BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0584.0057.p
         (50 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DAK8.1 B1DAK8_9BACL Putative uncharacterized protein                 57   6e-07
B3K5P8.1 B3K5P8_9BACI Putative uncharacterized protein                 54   6e-06

>B1DAK8.1 B1DAK8_9BACL Putative uncharacterized protein
          Length = 154

 Score = 56.6 bits (135), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 1   VGIKPIGNRIVPIRLSFRFIDDREQAMKQLTRWAEENRVKLTYKRFVKWM 50
           +GIKP G RIVP+R+ FR++D+ ++    +  WA+ N VK+ Y  F +W+
Sbjct: 105 IGIKPHGARIVPVRMCFRYVDEEDKGFADIADWAKRNNVKVDYGFFFRWI 154


>B3K5P8.1 B3K5P8_9BACI Putative uncharacterized protein
          Length = 153

 Score = 53.5 bits (127), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 1   VGIKPIGNRIVPIRLSFRFIDDREQAMKQLTRWAEENRVKLTYKRFVKWM 50
           +GIKP G RIVP++L F F +D+ + ++QL  WA E  VK++   F++W+
Sbjct: 104 IGIKPKGRRIVPLKLCFTFTEDQVEGIRQLEIWASERHVKVSKGFFMRWL 153


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.329    0.141    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 282,253,452
Number of extensions: 7075201
Number of successful extensions: 22133
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 22133
Number of HSP's successfully gapped: 2
Length of query: 50
Length of database: 3,060,696,203
Length adjustment: 23
Effective length of query: 27
Effective length of database: 2,844,012,858
Effective search space: 76788347166
Effective search space used: 76788347166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 126 (53.1 bits)