BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0048.p (398 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZKH6.1 C0ZKH6_BREBN Putative uncharacterized protein 271 6e-71 Q4K3I9.1 Q4K3I9_PSEF5 Putative uncharacterized protein 249 3e-64 Q638Z1.1 Q638Z1_BACCZ Putative uncharacterized protein 228 8e-58 A9VL43.1 A9VL43_BACWK Putative uncharacterized protein 225 8e-57 B3Z451.1 B3Z451_BACCE Putative uncharacterized protein 224 1e-56 >C0ZKH6.1 C0ZKH6_BREBN Putative uncharacterized protein Length = 391 Score = 271 bits (694), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 162/400 (40%), Positives = 216/400 (54%), Gaps = 19/400 (4%) Query: 2 NVLITGGRAPVALELSRLLQAGGHRVYAAESAEYHLCRVSSAVERSFRAPPPRYNPEAYI 61 +VL+TGGRAP LEL+RLL + GHRV AESA HLC+ S VERS++ PPPR P+AYI Sbjct: 6 SVLLTGGRAPATLELARLLGSAGHRVIVAESAGRHLCQHSRYVERSYQVPPPRQQPDAYI 65 Query: 62 DLLARLVEELHIDVLIPLCEEIFYISAGLARLRGC-RVLSAEREALARLHHKGEFIAWAR 120 + L +++ ID+LIP CEEIFY+S G +L VL E L LH K F AR Sbjct: 66 EKLCEIMQREGIDLLIPTCEEIFYVSQGRDQLLDYGEVLVEGIEVLRSLHDKWLFAEMAR 125 Query: 121 ELGLTVPETRLLSSPEEWRIQTDEAAHKREAWVYKPAYSRFASKVILPRTVNGRQEGIGG 180 E+G VP T + S + R +A V KP YSRFA+ V + G Sbjct: 126 EVGALVPHTVRVQSSAQLREAMLQAGGPV---VLKPVYSRFAAHV----QIVADPSSAAG 178 Query: 181 PRSLAAPRGISSAAPWVAQQYITGEAICTYSVVHQGEVIAHAAYGSRYRTGRSGASVYFE 240 +L P + PW+ QQ+I G+ +C+Y+V G++ +A Y + + G+ GAS+YF Sbjct: 179 QSTLPEP---TVGQPWLVQQFIKGKQVCSYAVALDGQLTLYADYETTHTAGQ-GASIYFA 234 Query: 241 HLEHPAALDWVQRFSRASGFSGQIGFDFIQVQEGTLYPIECNPRATSGIHLFAAEDGLVQ 300 + +HP D+V RF + F GQI FDFI+ ++G LY IECNPR TSG+HLF + Sbjct: 235 YSDHPQVRDFVSRFVQRHTFRGQIAFDFIENEQGELYVIECNPRLTSGVHLFTGQHDAAT 294 Query: 301 ALLNPEQRALAGTVSTPRSGKKSMLALPMLACALRPGPAG--LAEWGRALRQAEDVIFRK 358 A + G P + ML + ML L G W L A DV+FR Sbjct: 295 AYFSDR-----GKNVFPAGKQACMLGMAMLTYGLAGMTNGEKAKRWVSDLLSARDVLFRW 349 Query: 359 SDPRPFREQLRIIYHACRLARRNKISVTEALTEDIEWNGE 398 DPRPF +Q ++ + R S+ T DIEWNGE Sbjct: 350 DDPRPFFDQFSMLADLAWQSFRTGKSMIACSTSDIEWNGE 389 >Q4K3I9.1 Q4K3I9_PSEF5 Putative uncharacterized protein Length = 384 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 161/400 (40%), Positives = 225/400 (56%), Gaps = 25/400 (6%) Query: 1 MNVLITGGRAPVALELSRLLQAGGHRVYAAESAEYHLCRVSSAVERSFRAPPPRYNPEAY 60 M VLI G RAP LE +R G V A+S L R S A E R P PR++P+A+ Sbjct: 1 MRVLILGARAPACLEWARAFSQAGWTVTVADSLAQPLSRFSRAAEHFVRLPEPRHDPDAW 60 Query: 61 IDLLARLVEELHIDVLIPLCEEIFYISAGLARLRG-CRVLSAEREALARLHHKGEFIAWA 119 I+ LA +V + ID+L+P CEE+FY++ GL RLR CRV +++ + L RLHHKG+F A Sbjct: 61 IEALAGVVRQQAIDLLLPTCEEVFYLAHGLERLRPLCRVFTSDFDLLHRLHHKGDFAAMT 120 Query: 120 RELGLTVPETRLLSSPEEWRIQTDEAAHKREAWVYKPAYSRFASKVILPRTVNGRQEGIG 179 + + P TR+L P +Q A H +A V+KPAYSRFAS+ ++ + Sbjct: 121 QGWDVAAPPTRVLHDPAA--VQALAAEH--DALVFKPAYSRFASQTLIRPS--------- 167 Query: 180 GPRSLAAPRGISSAAPWVAQQYITGEAICTYSVVHQGEVIAHAAYGSRYRTGRSGASVYF 239 P LA R SS APWVAQ+++ G+ C++SV+ G++ AH+ Y RYR GR G+ +YF Sbjct: 168 -PAQLAKVRP-SSDAPWVAQRFVPGQEYCSFSVLVDGQLRAHSCYQPRYRVGR-GSGIYF 224 Query: 240 EHLEHPAALDWVQRFSRASGFSGQIGFDFIQVQEGTLYPIECNPRATSGIHLFAAED-GL 298 ++++F RA+G++GQ+GFDFI+ +G + +ECNPRATSG+HLF + L Sbjct: 225 HSCAPAPIRAFLEQFGRATGYTGQVGFDFIEDHQGRFHVLECNPRATSGVHLFDDQRVQL 284 Query: 299 VQALLNPEQRALAGTVSTPRSGKKSMLALPMLACALRPGPAGLAEWGRALRQAEDVIFRK 358 V AL + AL T+ PR +ML L ALR + RQA DVI + Sbjct: 285 VTALGSEADAALEATLE-PRMIALAMLLLAAPQRALR------RTFWHDYRQARDVIVQD 337 Query: 359 SDPRPFREQLRIIYHACRLARRNKISVTEALTEDIEWNGE 398 D P QL + A + + A T DIEWNG+ Sbjct: 338 GDRGPLTAQLLSLSEIIGRALTRRCGLLAASTADIEWNGQ 377 >Q638Z1.1 Q638Z1_BACCZ Putative uncharacterized protein Length = 387 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 135/406 (33%), Positives = 198/406 (48%), Gaps = 37/406 (9%) Query: 3 VLITGGRAPVALELSRLLQAGGHRVYAAESAEYHLCRVSSAVERSFRAPPPRYNPEAYID 62 VLITG RAP L L RL GH V A+S Y L +VS + + + P P++ I Sbjct: 7 VLITGARAPATLHLCRLFHNAGHTVIIADSIPYPLSKVSKSTDYFYEIPSPKWKTNESIR 66 Query: 63 LLARLVEELHIDVLIPLCEEIFYISAGLARLRG-CRVLSAEREALARLHHKGEFIAWARE 121 L +++ ++D+LIP CEE+FYIS L C VL + + L LH+K EFI + Sbjct: 67 ALLSIIQRHNVDLLIPTCEEVFYISKYKEELSAFCHVLVDDFQKLLLLHNKWEFIQFVEN 126 Query: 122 LGLTVPETRLLSSPEEWRIQTDEA----AHKREA---WVYKPAYSRFASKVILPRTVNGR 174 LG VP T +RI +EA HK +A +V KP YSRF+ KV Sbjct: 127 LGWQVPAT--------YRINNEEAIGSMMHKTQAHTPFVLKPIYSRFSDKVEF------- 171 Query: 