNGTDGRVVLTVDL--EEDRKPLEKADGKVDYKDLVRLHNVLK 122 EEY +SR PIA+G +G +G++ TVD E + KPLE DGKVD+K+++RL+NV K Sbjct: 65 GEEYQYSRTPIAMGTEPTHGQNGKIQFTVDFGNETNLKPLEDEDGKVDFKEVIRLNNVKK 124 Query: 123 GQIIAKIIPPEPGKSGTMVTGEELPFRPGKEAHFKVGKNVLVDQEETAMYAAIDGLVTLT 182 GQ++A IPP G GT VTGEE+P +PGKEAHFKVGKNV+V+ E++AMYAA+DGL+T T Sbjct: 125 GQLLATRIPPTKGVPGTAVTGEEIPSKPGKEAHFKVGKNVVVNAEKSAMYAALDGLLTKT 184 Query: 183 DKGKINVFPVYEVNGDVDYSTGNIDFVGTVVIRGNVLTGFTVKSAGDIRVVGGVEGAELX 242 +KGKINVFPVYE+NGDVDYS GNIDFVGTVVIRGNVLTGF +K+AGDIRV G VEGAEL Sbjct: 185 EKGKINVFPVYEINGDVDYSIGNIDFVGTVVIRGNVLTGFKIKAAGDIRVTGFVEGAELE 244 Query: 243 XXXXXXXXXXXXXYNKGLVSAGKNVKVSFIQDGNVVAGEDVIVTQSVMHSNIKAGRDVLC 302 YNKG V AG++VK SFIQDGNVVAG V V+QS+MHSNI+A +++ C Sbjct: 245 AEGSIDISGGIIGYNKGYVKAGQDVKSSFIQDGNVVAGASVFVSQSIMHSNIRAVQNIEC 304 Query: 303 NGAKGLIVGGIVQAGERVVARTIGNTMSTATAIEVGVVPELRNEINELRQELRHLLENED 362 NG KGL+VGGI+QAGE+VVARTIGN+MSTAT IEVGV+PELRNE+ +LR +L+ LE+ D Sbjct: 305 NGMKGLVVGGILQAGEKVVARTIGNSMSTATVIEVGVLPELRNELADLRAQLKLSLESMD 364 Query: 363 KTNKALYLLNQLANNGQLSPDKVALRVKLNATKQSHMREEKKIKERVLEIERMLEDTGRA 422 KT+KALYLLNQLA++GQLSPDK+ALR+KLNATK+S+M E+ IKER+LEIE+MLEDTG+A Sbjct: 365 KTDKALYLLNQLASSGQLSPDKLALRIKLNATKKSNMAEQADIKERMLEIEKMLEDTGKA 424 Query: 423 RVEVIKTIYGGSKIVIGRYTRFVKDPTERVTFIYSDGDITMTPNL 467 RV V+KTIYGG+KIVIGRYTRFVKDPT+RV+F Y +GDITM P L Sbjct: 425 RVNVVKTIYGGAKIVIGRYTRFVKDPTQRVSFYYHEGDITMVPLL 469 >B1DLP0.1 B1DLP0_9BACL Putative uncharacterized protein Length = 467 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 259/462 (56%), Positives = 335/462 (72%), Gaps = 1/462 (0%) Query: 5 YVLSQYISINFSEDKGIAYLQFSKKDENFSCTVEDLESFLHSHNIRYGIQRDIVQRISSN 64 ++L Y+ I S DK A L F++ E+F CT LE F+ S + YGI+ ++ I +N Sbjct: 4 HLLESYLRIQISADKLSALLTFNRITEDFDCTPGQLERFVRSKGVVYGIRTSLLNEICTN 63 Query: 65 PEEYFFSRVPIAIGEPAVNGTDGRVVLTVDLEED-RKPLEKADGKVDYKDLVRLHNVLKG 123 Y + IA+G PA G DG + D++E ++P E DGKVD+K++ RL NV +G Sbjct: 64 TLAYCKEQTLIAVGNPATPGKDGSIRFAYDMQEQTQRPAELEDGKVDFKEVSRLKNVKRG 123 Query: 124 QIIAKIIPPEPGKSGTMVTGEELPFRPGKEAHFKVGKNVLVDQEETAMYAAIDGLVTLTD 183 Q+IA+ + G G MVTG+E+P + GK+A FKVGKNV+V++ +TAMYA IDGL+T+TD Sbjct: 124 QLIAERVDALFGSPGMMVTGDEIPAKQGKQARFKVGKNVVVNENQTAMYALIDGLITITD 183 Query: 184 