BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0002.p (410 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIH7.1 B3KIH7_9BACI Peptidase M16 domain protein 628 e-178 C0ZF41.1 C0ZF41_BREBN Probable zinc protease EC=3.4.99.- 471 e-131 Q65JH3.1 Q65JH3_BACLD Peptidase 452 e-125 A9VT42.1 A9VT42_BACWK Peptidase M16 domain protein 450 e-124 B4BIZ1.1 B4BIZ1_9BACI Peptidase M16 domain protein 449 e-124 >B3KIH7.1 B3KIH7_9BACI Peptidase M16 domain protein Length = 422 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 298/410 (72%), Positives = 343/410 (83%) Query: 1 VVTEKIPTGRSVSFGIWVKTGSRNETPQNNGISHFIEHMLFKGTDRYSAKDIAEQFDAIG 60 VV E+IPT RSVSFGIWVKTGSRNE+ NGI+HFIEHM+FKGT+R+ A+ IAE+FDAIG Sbjct: 12 VVMEQIPTSRSVSFGIWVKTGSRNESEDINGITHFIEHMMFKGTERFDARAIAEEFDAIG 71 Query: 61 GNVNAFTSKEYTCYYAKVLDEHLPIAVDVLADMFFRSRMDAEELAKEKNVILEEIAMCED 120 GNVNAFTSKEYTCYYAKVLDEH PIAVDVL+DMFF S++D ELAKEKNVILEEIAM ED Sbjct: 72 GNVNAFTSKEYTCYYAKVLDEHFPIAVDVLSDMFFNSKLDPGELAKEKNVILEEIAMYED 131 Query: 121 TPDDLVHDLMCAAAYGEHPLAYSILGLKERLQEMTPDDLRDYMKAQYTIENTVISVAGNI 180 TPDDLVHDLM + YG+HPLAY ILG KERL+ M LR YM YTIENTVI++AGNI Sbjct: 132 TPDDLVHDLMSLSVYGDHPLAYPILGTKERLESMDSQALRSYMDRHYTIENTVIALAGNI 191 Query: 181 NDGLEELLEKHFGSFQNHGESAALAAPDFHGGLLFHRKKTEQNHICLSLPGVQSGGPLQY 240 ND + LLE+HFG F NHG S LA P F G+ F +KKTEQNHIC+S PG G LQY Sbjct: 192 NDEVIALLERHFGGFANHGTSEPLAVPAFLDGVQFRKKKTEQNHICMSFPGCSIGDELQY 251 Query: 241 PMVLLNNAIGGGMSSRMFQEIREKRGLAYSVYSYHSSQADSGLFTVYAGTAPKQTKEVTE 300 MVLLNNAIGGGMSSR+FQEIREKRGLAYSVYSYHSS AD+G+FT+YAGTAPKQTKEV + Sbjct: 252 AMVLLNNAIGGGMSSRLFQEIREKRGLAYSVYSYHSSHADNGMFTIYAGTAPKQTKEVLQ 311 Query: 301 LIKEMMHELAVKGLSDDELRKGKEQLKGSLILSLESTSSRMNRIGKNELMLGRHDTLDDM 360 L EM+H+LA G++++ELRKGKEQLKGSLILSLESTSSRMNR+GKNELMLGRH +LD++ Sbjct: 312 LTTEMLHDLAQNGMTEEELRKGKEQLKGSLILSLESTSSRMNRLGKNELMLGRHFSLDEI 371 Query: 361 IAKIQQVSMDDVNQLLDHMFAQPLAVAMVGATDKAIANVRRDDLVLLRSN 410 I +I+QV M DVN +LD MF P A+AMVG +DKA+ +RR++ V LRSN Sbjct: 372 IKRIEQVDMKDVNAVLDRMFGTPYALAMVGTSDKALNVLRRNEFVALRSN 421 >C0ZF41.1 C0ZF41_BREBN Probable zinc protease EC=3.4.99.