175 QEGIGGPRSLAAPRGISSAAPWVAQQYITGEAICTYSVVHQGEVIAHAAYGSRYRTGRSG 234 + A + + ++ Q++I G C+YS+ GEV+AH+ Y + + G G Sbjct: 172 -----MTKEAALKESMIHKSNYIMQEFIQGTQHCSYSIAQSGEVLAHSTYKTEFTAGL-G 225 Query: 235 ASVYFEHLEHPAALDWVQRFSRASGFSGQIGFDFIQVQEGTLYPIECNPRATSGIHLFAA 294 A++ F+H+ H +V + FSGQI FDFI + G PIECNPR TSG+HLF Sbjct: 226 ATIAFQHMNHSKIDQFVTHIVKELNFSGQIAFDFIVTENGDAIPIECNPRTTSGLHLFDE 285 Query: 295 EDGLVQALLNPEQRALAGTVSTPRSGKKSMLALPMLACAL--RPGPAGLAEWGRALRQAE 352 E ++ A N + P+ + + L ML W + L Sbjct: 286 E--ILPAFFNEK----VNNSFIPKQNSECAIRLAMLLYGFPYLKSKQKRKRWLKVLCSYP 339 Query: 353 DVIFRKSDPRPFREQLRIIYHACRLARRNKISVTEALTEDIEWNGE 398 D+++R +D +PF Q +Y R + + + ++ E T DI W+GE Sbjct: 340 DIVYRHNDWKPFFYQFFSMYKLWRESYKYERTILEQTTYDISWDGE 385 >A9VL43.1 A9VL43_BACWK Putative uncharacterized protein Length = 387 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 135/405 (33%), Positives = 202/405 (49%), Gaps = 35/405 (8%) Query: 3 VLITGGRAPVALELSRLLQAGGHRVYAAESAEYHLCRVSSAVERSFRAPPPRYNPEAYID 62 VLITG RAP L + RL GH V A+S Y L +VS + + + P P++ I Sbjct: 7 VLITGARAPATLHVCRLFHNAGHTVIIADSIPYPLSKVSKSTDYFYEIPSPKWKTNESIR 66 Query: 63 LLARLVEELHIDVLIPLCEEIFYISAGLARLRG-CRVLSAEREALARLHHKGEFIAWARE 121 L +++ ++D+LIP CEE+FYIS L C VL + + L+ LH+K EFI + Sbjct: 67 ALLSIIKRHNVDLLIPTCEEVFYISKYREELSAFCHVLVDDFQKLSLLHNKWEFIQFVAN 126 Query: 122 LGLTVPETRLLSSPEEWRIQTDEA----AHKREA---WVYKPAYSRFASKVILPRTVNGR 174 LG VP T +RI +EA HK A +V KP +SRF+ KV + Sbjct: 127 LGWQVPAT--------YRINNEEAISSMMHKTPAHTPFVRKPIFSRFSDKVEFITKEDAL 178 Query: 175 QEG-IGGPRSLAAPRGISSAAPWVAQQYITGEAICTYSVVHQGEVIAHAAYGSRYRTGRS 233 +E I P ++ Q++I G C+YS+ GEV+AH+ Y + + G Sbjct: 179 KESMIDKPN-------------YIMQEFIRGTQHCSYSIAQSGEVLAHSTYKTEFTAGL- 224 Query: 234 GASVYFEHLEHPAALDWVQRFSRASGFSGQIGFDFIQVQEGTLYPIECNPRATSGIHLFA 293 GA++ F+H HP +V+ + FSGQI FDFI ++G PIECNPR TSG+HLF Sbjct: 225 GATIAFQHTNHPKIDQFVRHIVKELNFSGQIAFDFIVTEDGDAIPIECNPRTTSGLHLFD 284 Query: 294 AEDGLVQALLNPEQRALAGTVSTPRSGKKSMLALPMLACALRPGPAGLAEWGRALRQAED 353 E ++ A + ++ + P S LA+ + W + L D Sbjct: 285 EE--ILPAFFH--EKVNNTLIPRPNSECAIRLAMLLYGFPYLKSKQKRKRWLKVLCSYPD 340 Query: 354 VIFRKSDPRPFREQLRIIYHACRLARRNKISVTEALTEDIEWNGE 