BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0010.p (861 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIG9.1 B3KIG9_9BACI Translation initiation factor IF-2 1199 0.0 B1DM52.1 B1DM52_9BACL Translation initiation factor IF-2 1042 0.0 C0ZF51.1 C0ZF51_BREBN Translation initiation factor IF-2 847 0.0 C3J443.1 C3J443_9BACI Translation initiation factor IF-2 837 0.0 B7YA66.1 B7YA66_9BACI Translation initiation factor IF-2 837 0.0 >B3KIG9.1 B3KIG9_9BACI Translation initiation factor IF-2 Length = 893 Score = 1199 bits (3102), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/922 (69%), Positives = 699/922 (75%), Gaps = 93/922 (10%) Query: 4 LTKEDNKD-KLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMENGSVSKVEQFFKDI 62 ++K++NKD KLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMEN +VSKVEQFFKDI Sbjct: 1 MSKQENKDNKLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMENDTVSKVEQFFKDI 60 Query: 63 KSNAAAKRDSGTSSR-----PASAGTVTAEP----------------------------- 88 KSNAAAKRDSG + R P+ +G A Sbjct: 61 KSNAAAKRDSGDAPRTENRKPSGSGANAAASVSQAKTEGTSTNVNADGNRNGQDGMRHSG 120 Query: 89 -----QSAQNANKNQPEKQVGMXXXXXXXXXXXX--PRPQSGQDSRRATSGSTQNSRPHS 141 Q Q+ K Q EKQVGM RPQ GQD+RR SGS Q S+ ++ Sbjct: 121 QRVSGQQGQSQPKKQQEKQVGMNSRTNSNTQQASGSQRPQGGQDTRRNQSGSAQGSQQNN 180 Query: 142 STGGNRP--XXXXXXXXXXXXXXXXXPQGNSTGGSRPQGSSTG-SRPQGQGGGAPRTGDR 198 + G+RP PQGN+ GGSRPQG++ G +RPQG G P Sbjct: 181 RSQGSRPGGSTQTGSRPQGGGQGGGRPQGNNQGGSRPQGNNQGGTRPQG--GNNP----- 233 Query: 199 TQGQGGARTADSRPXXXXXXXXXXXXXXXPKKNTTGGRPNNNSGQ--------------K 244 GGAR S+P NN++GQ K Sbjct: 234 ----GGAR-PQSKPGGTGGGFSGS---------------NNSNGQNRGSRNNNNNRSDSK 273 Query: 245 RFEDXXXXXXXXXXXXXXX-----XXXXQPVERREKIDNTPKKIIVRGSMTVGETAKLLH 299 RF+D QP REKIDNTPKKIIVRG+MTVGETAKLLH Sbjct: 274 RFDDNRQGGFRGNNRGGKNNRGRNQHNQQPP--REKIDNTPKKIIVRGNMTVGETAKLLH 331 Query: 300 KDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEVEVKIPVDEDSFETVEENDSEE 359 KDASEVIKKLI +GVMATINQELDIDTILLL+ EFGVEVEVKIPV+ED FETVEEND+ E Sbjct: 332 KDASEVIKKLIFLGVMATINQELDIDTILLLAGEFGVEVEVKIPVEEDRFETVEENDAPE 391 Query: 360 DLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGGITQHIGAYQVEINHKKITFLDT 419 +L+ RPPVVTIMGHVDHGKTTLLDAIRSTNV+ GEAGGITQHIGAYQVEIN+KKITFLDT Sbjct: 392 ELKERPPVVTIMGHVDHGKTTLLDAIRSTNVSSGEAGGITQHIGAYQVEINNKKITFLDT 451 Query: 420 PGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINHAKAAGLPIIVAVNKIDKPGA 479 PGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINHAKAAGLPIIVAVNKIDKP A Sbjct: 452 PGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINHAKAAGLPIIVAVNKIDKPDA 511 Query: 480 DPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXXXXXXXXXVAEVNEYKANPDKRA 539 +PD+VKQELT YELVPEEWGGDTIFVN+SAKQR+ VAEVNEYKANPDKRA Sbjct: 512 NPDKVKQELTEYELVPEEWGGDTIFVNVSAKQRMGLEDLLEMILLVAEVNEYKANPDKRA 571 Query: 540 RGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCFGRVRAMVNDKGRKIKEAGPSTP 599 RGTVIEAELDK RGPVARILVQ+GTLKVGDAFVAGNCFGR+RAMVNDKGR++KEAGPSTP Sbjct: 572 RGTVIEAELDKGRGPVARILVQHGTLKVGDAFVAGNCFGRIRAMVNDKGRRLKEAGPSTP 631 Query: 600 VEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQSELNTNTRVTLDDLFKHIKEGE 659 VEITGLTEVP AGDPFM FEDERKAR IAD+R+ + RQSELNTNTRVTLDDLF+HIK+GE Sbjct: 632 VEITGLTEVPGAGDPFMVFEDERKARNIADKRAITHRQSELNTNTRVTLDDLFQHIKDGE 691 Query: 660 IKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHSGAGAITESDITLAAASNAIVIG 719 IKDLNVIIKGDVQGSVEALKGSL KIEVEGVRVKIIHSGAGAITESDI LAAASNAIVIG Sbjct: 692 IKDLNVIIKGDVQGSVEALKGSLNKIEVEGVRVKIIHSGAGAITESDIILAAASNAIVIG 751 Query: 720 FNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMKGMLDPVYKENIIGHAEVRNVFK 779 FNVRPD Q K AEQEKVD+RLH +IYNVIEEIE AMKGMLDP YKE++IGHAEVRN FK Sbjct: 752 FNVRPDVQAKQTAEQEKVDIRLHRVIYNVIEEIEQAMKGMLDPEYKESVIGHAEVRNTFK 811 Query: 780 ISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKIDTLKRFKDDAKEVAQGYECGITL 839 +SKVGTIAGCMVTSGKITRNAE RLIR GIVV +GKID+LKRFKDDAKEVAQGYECGITL Sbjct: 812 VSKVGTIAGCMVTSGKITRNAEARLIRDGIVVHEGKIDSLKRFKDDAKEVAQGYECGITL 871 Query: 840 ERYNDVVEGDIIEAFIMETVER 861 Y+DV EGD+IEAFIMETVER Sbjct: 872 VGYSDVKEGDVIEAFIMETVER 893 >B1DM52.1 B1DM52_9BACL Translation initiation factor IF-2 Length = 944 Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/685 (75%), Positives = 569/685 (83%), Gaps = 19/685 (2%) Query: 183 SRPQGQGGGAPRTGDRTQGQGGARTADSRPXXXXXXXXXXXXXXXPKKNTTG-GRPNNNS 241 +RPQGQGGG R+ D SRP N R NN Sbjct: 273 NRPQGQGGGQNRSFD-----------SSRPAPTSRGTAAGESNNRKGNNAVNKNRTNNTG 321 Query: 242 GQKRFED-----XXXXXXXXXXXXXXXXXXXQPVERREKIDNTPKKIIVRGSMTVGETAK 296 GQKRF+D QP REKIDNTPKKIIVRG+MTVG+ AK Sbjct: 322 GQKRFDDGKPNFRTNPNGRGRGGRNNRNHSQQP--PREKIDNTPKKIIVRGTMTVGDLAK 379 Query: 297 LLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEVEVKIPVDEDSFETVEEND 356 LLHKDASEVIKKLIS+GVMATINQELD+DTILL++ EFGVEVEVKIPV+ED+FETVEE D Sbjct: 380 LLHKDASEVIKKLISLGVMATINQELDMDTILLIAQEFGVEVEVKIPVEEDTFETVEEVD 439 Query: 357 SEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGGITQHIGAYQVEINHKKITF 416 E DL TRPPVVTIMGHVDHGKTTLLDAIR TNVTGGEAGGITQHIGAYQVEINHKKITF Sbjct: 440 DEADLTTRPPVVTIMGHVDHGKTTLLDAIRHTNVTGGEAGGITQHIGAYQVEINHKKITF 