BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0050.p (290 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZKH4.1 C0ZKH4_BREBN Putative uncharacterized protein 233 2e-59 Q5ZV13.1 Q5ZV13_LEGPH Zn-dependent hydrolase GumP 228 3e-58 Q5X4S6.1 Q5X4S6_LEGPA Putative uncharacterized protein 225 3e-57 Q6HGK3.1 Q6HGK3_BACHK Putative uncharacterized protein 224 6e-57 Q638Z3.1 Q638Z3_BACCZ Putative uncharacterized protein 224 7e-57 >C0ZKH4.1 C0ZKH4_BREBN Putative uncharacterized protein Length = 283 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 122/269 (45%), Positives = 162/269 (60%), Gaps = 3/269 (1%) Query: 13 VSVSILSAGYCLHPELLTLKGGTIKPVAFPAGYALLRHPQHGPILFDTGYSSRFFEETAK 72 V ++++ GYC E+ + KGG +K + F A L+ HP HG +LFDTGYS RFFE T+K Sbjct: 3 VKLTLMDTGYCQQLEMFSRKGGRMKNIPFHAIAGLIEHPVHGLLLFDTGYSQRFFEATSK 62 Query: 73 LPASLYRHITPVVFKEGESAVERLREAGIAPEEIRYMVLSHFHADHIGGVRDFPKAQFIY 132 LP SLY +TPV K ES E+ GI +I +++SHFHADHIGG+RDFP A+ Sbjct: 63 LPYSLYGKLTPVFSKAHESIAEQHAARGIQTTDIAGILISHFHADHIGGLRDFPHARLYC 122 Query: 133 LRKSYEAVHRLGPIKALRAGFLPGLLPEDFTARSLPVDEYSPQRPLPPGF-PFTEAYDLL 191 +Y V ALR +LP L+P+DF R +D LP + P+TE YDL Sbjct: 123 FESAYNHVKGKTGWAALREAYLPDLMPDDFEERVTFIDR-GELVALPEAYAPYTEGYDLF 181 Query: 192 GDGSLLAVEMSGHAAGMIGLFVSG-DGYDYLLCADTVWSSRAFRENRRPHPAAGLIMSDR 250 D SL V+++GHA G G+F+ D D LCAD WSS A+R N PHP A LIM+DR Sbjct: 182 ADQSLYIVDLNGHAIGQFGVFLRDRDHGDVFLCADAAWSSEAYRGNLLPHPLAMLIMADR 241 Query: 251 KEYRHNFDRLRVIHENFPGLRIVPSHCRE 279 + YR + RL V+ P ++I+P+HC E Sbjct: 242 QAYREHLHRLHVLSRQRPDMKIMPTHCGE 270 >Q5ZV13.1 Q5ZV13_LEGPH Zn-dependent hydrolase GumP Length = 278 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 118/276 (42%), Positives = 163/276 (59%), Gaps = 11/276 (3%) Query: 7 MITSTPVSVSILSAGYCLHPELLTLKGGTIKPVAFPAGYALLRHPQHGPILFDTGYSSRF 66 M+ + + AGYC H E +TLK G I+ +P+ AL++HP HG ILFDTGYS RF Sbjct: 1 MVLFMHIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCALIKHPSHGYILFDTGYSDRF 60 Query: 67 FEETAKLPASLYRHITPVVFKEGESAVERLREAGIAPEEIRYMVLSHFHADHIGGVRDFP 126 T K PAS+YRH+TP+ + S E+L E I PE+I Y+V+SHFHADHIGG+ DFP Sbjct: 61 TCLTQKFPASIYRHLTPMTLVK--SLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFP 118 Query: 127 KAQFIYLRKSYEAVHRLGPIKALRAGFLPGLLPEDFTARSLPVDEYSPQRPLPPG---FP 183 A FI + + + +KAL GFLPGL+PEDF R LP+ Q+ + P Sbjct: 119 NAHFICHSDAIDDIQHTKGLKALLKGFLPGLIPEDFFERLLPL-----QKTIQLDEHLLP 173 Query: 184 FTEAYDLLGDGSLLAVEMSGHAAGMIGLFVSGDGYDYLLCADTVWSSRAFRENRRPHPAA 243 F++ +D+LGD SL+A+ + GHA G IGL+ G D L AD+ W F+E P Sbjct: 174 FSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPG-DIFLVADSCWHQETFKELIYPSALT 232 Query: 244 GLIMSDRKEYRHNFDRLRVIHENFPGLRIVPSHCRE 279 LI D++ Y +L +H+ + I+PSHC++ Sbjct: 233 YLIHHDKRAYLKTIQKLHELHQRNKTIEIIPSHCQQ 268 >Q5X4S6.1 Q5X4S6_LEGPA Putative uncharacterized protein Length = 278 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 162/276 (58%), Gaps = 11/276 (3%) Query: 7 MITSTPVSVSILSAGYCLHPELLTLKGGTIKPVAFPAGYALLRHPQHGPILFDTGYSSRF 66 M+ + + AGYC H E +TLK G I+ +P+ L++HP HG ILFDTGYS RF Sbjct: 1 MVLFMNIEYQLFEAGYCKHCERMTLKNGKIRQREYPSFCTLIKHPIHGYILFDTGYSDRF 60 Query: 67 FEETAKLPASLYRHITPVVFKEGESAVERLREAGIAPEEIRYMVLSHFHADHIGGVRDFP 126 T K PAS+YRH+TP+ + S E+L E I PE+I Y+V+SHFHADHIGG+ DFP Sbjct: 61 TCLTQKFPASIYRHLTPMTLVK--SLKEQLLEIHIKPEDINYIVISHFHADHIGGLCDFP 118 Query: 127 