BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0004.p (700 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIH5.1 B3KIH5_9BACI Polyribonucleotide nucleotidyltransferase ... 1155 0.0 A7GRD7.1 PNP_BACCN Polyribonucleotide nucleotidyltransferase EC=... 948 0.0 C3BNN3.1 C3BNN3_9BACI Polyribonucleotide nucleotidyltransferase 941 0.0 C3B6P0.1 C3B6P0_BACMY Polyribonucleotide nucleotidyltransferase 941 0.0 C3APA5.1 C3APA5_BACMY Polyribonucleotide nucleotidyltransferase 941 0.0 >B3KIH5.1 B3KIH5_9BACI Polyribonucleotide nucleotidyltransferase EC=2.7.7.8 Length = 701 Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 573/697 (82%), Positives = 613/697 (87%) Query: 1 MEKRVEMQLGGRRLVLETGRLAKQANAAVMVRYGDTSVLCTVTASSEPKDLDFFPLTVNY 60 ME RVEMQLGGR LV ETGRLAKQANAAVMVRYG+T+VLCTVTASSEPKDLDFFPLTVNY Sbjct: 1 METRVEMQLGGRPLVFETGRLAKQANAAVMVRYGETAVLCTVTASSEPKDLDFFPLTVNY 60 Query: 61 EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD 120 EERLYAVGKIPGGFIKREGRPSEKAIL+SRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD Sbjct: 61 EERLYAVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD 120 Query: 121 CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGGFVINPDVAQQAVSDIYVVVAGTK 180 C P+IAAMIGTSAALSISDVPF+GPIGGVAVGR++G FV+NP++A+Q SDIY+VVAGTK Sbjct: 121 CEPEIAAMIGTSAALSISDVPFNGPIGGVAVGRVDGNFVVNPNIAEQEASDIYLVVAGTK 180 Query: 181 DAIMMVEAEANEVPEDVMLEAIMFGHDEIRKXXXXXXXXXXXXGKEKMAVKLHTVNSEVN 240 DAIMMVEAEANEVPE+VMLEAIMFGH+EI+K GKEKMAVKLH VN VN Sbjct: 181 DAIMMVEAEANEVPEEVMLEAIMFGHEEIKKIVAKIEELVAACGKEKMAVKLHAVNETVN 240 Query: 241 AEVRAYAQIRLVEAVKIAEKHARQDAIDLINNETVEYFAEKYIETPELLKDVKEVLHDIV 300 EVR +A+ RLVEAV+I EKHARQDAID IN+E F EKYIETPELLKDVKEVLHDIV Sbjct: 241 REVREFAEARLVEAVRIEEKHARQDAIDAINDEAYTVFEEKYIETPELLKDVKEVLHDIV 300 Query: 301 KDEVRRLITHDKIRPDGRKLDEIRPIECDTALLPRTHGSGLFTRGQTQILSVCTLGALGD 360 K+EVRRLITHDK+RPDGR L EIRPI+CDT+LLPRTHGSGLFTRGQTQ LSVCTLGALGD Sbjct: 301 KEEVRRLITHDKVRPDGRGLSEIRPIDCDTSLLPRTHGSGLFTRGQTQALSVCTLGALGD 360 Query: 361 VQILDGIDPAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF 420 VQILDGID ETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIP+E +F Sbjct: 361 VQILDGIDLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPNEVDF 420 Query: 421 PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI 480 PYTIRLVSE IESNGSTSQASICAS LAMMDAGVPIKAPVAGVAMGLIKDG+HVSILTDI Sbjct: 421 PYTIRLVSEVIESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGDHVSILTDI 480 Query: 481 QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRKILQDALQQAKEGRMFILGKMMEAI 540 QGMEDHLGDMDFKVAGT +GVTAIQMDIKI GIDR ILQ+ALQQAKEGRM ILGKM EAI Sbjct: 481 QGMEDHLGDMDFKVAGTPDGVTAIQMDIKIDGIDRAILQEALQQAKEGRMHILGKMAEAI 540 Query: 541 SEPRPSLSKYAXXXXXXXXXXXXXXXVXXXXXXXXXXXXEETGVKIDIEQDGRVFIGSSD 600 +PR +LS+YA V EETGVKIDIEQDGRVFI SS+ Sbjct: 541 QKPRETLSQYAPKIITMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN 600 Query: 601 EAMIQKARGIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK 660 + M +KA IIEGIVREV VGEIY GTV+RIEKFGAFVE++P KDGLVHISQLSTERVAK Sbjct: 601 DEMNKKALSIIEGIVREVAVGEIYTGTVKRIEKFGAFVEILPNKDGLVHISQLSTERVAK 660 Query: 661 VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTSEGA 697 VEDVVAIGD ITVKVTEIDQQGR+NLSRKAVLT+E + Sbjct: 661 VEDVVAIGDVITVKVTEIDQQGRINLSRKAVLTTEAS 697 >A7GRD7.1 PNP_BACCN Polyribonucleotide nucleotidyltransferase EC=2.7.7.8 Length = 710 Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/695 (67%), Positives = 556/695 (80%), Gaps = 2/695 (0%) Query: 2 EKRV-EMQLGGRRLVLETGRLAKQANAAVMVRYGDTSVLCTVTASSEPKDLDFFPLTVNY 60 EK+V + L GR+L +ETG+LAKQAN AV+VRYGDT+VL T TAS E KD+DFFPLTVNY Sbjct: 4 EKQVFSIDLAGRQLTIETGQLAKQANGAVLVRYGDTAVLSTATASKEAKDVDFFPLTVNY 63 Query: 61 EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD 120 EERLYAVGKIPGGFIKREGRPSEKAIL+SRL DRPIRPLF +GFRN+VQV+++VMSVDQD Sbjct: 64 EERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSVDQD 123 Query: 121 CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGGFVINPDVAQQAVSDIYVVVAGTK 180 C+ ++AAM+G+S ALSISD+PF+GPI G VGRI+G F+INP V QQ SDI++VVAGTK Sbjct: 124 CSSEMAAMLGSSLALSISDIPFEGPIAGATVGRIDGEFIINPTVEQQEKSDIHLVVAGTK 183 Query: 181 DAIMMVEAEANEVPEDVMLEAIMFGHDEIRKXXXXXXXXXXXXGKEKMAVKLHTVNSEVN 240 DAI MVEA A++VPE+ MLEAIMFGH+EI++ GKEKM VKL+ V++E+ Sbjct: 184 DAINMVEAGADQVPEETMLEAIMFGHEEIKRLIAFQEEIVQAVGKEKMEVKLYEVDAELE 243 Query: 241 AEVRAYAQIRLVEAVKIAEKHARQDAIDLINNETVEYFAEKYIETPELLKDVKEVLHDIV 300 VR A+ + A+++ EKHAR+DAI+ + + ++ E+ +E E+L V E+L+ IV Sbjct: 244 KAVREMAEKDMHTAIQVHEKHAREDAINEVKQRVIAHYEEQEVEA-EVLGQVSEILYKIV 302 Query: 301 KDEVRRLITHDKIRPDGRKLDEIRPIECDTALLPRTHGSGLFTRGQTQILSVCTLGALGD 360 K+EVRRLIT +KIRPDGRK DEIRP+ + +LPRTHGSGLFTRGQTQ LS+CTLGALGD Sbjct: 303 KEEVRRLITVEKIRPDGRKSDEIRPLASEVGILPRTHGSGLFTRGQTQALSICTLGALGD 362 Query: 361 VQILDGIDPAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF 420 VQILDG+ E+KRFMHHYNFP FSVGE RP+R PGRREIGHGALGERAL VIPSE +F Sbjct: 363 VQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEKDF 422 Query: 421 PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI 480 PYT+RLVSE +ESNGSTSQASIC S LAMMDAGVP+KAPVAG+AMGL+K GEH +ILTDI Sbjct: 423 PYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHYTILTDI 482 Query: 481 QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRKILQDALQQAKEGRMFILGKMMEAI 540 QGMEDHLGDMDFKVAGTA+GVTA+QMDIKI G+ R+IL++ALQQAK GRM IL M+ I Sbjct: 483 QGMEDHLGDMDFKVAGTAKGVTALQMDIKIDGLSREILEEALQQAKVGRMHILDHMLSVI 542 Query: 541 SEPRPSLSKYAXXXXXXXXXXXXXXXVXXXXXXXXXXXXEETGVKIDIEQDGRVFIGSSD 600 +EPR LS+YA V EETGVKIDIEQDG VFI S D Sbjct: 543 AEPRKELSEYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISSID 602 Query: 601 EAMIQKARGIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK 660 + M +KA+ IIE IVREVQVGEIY+G V+RIEKFGAFVEL GKDGLVHIS+L+ ERV K Sbjct: 603 QQMNEKAKKIIEDIVREVQVGEIYLGKVKRIEKFGAFVELFSGKDGLVHISELALERVGK 662 Query: 661 VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVLTSE 695 VEDVV IGD I+VKV EID+QGRVNLSRK +L E Sbjct: 663 VEDVVKIGDEISVKVIEIDKQGRVNLSRKVLLKEE 697 >C3BNN3.1 C3BNN3_9BACI Polyribonucleotide nucleotidyltransferase Length = 717 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/692 (67%), Positives = 553/692 (79%), Gaps = 2/692 (0%) Query: 2 EKRV-EMQLGGRRLVLETGRLAKQANAAVMVRYGDTSVLCTVTASSEPKDLDFFPLTVNY 60 EK+V + L GR+L +ETG+LAKQAN AV+VRYGDT+VL T TAS EPK++DFFPLTVNY Sbjct: 4 EKQVFSIDLAGRQLTIETGQLAKQANGAVLVRYGDTAVLSTATASKEPKNVDFFPLTVNY 63 Query: 61 EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD 120 EERLYAVGKIPGGFIKREGRPSEKAIL+SRL DRPIRPLF +GFRN+VQV+++VMSVDQD Sbjct: 64 EERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSVDQD 123 Query: 121 CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGGFVINPDVAQQAVSDIYVVVAGTK 180 C+ ++AAM+G+S ALSISDVPF+GPI G VGRI+G F+INP V QQ SDI++VVAGTK Sbjct: 124 CSSEMAAMLGSSLALSISDVPFEGPIAGATVGRIDGEFIINPTVEQQEKSDIHLVVAGTK 183 Query: 181 DAIMMVEAEANEVPEDVMLEAIMFGHDEIRKXXXXXXXXXXXXGKEKMAVKLHTVNSEVN 240 DAI MVEA A++VPE++MLEAIMFGHDEI++ GKEK VKL+ V++ +N Sbjct: 184 DAINMVEAGADQVPEEIMLEAIMFGHDEIKRLVAFQEEIVQAVGKEKTEVKLYEVDATIN 243 Query: 241 AEVRAYAQIRLVEAVKIAEKHARQDAIDLINNETVEYFAEKYIETPELLKDVKEVLHDIV 300 +VR A+ + A+++ EKHAR+DAI+ + +E++ E E L V E+L+ IV Sbjct: 244 QDVREMAEKDMHAAIQVHEKHAREDAINEVKKRVIEHY-EANEADGETLGQVNEILYKIV 302 Query: 301 KDEVRRLITHDKIRPDGRKLDEIRPIECDTALLPRTHGSGLFTRGQTQILSVCTLGALGD 360 K+EVRRLIT +KIRPDGRK DEIRP+ + +L RTHGSGLFTRGQTQ LS+CTLGALGD Sbjct: 303 KEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGALGD 362 Query: 361 VQILDGIDPAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF 420 VQILDG+ E+KRFMHHYNFP FSVGE RP+R PGRREIGHGALGERAL VIPSE +F Sbjct: 363 VQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEQDF 422 Query: 421 PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI 480 PYT+RLVSE +ESNGSTSQASIC S LAMMDAGVP+KAPVAG+AMGL+K GEH +ILTDI Sbjct: 423 PYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHYTILTDI 482 Query: 481 QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRKILQDALQQAKEGRMFILGKMMEAI 540 QGMEDHLGDMDFKVAGTA+GVTA+QMDIKIAG+ R+IL++ALQQAK GRM IL M+ AI Sbjct: 483 QGMEDHLGDMDFKVAGTAQGVTALQMDIKIAGLSREILEEALQQAKVGRMHILDHMLSAI 542 Query: 541 SEPRPSLSKYAXXXXXXXXXXXXXXXVXXXXXXXXXXXXEETGVKIDIEQDGRVFIGSSD 600 +EPR LS YA V EETGVKIDIEQDG VFI S D Sbjct: 543 AEPRKELSAYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISSID 602 Query: 601 EAMIQKARGIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK 660 + M +KA+ IIE IVREVQVGEIY+G V+R+EKFGAFV L GKDGLVHIS+L+ ERV K Sbjct: 603 QEMNEKAKKIIEDIVREVQVGEIYLGKVKRVEKFGAFVGLFSGKDGLVHISELALERVGK 662 Query: 661 VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVL 692 VEDVV IGD I+VKV EID+QGRVNLSRK +L Sbjct: 663 VEDVVKIGDEISVKVIEIDKQGRVNLSRKVLL 694 >C3B6P0.1 C3B6P0_BACMY Polyribonucleotide nucleotidyltransferase Length = 717 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/692 (67%), Positives = 553/692 (79%), Gaps = 2/692 (0%) Query: 2 EKRV-EMQLGGRRLVLETGRLAKQANAAVMVRYGDTSVLCTVTASSEPKDLDFFPLTVNY 60 EK+V + L GR+L +ETG+LAKQAN AV+VRYGDT+VL T TAS EPK++DFFPLTVNY Sbjct: 4 EKQVFSIDLAGRQLTIETGQLAKQANGAVLVRYGDTAVLSTATASKEPKNVDFFPLTVNY 63 Query: 61 EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD 120 EERLYAVGKIPGGFIKREGRPSEKAIL+SRL DRPIRPLF +GFRN+VQV+++VMSVDQD Sbjct: 64 EERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSVDQD 123 Query: 121 CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGGFVINPDVAQQAVSDIYVVVAGTK 180 C+ ++AAM+G+S ALSISDVPF+GPI G VGRI+G F+INP V QQ SDI++VVAGTK Sbjct: 124 CSSEMAAMLGSSLALSISDVPFEGPIAGATVGRIDGEFIINPTVEQQEKSDIHLVVAGTK 183 Query: 181 DAIMMVEAEANEVPEDVMLEAIMFGHDEIRKXXXXXXXXXXXXGKEKMAVKLHTVNSEVN 240 DAI MVEA A++VPE++MLEAIMFGHDEI++ GKEK VKL+ V++ +N Sbjct: 184 DAINMVEAGADQVPEEIMLEAIMFGHDEIKRLVAFQEEIVQAVGKEKTEVKLYEVDATIN 243 Query: 241 AEVRAYAQIRLVEAVKIAEKHARQDAIDLINNETVEYFAEKYIETPELLKDVKEVLHDIV 300 +VR A+ + A+++ EKHAR+DAI+ + +E++ E E L V E+L+ IV Sbjct: 244 QDVREMAEKDMHAAIQVHEKHAREDAINEVKKRVIEHY-EANEADGETLGQVNEILYKIV 302 Query: 301 KDEVRRLITHDKIRPDGRKLDEIRPIECDTALLPRTHGSGLFTRGQTQILSVCTLGALGD 360 K+EVRRLIT +KIRPDGRK DEIRP+ + +L RTHGSGLFTRGQTQ LS+CTLGALGD Sbjct: 303 KEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGALGD 362 Query: 361 VQILDGIDPAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF 420 VQILDG+ E+KRFMHHYNFP FSVGE RP+R PGRREIGHGALGERAL VIPSE +F Sbjct: 363 VQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEQDF 422 Query: 421 PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI 480 PYT+RLVSE +ESNGSTSQASIC S LAMMDAGVP+KAPVAG+AMGL+K GEH +ILTDI Sbjct: 423 PYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHYTILTDI 482 Query: 481 QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRKILQDALQQAKEGRMFILGKMMEAI 540 QGMEDHLGDMDFKVAGTA+GVTA+QMDIKIAG+ R+IL++ALQQAK GRM IL M+ AI Sbjct: 483 QGMEDHLGDMDFKVAGTAQGVTALQMDIKIAGLSREILEEALQQAKVGRMHILDHMLSAI 542 Query: 541 SEPRPSLSKYAXXXXXXXXXXXXXXXVXXXXXXXXXXXXEETGVKIDIEQDGRVFIGSSD 600 +EPR LS YA V EETGVKIDIEQDG VFI S D Sbjct: 543 AEPRKELSAYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISSID 602 Query: 601 EAMIQKARGIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK 660 + M +KA+ IIE IVREVQVGEIY+G V+R+EKFGAFV L GKDGLVHIS+L+ ERV K Sbjct: 603 QEMNEKAKKIIEDIVREVQVGEIYLGKVKRVEKFGAFVGLFSGKDGLVHISELALERVGK 662 Query: 661 VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVL 692 VEDVV IGD I+VKV EID+QGRVNLSRK +L Sbjct: 663 VEDVVKIGDEISVKVIEIDKQGRVNLSRKVLL 694 >C3APA5.1 C3APA5_BACMY Polyribonucleotide nucleotidyltransferase Length = 717 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/692 (67%), Positives = 553/692 (79%), Gaps = 2/692 (0%) Query: 2 EKRV-EMQLGGRRLVLETGRLAKQANAAVMVRYGDTSVLCTVTASSEPKDLDFFPLTVNY 60 EK+V + L GR+L +ETG+LAKQAN