398 +++R +D +PF Q +Y R + + + ++ E T DI W+GE Sbjct: 341 IVYRHNDWKPFFYQFFSMYKLWRESYKQERTILEQTTYDISWDGE 385 >B3Z451.1 B3Z451_BACCE Putative uncharacterized protein Length = 387 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 135/406 (33%), Positives = 197/406 (48%), Gaps = 37/406 (9%) Query: 3 VLITGGRAPVALELSRLLQAGGHRVYAAESAEYHLCRVSSAVERSFRAPPPRYNPEAYID 62 VLITG RAP L L RL GH V A+S Y L +VS + + + P P++ I Sbjct: 7 VLITGARAPATLHLCRLFHNAGHTVIIADSIPYPLSKVSKSTDYFYEIPSPKWKTNESIR 66 Query: 63 LLARLVEELHIDVLIPLCEEIFYISAGLARLRG-CRVLSAEREALARLHHKGEFIAWARE 121 L +++ ++D+LIP CEE+FYIS L C VL + + L LH+K EFI + Sbjct: 67 ALLSIIQRHNVDLLIPTCEEVFYISKYKEELSAFCHVLVDDFQKLLLLHNKWEFIQFVEN 126 Query: 122 LGLTVPETRLLSSPEEWRIQTDEA----AHKREA---WVYKPAYSRFASKVILPRTVNGR 174 LG VP T +RI +EA HK A +V KP YSRF+ KV Sbjct: 127 LGWQVPAT--------YRINNEEAIRSMMHKTPAHTPFVLKPIYSRFSDKVEF------- 171 Query: 175 QEGIGGPRSLAAPRGISSAAPWVAQQYITGEAICTYSVVHQGEVIAHAAYGSRYRTGRSG 234 + A + + ++ Q++I G C+YS+ GEV+AH+ Y + + G G Sbjct: 172 -----MTKEAALKESMIHKSNYIMQEFIQGTQHCSYSIAQSGEVLAHSTYKTEFTAGL-G 225 Query: 235 ASVYFEHLEHPAALDWVQRFSRASGFSGQIGFDFIQVQEGTLYPIECNPRATSGIHLFAA 294 A++ F+ + H +V + FSGQI FDFI + G PIECNPR TSG+HLF Sbjct: 226 ATIAFQPMNHSKIDQFVTHIVKELNFSGQIAFDFIVTENGDAIPIECNPRTTSGLHLFDE 285 Query: 295 EDGLVQALLNPEQRALAGTVSTPRSGKKSMLALPMLACAL--RPGPAGLAEWGRALRQAE 352 E ++ A N + V P+ + + L ML W + L Sbjct: 286 E--ILPAFFNEK----VNNVFIPKQNSECAIRLAMLLYGFPYLKSKQKRKRWLKVLCSYP 339 Query: 353 DVIFRKSDPRPFREQLRIIYHACRLARRNKISVTEALTEDIEWNGE 398 D+++R +D +PF Q +Y R + + + ++ E T DI W+GE Sbjct: 340 DIVYRHNDWKPFFYQFFSMYKLWRESYKYERTILEQTTYDISWDGE 385 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,450,024,144 Number of extensions: 101751901 Number of successful extensions: 219318 Number of sequences better than 1.0e-05: 90 Number of HSP's gapped: 219031 Number of HSP's successfully gapped: 92 Length of query: 398 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 260 Effective length of database: 1,760,596,133 Effective search space: 457754994580 Effective search space used: 457754994580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)