KAQFIYLRKSYEAVHRLGPIKALRAGFLPGLLPEDFTARSLPVDEYSPQRPLPPG---FP 183 A FI + + + +KAL GFLPGLLPEDF R LP+ Q+ + P Sbjct: 119 NAHFICHSDAIDDIQHTKGLKALLKGFLPGLLPEDFFERLLPL-----QKTIQLDEHLLP 173 Query: 184 FTEAYDLLGDGSLLAVEMSGHAAGMIGLFVSGDGYDYLLCADTVWSSRAFRENRRPHPAA 243 F++ +D+LGD SL+A+ + GHA G IGL+ G D L AD+ W F+E P Sbjct: 174 FSDGFDVLGDNSLIAIPLPGHAKGQIGLYFKAPG-DIFLVADSCWHQETFKELIYPSALT 232 Query: 244 GLIMSDRKEYRHNFDRLRVIHENFPGLRIVPSHCRE 279 LI D++ Y +L +++ + I+PSHC++ Sbjct: 233 YLIHHDKRAYLKTIQKLHELYQRNKTIEIIPSHCQQ 268 >Q6HGK3.1 Q6HGK3_BACHK Putative uncharacterized protein Length = 282 Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 116/278 (41%), Positives = 157/278 (56%), Gaps = 3/278 (1%) Query: 14 SVSILSAGYCLHPELLTLKGGTIKPVAFPAGYALLRHPQHGPILFDTGYSSRFFEETAKL 73 S+ + GYC HPE + G+ K + FPA LL HP+ G ILFDTGY+ F E T K Sbjct: 5 SLKLYDTGYCTHPEKIAYSKGSWKQICFPATVGLLHHPELGYILFDTGYAGYFKEATKKF 64 Query: 74 PASLYRHITPVVFKEGESAVERLREAGIAPEEIRYMVLSHFHADHIGGVRDFPKAQFIYL 133 P S+Y +TPV F E +S ++L GI PEEI+Y++LSHFH DH G+ DFPKA+ + Sbjct: 65 PYSVYAKLTPVHFTEEQSIKQQLLLDGIQPEEIKYIILSHFHGDHTAGLPDFPKAKILTF 124 Query: 134 RKSYEAVHRLGPIKALRAGFLPGLLPEDFTARSLPVDEYSPQRPLPPGF-PFTEAYDLLG 192 K+YE + + AL G L LP D R +D+ +P LP + F E YD+ Sbjct: 125 AKAYEDIKKRSKFGALLKGCLKDTLPVDLEQRMSFIDQ-TPSLNLPSTYGKFEEGYDVFD 183 Query: 193 DGSLLAVEMSGHAAGMIGLFVSGDGYDYL-LCADTVWSSRAFRENRRPHPAAGLIMSDRK 251 DGSL AV+++GHA G G+FV + LCAD VW S+ ++ P A L+ SD K Sbjct: 184 DGSLFAVDLTGHATGQFGIFVHLQSNKIVFLCADAVWLSKTYQNLVFPSKVANLLTSDPK 243 Query: 252 EYRHNFDRLRVIHENFPGLRIVPSHCREALALWGTGGV 289 YR N ++L + + P + IVP+HC GGV Sbjct: 244 SYRKNIEKLHHLSQTSPEIEIVPTHCEHTWDKIKAGGV 281 >Q638Z3.1 Q638Z3_BACCZ Putative uncharacterized protein Length = 287 Score = 224 bits (571), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 113/267 (42%), Positives = 155/267 (58%), Gaps = 3/267 (1%) Query: 14 SVSILSAGYCLHPELLTLKGGTIKPVAFPAGYALLRHPQHGPILFDTGYSSRFFEETAKL 73 S+ + GYC HPE + G+ K + FPA LL+HP+ G ILFDTGY+ F E T K Sbjct: 9 SLKLYDTGYCTHPEKIAYSKGSWKQICFPATVGLLQHPELGYILFDTGYAGHFKEATKKF 68 Query: 74 PASLYRHITPVVFKEGESAVERLREAGIAPEEIRYMVLSHFHADHIGGVRDFPKAQFIYL 133 P S+Y +TPV F E +S ++L GI PEEI+Y++LSHFH DH G+ DFPKA+ + Sbjct: 69 PYSVYAKLTPVHFTEEQSIKQQLLLDGIQPEEIKYIILSHFHGDHTAGLPDFPKAKILTF 128 Query: 134 RKSYEAVHRLGPIKALRAGFLPGLLPEDFTARSLPVDEYSPQRPLPPGF-PFTEAYDLLG 192 K+YE + + AL G L LP D R +D +P LP + F E YD+ G Sbjct: 129 AKAYEDIKKRSKFGALLKGCLKDTLPVDLEQRMTFIDR-TPTLNLPSTYGKFEEGYDVFG 187 Query: 193 DGSLLAVEMSGHAAGMIGLFVSGDGYDYL-LCADTVWSSRAFRENRRPHPAAGLIMSDRK 251 DGSL AV+++GHA G G+F+ + LCAD VW S+ ++ P A L+ SD K Sbjct: 188 DGSLFAVDLTGHATGQFGIFIHLQSNKIVFLCADAVWLSKTYQNLVFPSKVANLLTSDPK 247 Query: 252 EYRHNFDRLRVIHENFPGLRIVPSHCR 278 YR N ++L + + P + IVP+HC Sbjct: 248 SYRKNIEKLHHLSQTSPEIEIVPTHCE 274 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.141 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,950,206,929 Number of extensions: 86965780 Number of successful extensions: 189018 Number of sequences better than 1.0e-05: 188 Number of HSP's gapped: 188888 Number of HSP's successfully gapped: 188 Length of query: 290 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 156 Effective length of database: 1,798,280,193 Effective search space: 280531710108 Effective search space used: 280531710108 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)