BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0063.p (187 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B7U9C9.1 B7U9C9_9BACL Beta-1,4-endo-glucanase EC=3.2.1.4 225 2e-57 B1D718.1 B1D718_9BACL Cellulose 1,4-beta-cellobiosidase EC=3.2.1.91 204 4e-51 B3K8D7.1 B3K8D7_9BACI Glycoside hydrolase family 9 179 9e-44 Q9AJS0.1 Q9AJS0_ALIAC Cellulase EC=3.2.1.4 146 7e-34 C1PR31.1 C1PR31_ALIAC Glycosyl hydrolase family 9 146 7e-34 >B7U9C9.1 B7U9C9_9BACL Beta-1,4-endo-glucanase EC=3.2.1.4 Length = 542 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 107/186 (57%), Positives = 132/186 (70%) Query: 1 MGGYGTLAYLLSGESAAQTALYASLKQGLLAEADRLVRLSRDDGYRISLREEDYIWGSXX 60 MGGYGT+ YLL+ + ALYA LK LL EADRL+++ + DGY ISL+EEDYIWGS Sbjct: 354 MGGYGTIRYLLADKQEKDAALYAELKSHLLNEADRLLQIVKQDGYGISLKEEDYIWGSNM 413 Query: 61 XXXXXXXXXXXXEHFSGNIAYADCALDHLHYLMGRNVLDISYVTGFGDRPVMHPHHRPSV 120 GN+ Y AL H+HY++G NVLD+SYVTGFG+ VMHPHHRPSV Sbjct: 414 VVMNRAMLLLLAHKLCGNVEYEQAALGHVHYILGLNVLDLSYVTGFGEYSVMHPHHRPSV 473 Query: 121 GDGVADPVPGMVSGGPDRGLHDEYVALHLQGKPAAQCFADHDLSYSTNEVTIYWNSPAVF 180 GDGV PVPGM++GGP++ L+DE + HLQGKPAA C+ D SY+ NE+TIYWNSPAVF Sbjct: 474 GDGVEAPVPGMLAGGPNKYLNDECMRTHLQGKPAAACYIDDKDSYAGNEITIYWNSPAVF 533 Query: 181 VTARFN 186 V + +N Sbjct: 534 VFSHWN 539 >B1D718.1 B1D718_9BACL Cellulose 1,4-beta-cellobiosidase EC=3.2.1.91 Length = 539 Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 103/185 (55%), Positives = 124/185 (67%), Gaps = 1/185 (0%) Query: 1 MGGYGTLAYLLSGESAAQTALYASLKQGLLAEADRLVRLSRDDGYRISLREEDYIWGSXX 60 MGGYGT++YLLS E A+ L+ GLL A+RL +SR DG+ +SL+ E Y WGS Sbjct: 355 MGGYGTISYLLS-ERRGDLAVTERLRAGLLERAERLADVSRKDGFGVSLQPEQYKWGSNM 413 Query: 61 XXXXXXXXXXXXEHFSGNIAYADCALDHLHYLMGRNVLDISYVTGFGDRPVMHPHHRPSV 120 + +G + YAD AL+H+HYL G NV+ ISYVTGFG R V HPHHRPS Sbjct: 414 LVLNHAMLLLIADRVAGTVTYADLALNHIHYLFGMNVMGISYVTGFGSRSVKHPHHRPSE 473 Query: 121 GDGVADPVPGMVSGGPDRGLHDEYVALHLQGKPAAQCFADHDLSYSTNEVTIYWNSPAVF 180 GDGV DPVPG+VSGGP+ G+ D+Y HL G+ A FAD SYSTNEVTIYWNSPAVF Sbjct: 474 GDGVDDPVPGLVSGGPNLGIQDDYAREHLAGRAPAASFADVMESYSTNEVTIYWNSPAVF 533 Query: 181 VTARF 185 V + F Sbjct: 534 VLSHF 538 >B3K8D7.1 B3K8D7_9BACI Glycoside hydrolase family 9 Length = 307 Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 94/185 (50%), Positives = 114/185 (61%), Gaps = 1/185 (0%) Query: 1 MGGYGTLAYLLSGESAAQTALYASLKQGLLAEADRLVRLSRDDGYRISLREEDYIWGSXX 60 MGGYGT AYL+S E + L L GLL A L +S DGY +SL + YIWGS Sbjct: 123 MGGYGTFAYLMS-EQEEEPELAQELMAGLLRRAGELAAVSDRDGYGLSLLPDQYIWGSNM 181 Query: 61 