KGKINVFPVYEVNGDVDYSTGNIDFVGTVVIRGNVLTGFTVKSAGDIRVVGGVEGAELXX 243 K K+NVFPVYEVNGDVDY GNIDFVGTVVIRGNVL+GF VK++GDIRV+GGVEGAEL Sbjct: 184 KEKVNVFPVYEVNGDVDYRVGNIDFVGTVVIRGNVLSGFRVKASGDIRVIGGVEGAELES 243 Query: 244 XXXXXXXXXXXXYNKGLVSAGKNVKVSFIQDGNVVAGEDVIVTQSVMHSNIKAGRDVLCN 303 NKG V A KNVK SFIQD NV+AGEDV+V+QS+MHS+++AGR+V+C Sbjct: 244 EGSIEITGGIMAGNKGYVKAQKNVKSSFIQDSNVIAGEDVLVSQSIMHSHVRAGRNVICQ 303 Query: 304 GAKGLIVGGIVQAGERVVARTIGNTMSTATAIEVGVVPELRNEINELRQELRHLLENEDK 363 G+KGLIVGG +QA E+V AR IGNTMSTATAIEVGV PE R+E+ ELR LR ++ DK Sbjct: 304 GSKGLIVGGSIQAVEQVSARVIGNTMSTATAIEVGVQPESRSELQELRLTLRKHMDAIDK 363 Query: 364 TNKALYLLNQLANNGQLSPDKVALRVKLNATKQSHMREEKKIKERVLEIERMLEDTGRAR 423 T KAL +L+Q A QL+ K+A+R+KL AT++ E +I+ER+LEIER LEDT +A+ Sbjct: 364 TEKALAILDQQAAMDQLNDQKMAMRIKLGATRRQTTAEIDRIRERILEIERTLEDTDKAK 423 Query: 424 VEVIKTIYGGSKIVIGRYTRFVKDPTERVTFIYSDGDITMTP 465 V+V T+YGG KIVIGRYTRF+KDP +RV+F Y+DGDI P Sbjct: 424 VDVSHTVYGGIKIVIGRYTRFIKDPVQRVSFRYTDGDIVQLP 465 >C0ZF71.1 C0ZF71_BREBN Putative uncharacterized protein Length = 471 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 194/427 (45%), Positives = 281/427 (65%), Gaps = 3/427 (0%) Query: 39 DLESFLHSHNIRYGIQRDIVQRISSNPEEYFFSRVPIAIGEPAVNGTDGRV--VLTVDLE 96 D+ L + N++YGI D+V+ I + P +Y +RV +A G V GTDG + + Sbjct: 40 DVYKALQASNVKYGILDDVVRDICTLPAKYANARVKVAQGVAPVAGTDGTIEYPYLASIN 99 Query: 97 EDRKPLEKADGKVDYKDLVRLHNVLKGQIIAKIIPPEPGKSGTMVTGEELPFRPGKEAHF 156 E P E DG+VD+ ++ + NV KGQ++A+ IP G+ GT VTGE + + GKE + Sbjct: 100 EGEGPKELEDGRVDFYNVTTIPNVAKGQLLARKIPASQGEPGTAVTGEPIAPKAGKEINM 159 Query: 157 KVGKNVLVDQEETAMYAAIDGLVTLTDKGKINVFPVYEVNGDVDYSTGNIDFVGTVVIRG 216 K GKNV+++QE T +YAAIDG V+ T++ K+NVFPV+EVNGDVD+ GNIDFVGTVVIRG Sbjct: 160 KPGKNVVLNQERTMLYAAIDGQVSFTEQSKMNVFPVFEVNGDVDFGVGNIDFVGTVVIRG 219 Query: 217 NVLTGFTVKSAGDIRVVGGVEGAELXXXXXXXXXXXXXXYNKGLVSAGKNVKVSFIQDGN 276 NVL GF VKS+GDIRV+G VEGAEL +KG + AGK+V+ SFIQ+ N Sbjct: 220 NVLNGFRVKSSGDIRVLGSVEGAELYAEGSIEIKSGIVAQDKGCIVAGKDVRTSFIQNAN 279 Query: 277 VVAGEDVIVTQSVMHSNIKAGRDVLCNGAKGLIVGGIVQAGERVVARTIGNTMSTATAIE 336 V AG VIV+QS+M S ++AG+ ++C G+KG I+GG++QAGE++VAR GN+ +T T +E Sbjct: 280 VTAGNQVIVSQSIMFSTVRAGKQIICKGSKGFIIGGVLQAGEKIVARVFGNSSATPTILE 339 Query: 337 VGVVPELRNEINELRQELRHLLENEDKTNKALYLLNQ-LANNGQLSPDKVALRVKLNATK 