BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0586.0020.p
         (72 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIG2.1 B3KIG2_9BACI Membrane-associated zinc metalloprotease        103   5e-21
B1DM60.1 B1DM60_9BACL Membrane-associated zinc metalloprotease         96   9e-19
Q9KA70.1 RASP_BACHD Zinc metalloprotease rasP EC=3.4.24.-              95   2e-18
A8UCV8.1 A8UCV8_9LACT Zinc-dependent protease, membrane associat...    94   3e-18
Q8EQU7.1 RASP_OCEIH Zinc metalloprotease rasP EC=3.4.24.-              89   2e-16

>B3KIG2.1 B3KIG2_9BACI Membrane-associated zinc metalloprotease
          Length = 424

 Score =  103 bits (257), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/49 (95%), Positives = 49/49 (100%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HEWGHYYFA+RAGILVREFAIGFGPKLFSYKR+ETQFTLRLLPFGGYAR
Sbjct: 21 HEWGHYYFARRAGILVREFAIGFGPKLFSYKRHETQFTLRLLPFGGYAR 69


>B1DM60.1 B1DM60_9BACL Membrane-associated zinc metalloprotease
          Length = 421

 Score = 96.3 bits (238), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/49 (83%), Positives = 45/49 (91%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HEWGHY+FAKRAGILVREFAIGFGPKLFS KR ET+FTLRL+P GG+ R
Sbjct: 21 HEWGHYFFAKRAGILVREFAIGFGPKLFSIKRGETRFTLRLVPAGGFVR 69


>Q9KA70.1 RASP_BACHD Zinc metalloprotease rasP EC=3.4.24.-
          Length = 420

 Score = 95.1 bits (235), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/49 (81%), Positives = 44/49 (89%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HEWGH YFAKRAGIL REFAIGFGPKLFS+KRNET +T+RL+P GGY R
Sbjct: 18 HEWGHLYFAKRAGILCREFAIGFGPKLFSWKRNETVYTIRLIPLGGYVR 66


>A8UCV8.1 A8UCV8_9LACT Zinc-dependent protease, membrane associated
          (Putative)
          Length = 424

 Score = 94.4 bits (233), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 45/49 (91%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HE+GHYYFAK+AGILVREFAIGFGPK+FSY++ ET FT+R+LP GGY R
Sbjct: 19 HEFGHYYFAKKAGILVREFAIGFGPKIFSYRKGETTFTIRILPVGGYVR 67


>Q8EQU7.1 RASP_OCEIH Zinc metalloprotease rasP EC=3.4.24.-
          Length = 424

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/49 (73%), Positives = 43/49 (87%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HEWGH  FAKRAG+LVREFAIGFGPK+FS+ +NET +T+RL+P GGY R
Sbjct: 18 HEWGHLIFAKRAGMLVREFAIGFGPKIFSFTKNETLYTIRLIPAGGYVR 66


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.330    0.147    0.482 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 318,970,442
Number of extensions: 8277764
Number of successful extensions: 16925
Number of sequences better than 1.0e-05: 550
Number of HSP's gapped: 17151
Number of HSP's successfully gapped: 550
Length of query: 72
Length of database: 3,060,696,203
Length adjustment: 43
Effective length of query: 29
Effective length of database: 2,655,592,558
Effective search space: 77012184182
Effective search space used: 77012184182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 126 (53.1 bits)