BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0584.0056.p
         (100 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KBS9.1 B3KBS9_9BACI Stress responsive alpha-beta barrel domain...    93   9e-18
B7JUI3.1 B7JUI3_CYAP8 Stress responsive alpha-beta barrel domain...    70   4e-11
B4BZV0.1 B4BZV0_9CHRO Stress responsive alpha-beta barrel domain...    70   4e-11
A0YXQ9.1 A0YXQ9_9CYAN Putative uncharacterized protein                 70   8e-11
C2I0R8.1 C2I0R8_VIBCH Putative uncharacterized protein                 67   6e-10

>B3KBS9.1 B3KBS9_9BACI Stress responsive alpha-beta barrel domain protein
          Length = 100

 Score = 92.8 bits (229), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 63/98 (64%)

Query: 1  MYEHLVVFRFNEQYKPGNGEQLVQTLLALKDSIPGIVELTAGVNETEETENIHGYTLGLR 60
          M+EH+V+ +F         E  ++     K +IPGIVEL+AG+N TEE E++ G+TLG+R
Sbjct: 1  MFEHIVLLKFKPDVSIEVKESAIERAHDFKGNIPGIVELSAGINVTEELEHMQGFTLGIR 60

Query: 61 VTFSDQEALRKYGPHPAHQHFVGLLEGIIENVVVVDYP 98
          VTF DQ+A R Y  HP HQ  +  +   +E +VV+DYP
Sbjct: 61 VTFEDQQACRDYIQHPLHQSLLQSIGPFVEGIVVMDYP 98


>B7JUI3.1 B7JUI3_CYAP8 Stress responsive alpha-beta barrel domain protein
          Length = 97

 Score = 70.5 bits (171), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 4/100 (4%)

Query: 1  MYEHLVVFRFNEQYKPGNGEQLVQTLLALKDSIPGIVELTAGVNETEETENIHGYTLGLR 60
          M  H+V+F++ E       E +V++L ALKD IP I+E++ G N +E  +   G+  GL 
Sbjct: 1  MIVHIVLFKWQEGTSSETLESVVKSLEALKDKIPEILEISCGQNFSERAK---GFEHGLM 57

Query: 61 VTFSDQEALRKYGPHPAHQHFV-GLLEGIIENVVVVDYPV 99
          V FSD+ AL  Y  HPAH   V  L+  I+ +++ +DY +
Sbjct: 58 VKFSDRTALTTYASHPAHLEVVNNLIRPILVDIIALDYEI 97


>B4BZV0.1 B4BZV0_9CHRO Stress responsive alpha-beta barrel domain protein
          Length = 97

 Score = 70.5 bits (171), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 4/100 (4%)

Query: 1  MYEHLVVFRFNEQYKPGNGEQLVQTLLALKDSIPGIVELTAGVNETEETENIHGYTLGLR 60
          M  H+V+F++ E       E +V++L ALKD IP I+E++ G N +E  +   G+  GL 
Sbjct: 1  MIVHIVLFKWQEGTSSETLESVVKSLEALKDKIPEILEISCGQNFSERAK---GFEHGLM 57

Query: 61 VTFSDQEALRKYGPHPAHQHFV-GLLEGIIENVVVVDYPV 99
          V FSD+ AL  Y  HPAH   V  L+  I+ +++ +DY +
Sbjct: 58 VKFSDRTALTTYASHPAHLEVVNNLIRPILVDIIALDYEI 97


>A0YXQ9.1 A0YXQ9_9CYAN Putative uncharacterized protein
          Length = 97

 Score = 69.7 bits (169), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 4/100 (4%)

Query: 1  MYEHLVVFRFNEQYKPGNGEQLVQTLLALKDSIPGIVELTAGVNETEETENIHGYTLGLR 60
          M  H+V+F++ E+  P      ++ L  LK  IPGI++L+ G N +E ++   G+  GL 
Sbjct: 1  MIVHIVLFKWTEEATPEAIAGALEGLGQLKAKIPGIIDLSCGTNFSERSQ---GFQHGLV 57

Query: 61 VTFSDQEALRKYGPHPAHQHFV-GLLEGIIENVVVVDYPV 99
          V F+D+ AL  Y PHP HQ  V  L++ I+  ++ VDY V
Sbjct: 58 VKFTDKTALEAYTPHPDHQAVVQNLIKPILAEILAVDYEV 97


>C2I0R8.1 C2I0R8_VIBCH Putative uncharacterized protein
          Length = 104

 Score = 66.6 bits (161), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 1  MYEHLVVFRFNEQYKPGNGEQLVQTLLALKDSIPGIVELTAGVNETEETENIHGYTLGLR 60
          M  H+++ +F    KP + E+L     ++ D + G++ +  G N++ E +N  GY+  + 
Sbjct: 1  MIRHILLIKFRPSAKPSDIEKLKNLFASMPDKVDGVLSVEWGENDSPEGKN-QGYSHSVL 59

Query: 61 VTFSDQEALRKYGPHPAHQHFVGLLEGIIENVVVVDYPV 99
          +TFSD++  + Y PHP H+    +   ++E++VV DY +
Sbjct: 60 MTFSDEKGRQNYLPHPEHEALKKVFRPLLEDIVVFDYTI 98


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.140    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 631,716,268
Number of extensions: 22795033
Number of successful extensions: 50730
Number of sequences better than 1.0e-05: 47
Number of HSP's gapped: 50785
Number of HSP's successfully gapped: 47
Length of query: 100
Length of database: 3,060,696,203
Length adjustment: 69
Effective length of query: 31
Effective length of database: 2,410,646,168
Effective search space: 74730031208
Effective search space used: 74730031208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)