XXXXXXXXXXXXEHFSGNIAYADCALDHLHYLMGRNVLDISYVTGFGDRPVMHPHHRPSV 120 SG+ + +H+HY+ G NV+ SYVTG+G RP+ HPHHRPS Sbjct: 182 LVMNHAMLLLVAGRLSGSEDFERHVHEHVHYVFGANVMGTSYVTGYGARPIRHPHHRPSE 241 Query: 121 GDGVADPVPGMVSGGPDRGLHDEYVALHLQGKPAAQCFADHDLSYSTNEVTIYWNSPAVF 180 GD V +PVPG+VSGGP++GLHD+Y HL G+ A FAD SYSTNEV IYWNSPAVF Sbjct: 242 GDDVEEPVPGLVSGGPNKGLHDDYAREHLAGRAPAASFADVMESYSTNEVAIYWNSPAVF 301 Query: 181 VTARF 185 V + F Sbjct: 302 VLSHF 306 >Q9AJS0.1 Q9AJS0_ALIAC Cellulase EC=3.2.1.4 Length = 537 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Query: 4 YGTLAYLLSGESAAQTALYASLKQGLLAEADRLVRLSRDDGYRISLREEDYIWGSXXXXX 63 YG + YL + +A + +K LL E D L ++ + I +R++D+IWGS Sbjct: 349 YGVMDYLRTPRAAVSDDVRNKVKSRLLRELDALAAMAESHPFGIPMRDDDFIWGSNMVLL 408 Query: 64 XXXXXXXXXEHFSG-NIAYADCALDHLHYLMGRNVLDISYVTGFGDRPVMHPHHRPSVGD 122 E + A A YL G N L YVTGFG RPV HPHHRPSV D Sbjct: 409 NRAMAFLLAEGVGVLHPAAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVAD 468 Query: 123 GVADPVPGMVSGGPDRGLHDEYVALHLQGKPAAQCFADHDLSYSTNEVTIYWNSPAVFVT 182 V PVPGMV GGP+R L DE L G+PA + + DH SYSTNEV +YWNSPAVFV Sbjct: 469 DVDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVI 528 Query: 183 A 183 A Sbjct: 529 A 529 >C1PR31.1 C1PR31_ALIAC Glycosyl hydrolase family 9 Length = 537 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 81/181 (44%), Positives = 99/181 (54%), Gaps = 1/181 (0%) Query: 4 YGTLAYLLSGESAAQTALYASLKQGLLAEADRLVRLSRDDGYRISLREEDYIWGSXXXXX 63 YG + YL + +A + +K LL E D L ++ + I +R++D+IWGS Sbjct: 349 YGVMDYLRTPRAAVSDDVRNKVKSRLLRELDALAAMAESHPFGIPMRDDDFIWGSNMVLL 408 Query: 64 XXXXXXXXXEHFSG-NIAYADCALDHLHYLMGRNVLDISYVTGFGDRPVMHPHHRPSVGD 122 E + A A YL G N L YVTGFG RPV HPHHRPSV D Sbjct: 409 NRAMAFLLAEGVGVLHPAAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVAD 468 Query: 123 GVADPVPGMVSGGPDRGLHDEYVALHLQGKPAAQCFADHDLSYSTNEVTIYWNSPAVFVT 182 V PVPGMV GGP+R L DE L G+PA + + DH SYSTNEV +YWNSPAVFV Sbjct: 469 DVDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVI 528 Query: 183 A 183 A Sbjct: 529 A 529 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,140,376,834 Number of extensions: 47125687 Number of successful extensions: 95531 Number of sequences better than 1.0e-05: 121 Number of HSP's gapped: 95377 Number of HSP's successfully gapped: 121 Length of query: 187 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 59 Effective length of database: 1,854,806,283 Effective search space: 109433570697 Effective search space used: 109433570697 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)