- Length = 417 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 236/405 (58%), Positives = 304/405 (75%) Query: 1 VVTEKIPTGRSVSFGIWVKTGSRNETPQNNGISHFIEHMLFKGTDRYSAKDIAEQFDAIG 60 +VTE+IP+ RSV+ GIWV TGS+ E +NNGISHF+EHM FKGT SAK+IAE FD IG Sbjct: 13 IVTERIPSVRSVALGIWVGTGSKYENEKNNGISHFLEHMFFKGTKTRSAKEIAETFDEIG 72 Query: 61 GNVNAFTSKEYTCYYAKVLDEHLPIAVDVLADMFFRSRMDAEELAKEKNVILEEIAMCED 120 GNVNAFTSKEYTCYYA+VLD+H PIA+DVL+DM+F S DA+EL KEKNV++EEI+M ED Sbjct: 73 GNVNAFTSKEYTCYYARVLDQHAPIALDVLSDMYFNSVFDADELEKEKNVVIEEISMYED 132 Query: 121 TPDDLVHDLMCAAAYGEHPLAYSILGLKERLQEMTPDDLRDYMKAQYTIENTVISVAGNI 180 TPDDLVHDL+ A+Y HPL YSILG ++ L+ + DDL Y+ Y NTVI+VAGN Sbjct: 133 TPDDLVHDLIARASYSTHPLGYSILGTEDVLRSLKRDDLLAYIDQHYLPTNTVITVAGNF 192 Query: 181 NDGLEELLEKHFGSFQNHGESAALAAPDFHGGLLFHRKKTEQNHICLSLPGVQSGGPLQY 240 D L E ++K F +F G L+ PDF G ++ H K TEQ H+CLSLPG + G P Y Sbjct: 193 EDSLIEDIQKRFQAFSRSGIMPTLSTPDFAGNVIAHHKATEQAHLCLSLPGFKVGHPEVY 252 Query: 241 PMVLLNNAIGGGMSSRMFQEIREKRGLAYSVYSYHSSQADSGLFTVYAGTAPKQTKEVTE 300 ++LLNN +GG MSSR+FQEIRE+RGLAYSVYSYHSS ++G F VY GTAP+Q +V + Sbjct: 253 SLILLNNVLGGSMSSRLFQEIREERGLAYSVYSYHSSYKEAGTFHVYTGTAPEQVGQVFD 312 Query: 301 LIKEMMHELAVKGLSDDELRKGKEQLKGSLILSLESTSSRMNRIGKNELMLGRHDTLDDM 360 ++ ++ ++A G++D EL KGKEQLKGSL+LSLEST+SRM+R+GKNEL+LGRH +LD++ Sbjct: 313 IVSRVLRDVADHGITDKELNKGKEQLKGSLMLSLESTNSRMSRLGKNELLLGRHLSLDEI 372 Query: 361 IAKIQQVSMDDVNQLLDHMFAQPLAVAMVGATDKAIANVRRDDLV 405 IAKI +VS + V + +F +++AMV D NV+ D L+ Sbjct: 373 IAKIDRVSHESVLAVAQQLFRSKMSMAMVSPLDGFPENVKNDILL 417 >Q65JH3.1 Q65JH3_BACLD Peptidase Length = 409 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 212/392 (54%), Positives = 281/392 (71%) Query: 1 VVTEKIPTGRSVSFGIWVKTGSRNETPQNNGISHFIEHMLFKGTDRYSAKDIAEQFDAIG 60 +V E PT RSV+ G+W+ TGSR+ETP+ NGISHF+EHM FKGT +A+DIAE FD IG Sbjct: 13 IVFENNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTKTRTARDIAESFDRIG 72 Query: 61 GNVNAFTSKEYTCYYAKVLDEHLPIAVDVLADMFFRSRMDAEELAKEKNVILEEIAMCED 120 G VNAFTSKEYTCYYAKVLDEH A++VL+DMFF S D EEL KEKNV+ EEI M ED Sbjct: 73 GQVNAFTSKEYTCYYAKVLDEHASYALEVLSDMFFHSSFDEEELKKEKNVVYEEIKMYED 132 Query: 121 TPDDLVHDLMCAAAYGEHPLAYSILGLKERLQEMTPDDLRDYMKAQYTIENTVISVAGNI 180 TPDD+VHDL+ A+YG H L Y ILG +E L E D LR YM YT + VIS+AGN+ Sbjct: 133 