BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0584.0043.p
         (109 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q0TUB6.1 Q0TUB6_CLOP1 Putative uncharacterized protein                 84   4e-15
Q0SW63.1 Q0SW63_CLOPS Putative uncharacterized protein                 84   4e-15
B1V0I7.1 B1V0I7_CLOPE Putative uncharacterized protein                 84   4e-15
B1RP67.1 B1RP67_CLOPE Putative uncharacterized protein                 84   5e-15
Q8XNK3.1 Q8XNK3_CLOPE Putative uncharacterized protein CPE0330         83   7e-15

>Q0TUB6.1 Q0TUB6_CLOP1 Putative uncharacterized protein
          Length = 126

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 55/93 (59%)

Query: 13  HLGDALWASMIYFACRVLFTRKPLWQSLLLSLCFSFGIEFSQLYQGEWINXXXXXXXXXX 72
           +LGD LWA+M+YF  R L  +     S L+++ FSFGIEFSQ+YQ +WIN          
Sbjct: 33  YLGDVLWATMVYFGFRFLLPKLNTNTSFLIAILFSFGIEFSQIYQAKWINNIRATTLGGL 92

Query: 73  XXXKGFLWIDLLRYTVGIVFSYALDRFCWPKKS 105
               GFLW DLL YT+GI+    +DR  + KK 
Sbjct: 93  VLGHGFLWSDLLCYTIGILIGSFIDRLAFIKKK 125


>Q0SW63.1 Q0SW63_CLOPS Putative uncharacterized protein
          Length = 126

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 55/93 (59%)

Query: 13  HLGDALWASMIYFACRVLFTRKPLWQSLLLSLCFSFGIEFSQLYQGEWINXXXXXXXXXX 72
           +LGD LWA+M+YF  R L  +     S L+++ FSFGIEFSQ+YQ +WIN          
Sbjct: 33  YLGDVLWATMVYFGFRFLLPKLNTNTSFLIAILFSFGIEFSQIYQAKWINNIRATTLGGL 92

Query: 73  XXXKGFLWIDLLRYTVGIVFSYALDRFCWPKKS 105
               GFLW DLL YT+GI+    +DR  + KK 
Sbjct: 93  VLGHGFLWSDLLCYTIGILIGSFIDRLAFIKKK 125


>B1V0I7.1 B1V0I7_CLOPE Putative uncharacterized protein
          Length = 128

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 55/93 (59%)

Query: 13  HLGDALWASMIYFACRVLFTRKPLWQSLLLSLCFSFGIEFSQLYQGEWINXXXXXXXXXX 72
           +LGD LWA+M+YF  R L  +     S L+++ FSFGIEFSQ+YQ +WIN          
Sbjct: 33  YLGDVLWATMVYFGFRFLLPKLNTNTSFLIAILFSFGIEFSQIYQAKWINNIRATTLGGL 92

Query: 73  XXXKGFLWIDLLRYTVGIVFSYALDRFCWPKKS 105
               GFLW DLL YT+GI+    +DR  + KK 
Sbjct: 93  VLGHGFLWSDLLCYTIGILIGSFIDRLAFIKKK 125


>B1RP67.1 B1RP67_CLOPE Putative uncharacterized protein
          Length = 126

 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 55/93 (59%)

Query: 13  HLGDALWASMIYFACRVLFTRKPLWQSLLLSLCFSFGIEFSQLYQGEWINXXXXXXXXXX 72
           +LGD LWA+M+YF  R LF +     S L+++ FSFGIEFSQ+YQ +WIN          
Sbjct: 33  YLGDVLWATMVYFGFRFLFPKLNTNTSFLIAILFSFGIEFSQIYQAKWINNIRATTLGGL 92

Query: 73  XXXKGFLWIDLLRYTVGIVFSYALDRFCWPKKS 105
                FLW DLL YT+GI+    +DR  + KK 
Sbjct: 93  VLGHSFLWSDLLCYTIGILIGSFIDRLAFIKKK 125


>Q8XNK3.1 Q8XNK3_CLOPE Putative uncharacterized protein CPE0330
          Length = 126

 Score = 83.2 bits (204), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 54/93 (58%)

Query: 13  HLGDALWASMIYFACRVLFTRKPLWQSLLLSLCFSFGIEFSQLYQGEWINXXXXXXXXXX 72
           +LGD LWA+M+YF  R L  +     S L+++ FSFGIEFSQ+YQ +WIN          
Sbjct: 33  YLGDVLWATMVYFGFRFLLPKLNTNTSFLIAILFSFGIEFSQIYQAKWINNIRATTLGGL 92

Query: 73  XXXKGFLWIDLLRYTVGIVFSYALDRFCWPKKS 105
               GFLW DLL YT+GI+    +DR    KK 
Sbjct: 93  VLGHGFLWSDLLCYTIGILIGSFIDRLALIKKK 125


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.330    0.143    0.510 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 564,442,867
Number of extensions: 14835573
Number of successful extensions: 25333
Number of sequences better than 1.0e-05: 110
Number of HSP's gapped: 25241
Number of HSP's successfully gapped: 110
Length of query: 109
Length of database: 3,060,696,203
Length adjustment: 77
Effective length of query: 32
Effective length of database: 2,335,278,048
Effective search space: 74728897536
Effective search space used: 74728897536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 125 (52.8 bits)