AV+VRYGDT+VL T TAS EPK++DFFPLTVNY Sbjct: 4 EKQVFSIDLAGRQLTIETGQLAKQANGAVLVRYGDTAVLSTATASKEPKNVDFFPLTVNY 63 Query: 61 EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNLVMSVDQD 120 EERLYAVGKIPGGFIKREGRPSEKAIL+SRL DRPIRPLF +GFRN+VQV+++VMSVDQD Sbjct: 64 EERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSVDQD 123 Query: 121 CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGGFVINPDVAQQAVSDIYVVVAGTK 180 C+ ++AAM+G+S ALSISDVPF+GPI G VGRI+G F+INP V QQ SDI++VVAGTK Sbjct: 124 CSSEMAAMLGSSLALSISDVPFEGPIAGATVGRIDGEFIINPTVEQQEKSDIHLVVAGTK 183 Query: 181 DAIMMVEAEANEVPEDVMLEAIMFGHDEIRKXXXXXXXXXXXXGKEKMAVKLHTVNSEVN 240 DAI MVEA A++VPE++MLEAIMFGHDEI++ GKEK VKL+ V++ +N Sbjct: 184 DAINMVEAGADQVPEEIMLEAIMFGHDEIKRLVAFQEEIVQAVGKEKTEVKLYEVDATIN 243 Query: 241 AEVRAYAQIRLVEAVKIAEKHARQDAIDLINNETVEYFAEKYIETPELLKDVKEVLHDIV 300 +VR A+ + A+++ EKHAR+DAI+ + +E++ E E L V E+L+ IV Sbjct: 244 QDVREMAEKDMHAAIQVHEKHAREDAINEVKKRVIEHY-EANEADGETLGQVNEILYKIV 302 Query: 301 KDEVRRLITHDKIRPDGRKLDEIRPIECDTALLPRTHGSGLFTRGQTQILSVCTLGALGD 360 K+EVRRLIT +KIRPDGRK DEIRP+ + +L RTHGSGLFTRGQTQ LS+CTLGALGD Sbjct: 303 KEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGALGD 362 Query: 361 VQILDGIDPAETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF 420 VQILDG+ E+KRFMHHYNFP FSVGE RP+R PGRREIGHGALGERAL VIPSE +F Sbjct: 363 VQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEQDF 422 Query: 421 PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGEHVSILTDI 480 PYT+RLVSE +ESNGSTSQASIC S LAMMDAGVP+KAPVAG+AMGL+K GEH +ILTDI Sbjct: 423 PYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHYTILTDI 482 Query: 481 QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRKILQDALQQAKEGRMFILGKMMEAI 540 QGMEDHLGDMDFKVAGTA+GVTA+QMDIKIAG+ R+IL++ALQQAK GRM IL M+ AI Sbjct: 483 QGMEDHLGDMDFKVAGTAQGVTALQMDIKIAGLSREILEEALQQAKVGRMHILDHMLSAI 542 Query: 541 SEPRPSLSKYAXXXXXXXXXXXXXXXVXXXXXXXXXXXXEETGVKIDIEQDGRVFIGSSD 600 +EPR LS YA V EETGVKIDIEQDG VFI S D Sbjct: 543 AEPRKELSAYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISSID 602 Query: 601 EAMIQKARGIIEGIVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK 660 + M +KA+ IIE IVREVQVGEIY+G V+R+EKFGAFV L GKDGLVHIS+L+ ERV K Sbjct: 603 QEMNEKAKKIIEDIVREVQVGEIYLGKVKRVEKFGAFVGLFSGKDGLVHISELALERVGK 662 Query: 661 VEDVVAIGDTITVKVTEIDQQGRVNLSRKAVL 692 VEDVV IGD I+VKV EID+QGRVNLSRK +L Sbjct: 663 VEDVVKIGDEISVKVIEIDKQGRVNLSRKVLL 694 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,606,575,786 Number of extensions: 144573174 Number of successful extensions: 426583 Number of sequences better than 1.0e-05: 3319 Number of HSP's gapped: 419409 Number of HSP's successfully gapped: 3846 Length of query: 700 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 557 Effective length of database: 1,713,491,058 Effective search space: 954414519306 Effective search space used: 954414519306 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)