TPDDIVHDLLSKASYGSHSLGYPILGTEETLAEFDGDSLRKYMNEYYTPDRVVISIAGNV 192 Query: 181 NDGLEELLEKHFGSFQNHGESAALAAPDFHGGLLFHRKKTEQNHICLSLPGVQSGGPLQY 240 + + EKHFGS++ G+ + PDFH + +K+TEQ H+CL G+++G P Y Sbjct: 193 PETFIKEAEKHFGSYEAKGKRTGMTKPDFHHEKMTRKKETEQAHLCLGFNGLEAGHPEIY 252 Query: 241 PMVLLNNAIGGGMSSRMFQEIREKRGLAYSVYSYHSSQADSGLFTVYAGTAPKQTKEVTE 300 +++LNN +GG MSSR+FQ++RE +GLAYSV+SYH+S DSG+ T+YAGT Q + ++E Sbjct: 253 DLIVLNNILGGSMSSRLFQDVREDKGLAYSVFSYHTSYEDSGMMTIYAGTGANQLQLLSE 312 Query: 301 LIKEMMHELAVKGLSDDELRKGKEQLKGSLILSLESTSSRMNRIGKNELMLGRHDTLDDM 360 I E + L G++ EL KEQ+KGSL+LSLEST+S+M+R GKNEL+LG+H TLD++ Sbjct: 313 TIHETLRALKSDGITPKELENSKEQMKGSLMLSLESTNSKMSRNGKNELLLGKHRTLDEI 372 Query: 361 IAKIQQVSMDDVNQLLDHMFAQPLAVAMVGAT 392 I K+ VS++ VN L + +F + A++ + Sbjct: 373 IEKLNAVSLERVNNLANRIFTDDYSSALISPS 404 >A9VT42.1 A9VT42_BACWK Peptidase M16 domain protein Length = 413 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 210/394 (53%), Positives = 282/394 (71%) Query: 1 VVTEKIPTGRSVSFGIWVKTGSRNETPQNNGISHFIEHMLFKGTDRYSAKDIAEQFDAIG 60 +V E IPT RSV+ GIW+ GSRNE +NNG+SHF+EHM FKGT+ SA++IAE FD+IG Sbjct: 13 IVMENIPTVRSVAIGIWIHAGSRNENEKNNGVSHFLEHMFFKGTETRSAREIAESFDSIG 72 Query: 61 GNVNAFTSKEYTCYYAKVLDEHLPIAVDVLADMFFRSRMDAEELAKEKNVILEEIAMCED 120 G VNAFTSKEYTCYYAKVLDEH A+DVLADMFF S D EEL KEKNV+ EEI M ED Sbjct: 73 GQVNAFTSKEYTCYYAKVLDEHAKYALDVLADMFFNSTFDEEELKKEKNVVCEEIKMYED 132 Query: 121 TPDDLVHDLMCAAAYGEHPLAYSILGLKERLQEMTPDDLRDYMKAQYTIENTVISVAGNI 180 PDD+VHD++ A Y HPL Y ILG +E L+ T D LR YMK YT EN V+S+AGNI Sbjct: 133 APDDIVHDMLTKATYETHPLGYPILGTEETLETFTGDTLRQYMKDHYTPENVVVSIAGNI 192 Query: 181 NDGLEELLEKHFGSFQNHGESAALAAPDFHGGLLFHRKKTEQNHICLSLPGVQSGGPLQY 240 ++ + +E++FGS++ + +P FH + +K+TEQ H+CL G+Q G Y Sbjct: 193 DEAFLQTVEQYFGSYEGTTNREQVHSPIFHFNKVARKKETEQAHLCLGYKGLQMGHEDIY 252 Query: 241 PMVLLNNAIGGGMSSRMFQEIREKRGLAYSVYSYHSSQADSGLFTVYAGTAPKQTKEVTE 300 +++LNN +GG MSSR+FQE+RE+RGLAYSV+SYHSS D+G+ T+Y GT KQ + E Sbjct: 253 NLIVLNNVLGGSMSSRLFQEVREQRGLAYSVFSYHSSYEDTGMLTLYGGTGSKQLDTLYE 312 Query: 301 LIKEMMHELAVKGLSDDELRKGKEQLKGSLILSLESTSSRMNRIGKNELMLGRHDTLDDM 360 ++E ++ L G+++ EL KEQLKG+L+LSLEST+SRM+R GKNEL+L +H +LD++ Sbjct: 313 TMQETLNTLKNTGITEKELVNSKEQLKGNLMLSLESTNSRMSRNGKNELLLRKHRSLDEI 