499 Query: 417 LDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINHAKAAGLPIIVAVNKIDK 476 LDTPGHEAFT MRARGAQVTD+TIIVVAADDGVMPQTVEA+NHAKAAG+PIIVAVNKIDK Sbjct: 500 LDTPGHEAFTLMRARGAQVTDITIIVVAADDGVMPQTVEAVNHAKAAGVPIIVAVNKIDK 559 Query: 477 PGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXXXXXXXXXVAEVNEYKANPD 536 P ADPD++KQ LT YELVPEEWGGDTIFVN+SAKQR+ VAEVN+YKAN D Sbjct: 560 PDADPDKIKQALTEYELVPEEWGGDTIFVNVSAKQRLGLEELLEMILLVAEVNDYKANAD 619 Query: 537 KRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCFGRVRAMVNDKGRKIKEAGP 596 KRARGTVIEAELDK +GPVAR+LVQ+G+LK+GDAFVAGNCFGRVRAMVNDKGR+IKEAGP Sbjct: 620 KRARGTVIEAELDKGKGPVARVLVQHGSLKIGDAFVAGNCFGRVRAMVNDKGRRIKEAGP 679 Query: 597 STPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQSELNTNTRVTLDDLFKHIK 656 STPVEITGLTEVP AGDPFM FEDERKARAIADRRS QRQSEL N+RVTLDDLFKHI+ Sbjct: 680 STPVEITGLTEVPLAGDPFMVFEDERKARAIADRRSIKQRQSELGANSRVTLDDLFKHIQ 739 Query: 657 EGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHSGAGAITESDITLAAASNAI 716 EGEIKDLN+IIK DVQGS EALKGSLAKIE+EGVR+KIIHSG GAITESDI LAAASNAI Sbjct: 740 EGEIKDLNIIIKSDVQGSTEALKGSLAKIEIEGVRIKIIHSGVGAITESDINLAAASNAI 799 Query: 717 VIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMKGMLDPVYKENIIGHAEVRN 776 VIGFNVRP+ Q AA+QEKVDVRLH +IYNVIEEIE AMKGMLDP++KE + G AEVRN Sbjct: 800 VIGFNVRPEPQADLAAQQEKVDVRLHRVIYNVIEEIEQAMKGMLDPIFKEVVQGQAEVRN 859 Query: 777 VFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKIDTLKRFKDDAKEVAQGYECG 836 +FK+SKVG IAGCMV SGKITRN+E+R+IRSGIVVF+GK+DT+KRFKDD KEVAQGYECG Sbjct: 860 IFKLSKVGAIAGCMVISGKITRNSEVRVIRSGIVVFEGKMDTVKRFKDDVKEVAQGYECG 919 Query: 837 ITLERYNDVVEGDIIEAFIMETVER 861 IT+ER++D EGDIIEAF+ME+VER Sbjct: 920 ITIERFSDFKEGDIIEAFVMESVER 944 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/95 (66%), Positives = 75/95 (78%), Gaps = 7/95 (7%) Query: 7 EDNKDKLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMENGSVSKVEQFFKDIKSNA 66 +DNKDK RVYEYAKSLNMSSKEIITILKRLN+PVNNHMSVMEN V KVE FF+DIK NA Sbjct: 9 KDNKDKTRVYEYAKSLNMSSKEIITILKRLNLPVNNHMSVMENEMVHKVEGFFRDIKQNA 68 Query: 67 AAKRDSGTSSRPASAGTVTAEPQSAQNANKNQPEK 101 AAKR ++ + + TV+A PQ Q A ++P++ Sbjct: 69 AAKR-----AQESGSATVSAAPQ--QQAQNSKPQQ 96 >C0ZF51.1 C0ZF51_BREBN Translation initiation factor IF-2 Length = 876 Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/582 (71%), Positives = 490/582 (84%) Query: 280 PKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEVE 339 P KI S+TV E A L K+ +EVIKKL ++G+MATINQ LD + I L+ +++G+EVE Sbjct: 295 