395 VGV PELR E+ +++EL+++ EN KT++ L ++NQ L + +L DK +++KL T+ Sbjct: 340 VGVKPELRQELASIQKELQNVYENLRKTDQGLGVMNQILQVSKELPADKRLMQIKLTNTR 399 Query: 396 QSHMREEKKIKERVLEIERMLEDTGRARVEVIKTIYGGSKIVIGRYTRFVKDPTERVTFI 455 +E K+++ R +IE L+ G A +E +Y G K+ G+ F+K R FI Sbjct: 400 LVLEKESKELEARRNDIELELKGEGPAAIEAYHVMYPGIKMTFGKLVHFIKHEYARTRFI 459 Query: 456 YSDGDIT 462 DG+I+ Sbjct: 460 VLDGEIS 466 >A3DCQ6.1 A3DCQ6_CLOTH Putative uncharacterized protein Length = 542 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 159/459 (34%), Positives = 257/459 (55%), Gaps = 4/459 (0%) Query: 7 LSQYISINFSEDKGIAYLQFSKKDENFSCTVEDLESFLHSHNIRYGIQRDIVQRISSNPE 66 L I +N S DK A + D T +++ L + +RYGI +++ +S P Sbjct: 85 LDATIDVNISPDKMKATMVIRPPDGGRMLTKDEMMEILKNSGVRYGINESMLENVSKYP- 143 Query: 67 EYFFSRVPIAIGEPAVNGTDGRVVLTVDLEEDRKPLEKADGKVDYKDLVRLHNVLKGQII 126 + + IA G P +NG +G+V DL+++RKP DG+VD+++L + +V KGQ++ Sbjct: 144 -VYNEIIVIAEGTPPINGQNGKVEFHFDLKKERKPTILEDGRVDFRELNLIESVKKGQVL 202 Query: 127 AKIIPPEPGKSGTMVTGEELPFRPGKEAHFKVGKNVLVDQEETAMYAAIDGLVTLTDKGK 186 ++PP PG G V E+P GK A GKNV + ++ ++ A IDG V D GK Sbjct: 203 CTLVPPLPGTPGRTVEDIEVPALDGKPAVLPKGKNVEISEDGQSLIAGIDGQVNYID-GK 261 Query: 187 INVFPVYEVNGDVDYSTGNIDFVGTVVIRGNVLTGFTVKSAGDIRVVGGVEGAELXXXXX 246 ++VF YEV DVD STGNI FVG V+IRGNVL+GFTV++ G + V+G VE A + Sbjct: 262 VSVFANYEVPADVDNSTGNISFVGNVIIRGNVLSGFTVEAGGSVEVMGVVEAAVIKADGD 321 Query: 247 XXXXXXXXXYNKGLVSAGKNVKVSFIQDGNVVAGEDVIVTQSVMHSNIKAGRDVLCNGAK 306 +G++ +G ++ +I++ + A D I +++MHSN+K G + +G K Sbjct: 322 IILRRGMQGLGRGILKSGGDIIAKYIENSIIEAKGD-IKAEAIMHSNVKCGNKLELSGKK 380 Query: 307 GLIVGGIVQAGERVVARTIGNTMSTATAIEVGVVPELRNEINELRQELRHLLENEDKTNK 366 GL++GG + G+ +VA+ IG+ ++T T IEVGV P+++ ELR E+R + E+ K + Sbjct: 381 GLLIGGKCKVGKEIVAKVIGSYLATHTDIEVGVDPQIKERYKELRDEIRKIEEDLVKAEQ 440 Query: 367 ALYLLNQLANNGQLSPDKVALRVKLNATKQSHMREEKKIKERVLEIERMLEDTGRARVEV 426 A+ +L +L G+L+P+K L + TK + ++KE ++ E+ L+ ++ V Sbjct: 441 AITILKKLEAAGKLTPEKQELMARSIRTKIYYSNRLGELKEELIITEQRLQKEADGKIRV 500 Query: 427 IKTIYGGSKIVIGRYTRFVKDPTERVTFIYSDGDITMTP 465 IY G+K+ IG +VK+ + T DI + P Sbjct: 501 FDHIYPGTKVTIGTSMMYVKEDLQYCTLYRDGADIRVGP 539 >B4BHR1.1 B4BHR1_CLOTM Putative uncharacterized protein Length = 479 