372 Query: 361 IAKIQQVSMDDVNQLLDHMFAQPLAVAMVGATDK 394 I + V+ +V++L+ +MF + A++ K Sbjct: 373 IESVNTVTKQNVDELIRNMFTDEFSAALISPDGK 406 >B4BIZ1.1 B4BIZ1_9BACI Peptidase M16 domain protein Length = 413 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 214/389 (55%), Positives = 283/389 (72%) Query: 1 VVTEKIPTGRSVSFGIWVKTGSRNETPQNNGISHFIEHMLFKGTDRYSAKDIAEQFDAIG 60 +V E+IPT RSV+ G+W+ TGSRNET QNNGISHF+EHM FKGT +A+DIAE FD+IG Sbjct: 13 IVLEQIPTVRSVAIGVWIGTGSRNETEQNNGISHFLEHMFFKGTTTRTARDIAEAFDSIG 72 Query: 61 GNVNAFTSKEYTCYYAKVLDEHLPIAVDVLADMFFRSRMDAEELAKEKNVILEEIAMCED 120 G VNAFTSKEYTCYYAKVLDEH P+A+++LADMFF S +EL KE+NV+LEEI M ED Sbjct: 73 GQVNAFTSKEYTCYYAKVLDEHAPLALEMLADMFFHSTFVEDELQKERNVVLEEIKMYED 132 Query: 121 TPDDLVHDLMCAAAYGEHPLAYSILGLKERLQEMTPDDLRDYMKAQYTIENTVISVAGNI 180 TPDD+VHDL+ A Y HPL Y ILG +E L+ T D LR YM YT + V+SVAGN+ Sbjct: 133 TPDDIVHDLLGKACYANHPLGYPILGTEETLRTFTGDTLRQYMADYYTPDRVVVSVAGNV 192 Query: 181 NDGLEELLEKHFGSFQNHGESAALAAPDFHGGLLFHRKKTEQNHICLSLPGVQSGGPLQY 240 ++ +E++FGSF + A+ P F L +K TEQ H+C+ G+ G P Y Sbjct: 193 DERFIGEIERYFGSFTAANKPASPGKPSFVPQKLARKKDTEQAHVCIGFNGLPIGHPDAY 252 Query: 241 PMVLLNNAIGGGMSSRMFQEIREKRGLAYSVYSYHSSQADSGLFTVYAGTAPKQTKEVTE 300 P+++LNN +GG MSSR+FQE+RE+RGLAYSV+SYHS+ DSGL +YAGT Q + E Sbjct: 253 PLLILNNILGGSMSSRLFQEVREQRGLAYSVFSYHSAYQDSGLLAIYAGTGSGQLDILFE 312 Query: 301 LIKEMMHELAVKGLSDDELRKGKEQLKGSLILSLESTSSRMNRIGKNELMLGRHDTLDDM 360 I+ + L G+++ EL KEQ+KGSL+L LEST+SRM+R GKNEL+LGRH +LD++ Sbjct: 313 TIQRTLCHLKEDGITEKELHNSKEQMKGSLMLGLESTNSRMSRNGKNELLLGRHRSLDEI 372 Query: 361 IAKIQQVSMDDVNQLLDHMFAQPLAVAMV 389 I +I+ V+++ VN+L +FA+ A+A++ Sbjct: 373 IEEIESVTVEKVNELARTVFAEDYALALI 401 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,397,592,121 Number of extensions: 100668757 Number of successful extensions: 287445 Number of sequences better than 1.0e-05: 3579 Number of HSP's gapped: 283370 Number of HSP's successfully gapped: 3818 Length of query: 410 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 272 Effective length of database: 1,760,596,133 Effective search space: 478882148176 Effective search space used: 478882148176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)