PTKITFTESLTVNELAVKLRKEPAEVIKKLFNLGIMATINQYLDREAIELICADYGIEVE 354 Query: 340 VKIPVDEDSFETVEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGGIT 399 KI +DE +FET+EE D+ E L RPPVVTIMGHVDHGKTTLLDAIRSTNV GEAGGIT Sbjct: 355 EKIIIDETNFETLEEVDAPESLMERPPVVTIMGHVDHGKTTLLDAIRSTNVVAGEAGGIT 414 Query: 400 QHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINH 459 QHIGAYQVEI KKITFLDTPGH AFT MRARGAQ+TD+TI+VVAADDGVMPQTVEAI+H Sbjct: 415 QHIGAYQVEIKGKKITFLDTPGHAAFTTMRARGAQITDITILVVAADDGVMPQTVEAISH 474 Query: 460 AKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXXXX 519 AKAA +PIIVAVNKIDKP A+ DR+KQELT YELV EEWGG+TIF LSAKQR Sbjct: 475 AKAANVPIIVAVNKIDKPEANMDRIKQELTEYELVAEEWGGETIFSPLSAKQRTGIEELL 534 Query: 520 XXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCFGR 579 V+EV E KANPDKRARGTV+EAELDK RGPVA ILVQ GTL+VGD V G+ FGR Sbjct: 535 EYILLVSEVQELKANPDKRARGTVVEAELDKGRGPVATILVQQGTLRVGDPIVVGSAFGR 594 Query: 580 VRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQSE 639 VRAMVNDKGR++KEAGPSTPVEITGL +VPQAGD F FEDE+KARAI + R++ QR+SE Sbjct: 595 VRAMVNDKGRRLKEAGPSTPVEITGLNDVPQAGDQFRVFEDEKKARAIGEARASKQRESE 654 Query: 640 LNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHSGA 699 ++RV+LDDLF+HI+EG+IK+LN+I+KGDVQGSVEAL+GSL KI+V G RVKIIH+GA Sbjct: 655 RRESSRVSLDDLFQHIQEGDIKELNLIVKGDVQGSVEALRGSLEKIDVNGTRVKIIHTGA 714 Query: 700 GAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMKGM 759 GAITESD+TLA ASNAI+IGFNVRP+ ++ AEQEK+D+RLH +IY VIEEIESA+KGM Sbjct: 715 GAITESDVTLANASNAIIIGFNVRPEPNARSMAEQEKIDIRLHRVIYTVIEEIESALKGM 774 Query: 760 LDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKIDTL 819 LDPV+KENIIG AE+R VFK+SKVG IAGC VT GK++R+A RLIR GIV+++GK+DTL Sbjct: 775 LDPVFKENIIGQAEIREVFKVSKVGNIAGCYVTEGKLSRDAGARLIREGIVIYEGKLDTL 834 Query: 820 KRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 KRFKDDAK+VA GYECG+TLER+ND+ GD+IEAF+M V++ Sbjct: 835 KRFKDDAKDVAAGYECGLTLERFNDLKIGDVIEAFVMVEVKQ 876 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 31/142 (21%) Query: 12 KLRVYEYAKSLNMSSKEIITILKRLNVPVNNHMSVMENGSVSKVEQFFKDIKSNAAAKRD 71 K RVYEYAK NMSSKEI+ +LKRLN+ V NHMS+ME G++ ++E ++S A ++ Sbjct: 2 KTRVYEYAKQHNMSSKEILNLLKRLNIEVANHMSIMEEGTIKRIEDHMAKLRSGAKPEQ- 60 Query: 72 SGTSSRPASAGTVTAEPQSAQNANKNQPEKQVGMXXXXXXXXXXXXPRPQSGQDSRRATS 131 + P+ A E Q N ++ Q K P+ Q+GQ + Sbjct: 61 ---HNTPSDARPKQTEDQQRPNDSRGQLNK----------------PQQQAGQ------T 95 Query: 132 GSTQNSRPHSSTGG-----NRP 148 + +N RP+S GG NRP Sbjct: 96 QTVRNDRPNSDRGGSTSNINRP 117 >C3J443.1 C3J443_9BACI Translation initiation factor IF-2 Length = 739 