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 157/459 (34%), Positives = 256/459 (55%), Gaps = 4/459 (0%) Query: 7 LSQYISINFSEDKGIAYLQFSKKDENFSCTVEDLESFLHSHNIRYGIQRDIVQRISSNPE 66 L I +N S DK A + T +++ L + +RYGI +++ +S P Sbjct: 22 LDATIDVNISPDKMKATMVIRPPYGGRMLTKDEMMEILKNSGVRYGINESMLENVSKYP- 80 Query: 67 EYFFSRVPIAIGEPAVNGTDGRVVLTVDLEEDRKPLEKADGKVDYKDLVRLHNVLKGQII 126 + + IA G P ++G +G+V DL+++RKP DG+VD+++L + +V KGQ++ Sbjct: 81 -VYNEIIVIAEGTPPIDGQNGKVEFHFDLKKERKPTILEDGRVDFRELNLIESVKKGQVL 139 Query: 127 AKIIPPEPGKSGTMVTGEELPFRPGKEAHFKVGKNVLVDQEETAMYAAIDGLVTLTDKGK 186 ++PP PG G V E+P GK A GKNV + ++ ++ A IDG V D GK Sbjct: 140 CTLVPPLPGTPGRTVEDIEVPALDGKPAVLPKGKNVEISEDGQSLIAGIDGQVNYID-GK 198 Query: 187 INVFPVYEVNGDVDYSTGNIDFVGTVVIRGNVLTGFTVKSAGDIRVVGGVEGAELXXXXX 246 ++VF YEV DVD STGNI FVG V+IRGNVL+GFTV++ G + V+G VE A + Sbjct: 199 VSVFANYEVPADVDNSTGNISFVGNVIIRGNVLSGFTVEAGGSVEVMGVVEAAVIKADGD 258 Query: 247 XXXXXXXXXYNKGLVSAGKNVKVSFIQDGNVVAGEDVIVTQSVMHSNIKAGRDVLCNGAK 306 +G++ +G ++ +I++ + A D I +++MHSN+K G + +G K Sbjct: 259 IILRRGMQGLGRGILKSGGDIIAKYIENSIIEAKGD-IKAEAIMHSNVKCGNKLELSGKK 317 Query: 307 GLIVGGIVQAGERVVARTIGNTMSTATAIEVGVVPELRNEINELRQELRHLLENEDKTNK 366 GL++GG + G+ +VA+ IG+ ++T T IEVGV P+++ ELR E+R + E+ K + Sbjct: 318 GLLIGGKCKVGKEIVAKVIGSYLATHTDIEVGVDPQIKERYKELRDEIRKIEEDLVKAEQ 377 Query: 367 ALYLLNQLANNGQLSPDKVALRVKLNATKQSHMREEKKIKERVLEIERMLEDTGRARVEV 426 A+ +L +L G+L+P+K L + TK + ++KE ++ E+ L+ ++ V Sbjct: 378 AITILKKLEAAGKLTPEKQELMARSIRTKIYYSNRLGELKEELIITEQRLQKEADGKIRV 437 Query: 427 IKTIYGGSKIVIGRYTRFVKDPTERVTFIYSDGDITMTP 465 IY G+K+ IG +VK+ + T DI + P Sbjct: 438 FDHIYPGTKVTIGTSMMYVKEDLQYCTLYRDGADIRVGP 476 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.137 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,682,049,538 Number of extensions: 113826310 Number of successful extensions: 365495 Number of sequences better than 1.0e-05: 286 Number of HSP's gapped: 364746 Number of HSP's successfully gapped: 286 Length of query: 467 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 328 Effective length of database: 1,751,175,118 Effective search space: 574385438704 Effective search space used: 574385438704 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)