BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0586.0012.p
         (102 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DM54.1 B1DM54_9BACL Putative uncharacterized protein                141   2e-32
B3KIG7.1 B3KIG7_9BACI Putative uncharacterized protein                133   5e-30
Q9KA75.1 Q9KA75_BACHD BH2415 protein                                  107   3e-22
C4ZBF6.1 C4ZBF6_9FIRM Putative uncharacterized protein                107   3e-22
A1HSB2.1 A1HSB2_9FIRM Putative uncharacterized protein                107   5e-22

>B1DM54.1 B1DM54_9BACL Putative uncharacterized protein
          Length = 104

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 84/102 (82%)

Query: 1   MKQRKVPMRKCVASQEMMPKKELIRVVRTPEGEVLIDLTGKKSGRGAYICGKLECFKLAQ 60
           M+ RKVP+RKCVA QEM PK+ELIRVVRTP  EVLIDLTGKK+GRGAY+CG++ CFKLA+
Sbjct: 1   MRPRKVPLRKCVACQEMKPKRELIRVVRTPNEEVLIDLTGKKAGRGAYLCGQVSCFKLAK 60

Query: 61  KNKALDRALKCQVSPEIYAQLARDFASVEEQFLAAKDSEDNE 102
           K+KALDRALK  V   IY QL +DF +VE++FLA K+   +E
Sbjct: 61  KSKALDRALKQAVDASIYDQLEQDFIAVEDEFLAGKERGSDE 102


>B3KIG7.1 B3KIG7_9BACI Putative uncharacterized protein
          Length = 86

 Score =  133 bits (335), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/81 (77%), Positives = 71/81 (87%)

Query: 18 MPKKELIRVVRTPEGEVLIDLTGKKSGRGAYICGKLECFKLAQKNKALDRALKCQVSPEI 77
          MPKKELIR+VRTP+  VLIDLTGKKSGRGAY+CGK+ CFKLA KNKALDRALK  V PEI
Sbjct: 1  MPKKELIRIVRTPDDAVLIDLTGKKSGRGAYLCGKVSCFKLAHKNKALDRALKQHVKPEI 60

Query: 78 YAQLARDFASVEEQFLAAKDS 98
          Y QLA+DF  VE++FLAAK+S
Sbjct: 61 YEQLAQDFIKVEDEFLAAKES 81


>Q9KA75.1 Q9KA75_BACHD BH2415 protein
          Length = 91

 Score =  107 bits (268), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 62/81 (76%)

Query: 1  MKQRKVPMRKCVASQEMMPKKELIRVVRTPEGEVLIDLTGKKSGRGAYICGKLECFKLAQ 60
          MKQRK+P+RKCV + EM PK+ELIRVVR+PEG V ID TGK++GRGAYI    ECF+LA+
Sbjct: 1  MKQRKIPLRKCVVTNEMKPKQELIRVVRSPEGNVFIDPTGKQNGRGAYISNNKECFELAK 60

Query: 61 KNKALDRALKCQVSPEIYAQL 81
          K   L + L  +VS ++Y QL
Sbjct: 61 KKDILSKHLNVKVSDDVYDQL 81


>C4ZBF6.1 C4ZBF6_9FIRM Putative uncharacterized protein
          Length = 90

 Score =  107 bits (267), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/89 (55%), Positives = 67/89 (75%)

Query: 1  MKQRKVPMRKCVASQEMMPKKELIRVVRTPEGEVLIDLTGKKSGRGAYICGKLECFKLAQ 60
          M  +K+PMRKCV  QEM  KK LIRVV+T EG++++D TGKK+GRGAYIC  LECFK A+
Sbjct: 1  MANKKIPMRKCVGCQEMKEKKSLIRVVKTAEGDIILDDTGKKNGRGAYICKSLECFKKAK 60

Query: 61 KNKALDRALKCQVSPEIYAQLARDFASVE 89
          K KAL+R+L   VS ++Y +L ++   ++
Sbjct: 61 KTKALERSLGVSVSEQVYEELEKEMNQID 89


>A1HSB2.1 A1HSB2_9FIRM Putative uncharacterized protein
          Length = 89

 Score =  107 bits (266), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 61/85 (71%)

Query: 1  MKQRKVPMRKCVASQEMMPKKELIRVVRTPEGEVLIDLTGKKSGRGAYICGKLECFKLAQ 60
          MKQ+KVP R CV  QEM  KKELIRVVRTP GEVLID TGKK+GRGAY+C   +CF  A 
Sbjct: 1  MKQKKVPQRVCVGCQEMKNKKELIRVVRTPTGEVLIDTTGKKAGRGAYLCNNEQCFTKAF 60

Query: 61 KNKALDRALKCQVSPEIYAQLARDF 85
          K K L+RALK  + P IY +L   F
Sbjct: 61 KEKRLERALKHSIEPPIYEELRARF 85


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.132    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 543,657,883
Number of extensions: 18608930
Number of successful extensions: 42413
Number of sequences better than 1.0e-05: 438
Number of HSP's gapped: 42459
Number of HSP's successfully gapped: 438
Length of query: 102
Length of database: 3,060,696,203
Length adjustment: 70
Effective length of query: 32
Effective length of database: 2,401,225,153
Effective search space: 76839204896
Effective search space used: 76839204896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)