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/582 (69%), Positives = 478/582 (82%) Query: 280 PKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEVE 339 PKKI GS+TV E AK L ++ SE+IKKL +GVMATINQ+LD D I L+ S++GVEVE Sbjct: 157 PKKITFEGSLTVAELAKKLGREPSEIIKKLFMLGVMATINQDLDKDAIELICSDYGVEVE 216 Query: 340 VKIPVDEDSFETVEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGGIT 399 K+ +DE +FE +E D+ EDL RPPVVTIMGHVDHGKTTLLDAIR + VT EAGGIT Sbjct: 217 EKVTIDETNFEAIEIVDAPEDLVERPPVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGIT 276 Query: 400 QHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINH 459 QHIGAYQV +N KKITFLDTPGHEAFT MRARGAQVTD+ I+VVAADDGVMPQTVEAINH Sbjct: 277 QHIGAYQVTVNDKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINH 336 Query: 460 AKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXXXX 519 AKAA +PIIVA+NKIDKP A+PDRV QEL Y LVPEEWGGDTIF LSAK + Sbjct: 337 AKAANVPIIVAINKIDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLL 396 Query: 520 XXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCFGR 579 V+E+ E KANP++RA GTVIEA+LDK RGPVA +L+Q GTL+VGD V G +GR Sbjct: 397 EMILLVSEMEELKANPNRRAVGTVIEAKLDKGRGPVATLLIQAGTLRVGDPIVVGTTYGR 456 Query: 580 VRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQSE 639 VRAMVND GR++KEA PS PVEITGL EVPQAGD FM FEDE+KAR IA+ R+ Q Q + Sbjct: 457 VRAMVNDSGRRVKEATPSMPVEITGLHEVPQAGDRFMVFEDEKKARQIAEARAQRQLQEQ 516 Query: 640 LNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHSGA 699 + TRV+LDDLF+ IK+GE+K+LN+I+K DVQGSVEAL +L KI+VEGVRVKIIH+ Sbjct: 517 RSVKTRVSLDDLFEQIKQGEMKELNLIVKADVQGSVEALVAALQKIDVEGVRVKIIHAAV 576 Query: 700 GAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMKGM 759 GAITESDI+LA ASNAIVIGFNVRPDA K AAE EKVD+RLH IIYNVIEEIE+AMKGM Sbjct: 577 GAITESDISLATASNAIVIGFNVRPDANAKRAAESEKVDIRLHRIIYNVIEEIEAAMKGM 636 Query: 760 LDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKIDTL 819 LDP Y+E +IG AEVR FK+SKVGTIAGC VT GKITR++++RLIR GIVV++G+ID+L Sbjct: 637 LDPEYEEKVIGQAEVRQTFKVSKVGTIAGCYVTDGKITRDSKVRLIRQGIVVYEGEIDSL 696 Query: 820 KRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 KR+KDD +EVAQGYECG+T++ +ND+ EGD+IEA+IM+ V R Sbjct: 697 KRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEAYIMQEVAR 738 >B7YA66.1 B7YA66_9BACI Translation initiation factor IF-2 Length = 739 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/582 (69%), Positives = 478/582 (82%) Query: 280 PKKIIVRGSMTVGETAKLLHKDASEVIKKLISMGVMATINQELDIDTILLLSSEFGVEVE 339 PKKI GS+TV E AK L ++ SE+IKKL +GVMATINQ+LD D I L+ S++GVEVE Sbjct: 157 PKKITFEGSLTVAELAKKLGREPSEIIKKLFMLGVMATINQDLDKDAIELICSDYGVEVE 216 Query: 340 VKIPVDEDSFETVEENDSEEDLQTRPPVVTIMGHVDHGKTTLLDAIRSTNVTGGEAGGIT 399 K+ +DE +FE +E D+ EDL RPPVVTIMGHVDHGKTTLLDAIR + VT EAGGIT Sbjct: 217 EKVTIDETNFEAIEIVDAPEDLVERPPVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGIT 276 Query: 400 QHIGAYQVEINHKKITFLDTPGHEAFTAMRARGAQVTDMTIIVVAADDGVMPQTVEAINH 459 QHIGAYQV +N KKITFLDTPGHEAFT MRARGAQVTD+ I+VVAADDGVMPQTVEAINH Sbjct: 277 QHIGAYQVTVNDKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINH 336 Query: 460 AKAAGLPIIVAVNKIDKPGADPDRVKQELTNYELVPEEWGGDTIFVNLSAKQRINXXXXX 519 AKAA +PIIVA+NKIDKP A+PDRV QEL Y LVPEEWGGDTIF LSAK + Sbjct: 337 AKAANVPIIVAINKIDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLL 396 Query: 520 XXXXXVAEVNEYKANPDKRARGTVIEAELDKNRGPVARILVQNGTLKVGDAFVAGNCFGR 579 V+E+ E KANP++RA GTVIEA+LDK RGPVA +L+Q GTL+VGD V G +GR Sbjct: 397 EMILLVSEMEELKANPNRRAVGTVIEAKLDKGRGPVATLLIQAGTLRVGDPIVVGTTYGR 456 Query: 580 VRAMVNDKGRKIKEAGPSTPVEITGLTEVPQAGDPFMAFEDERKARAIADRRSTSQRQSE 639 VRAMVND GR++KEA PS PVEITGL EVPQAGD FM FEDE+KAR IA+ R+ Q Q + Sbjct: 457 VRAMVNDSGRRVKEATPSMPVEITGLHEVPQAGDRFMVFEDEKKARQIAEARAQRQLQEQ 516 Query: 640 LNTNTRVTLDDLFKHIKEGEIKDLNVIIKGDVQGSVEALKGSLAKIEVEGVRVKIIHSGA 699 + TRV+LDDLF+ IK+GE+K+LN+I+K DVQGSVEAL +L KI+VEGVRVKIIH+ Sbjct: 517 RSVKTRVSLDDLFEQIKQGEMKELNLIVKADVQGSVEALVAALQKIDVEGVRVKIIHAAV 576 Query: 700 GAITESDITLAAASNAIVIGFNVRPDAQTKAAAEQEKVDVRLHNIIYNVIEEIESAMKGM 759 GAITESDI+LA ASNAIVIGFNVRPDA K AAE EKVD+RLH IIYNVIEEIE+AMKGM Sbjct: 577 GAITESDISLATASNAIVIGFNVRPDANAKRAAESEKVDIRLHRIIYNVIEEIEAAMKGM 636 Query: 760 LDPVYKENIIGHAEVRNVFKISKVGTIAGCMVTSGKITRNAEMRLIRSGIVVFQGKIDTL 819 LDP Y+E +IG AEVR FK+SKVGTIAGC VT GKITR++++RLIR GIVV++G+ID+L Sbjct: 637 LDPEYEEKVIGQAEVRQTFKVSKVGTIAGCYVTDGKITRDSKVRLIRQGIVVYEGEIDSL 696 Query: 820 KRFKDDAKEVAQGYECGITLERYNDVVEGDIIEAFIMETVER 861 KR+KDD +EVAQGYECG+T++ +ND+ EGD+IEA+IM+ V R Sbjct: 697 KRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEAYIMQEVAR 738 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,519,761,175 Number of extensions: 180848872 Number of successful extensions: 594013 Number of sequences better than 1.0e-05: 9575 Number of HSP's gapped: 582524 Number of HSP's successfully gapped: 9720 Length of query: 861 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 716 Effective length of database: 1,694,649,028 Effective search space: 1213368704048 Effective search space used: 1213368704048 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 136 (57.0 bits)