BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0024.p (311 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8FX68.1 B8FX68_DESHD Glycosyl transferase group 1 142 3e-32 Q24P21.1 Q24P21_DESHY Putative uncharacterized protein 142 3e-32 Q67PP1.1 Q67PP1_SYMTH Putative uncharacterized protein 130 2e-28 Q67PP2.1 Q67PP2_SYMTH Putative uncharacterized protein 129 4e-28 Q24P17.1 Q24P17_DESHY Putative uncharacterized protein 121 8e-26 >B8FX68.1 B8FX68_DESHD Glycosyl transferase group 1 Length = 332 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 15/289 (5%) Query: 2 LRESDFPVSDIIVSNFYTTVPVSEAASQQGKGMHIRLSLCYEPLFLPENEVSFPSYHITD 61 L + P D I+ NF+ TV + A KG +RLSL +EPL++ E E + +YHI Sbjct: 56 LTPATIPAGDFILPNFWPTVFPAWGAQ---KGRVVRLSLGFEPLWVKEKENALATYHIDA 112 Query: 62 KLLVLSQWQQELIALSHGITGSIVPVGISTGFRNQHIRH--MLQEPLNITAILRKEENGF 119 +L +SQW +++I G +I+P G+ + H + M I ILR +E+G+ Sbjct: 113 PILSISQWHRQIIRQETGRDSTIIPGGVDLSLFHPHPKKSLMANTGPTIAYILRSKEHGY 172 Query: 120 ASHREQGYLVKQLDIVRHNAPQVNINFICPPDEFYSSESLQRMKAEGKYRFFTPKNDEEL 179 + + + I + P + + P Y S Y+ D EL Sbjct: 173 TWKGSDDFW-EAIRITAQSFPHFTLQIVAPEGAAYPSPV--------PYQPIVATTDAEL 223 Query: 180 CYHYNGADIFVSASAFDAGSLPGLEAMRCGAALVSVYSGGNLQYARHEENCLLSYRYENR 239 Y ADIFVS S F+A ++P LEAM CG A+V+ +GGN YA++ ENCL+ + + Sbjct: 224 ALFYAQADIFVSTSYFEAFAMPPLEAMACGTAVVTTDNGGNRDYAKNGENCLVVPPSDIQ 283 Query: 240 LAHDVLRLIADPAL-RARLAEQGEADSLAWTWDNSVNSMEQAVVRFMQN 287 L + A R RLA+ G+ + AWTW +S + +EQ + + +N Sbjct: 284 QLSQSLLHLLTQAQERQRLAQAGQHTAQAWTWRHSADRLEQFLFQLSRN 332 >Q24P21.1 Q24P21_DESHY Putative uncharacterized protein Length = 332 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 15/289 (5%) Query: 2 LRESDFPVSDIIVSNFYTTVPVSEAASQQGKGMHIRLSLCYEPLFLPENEVSFPSYHITD 61 L + P D I+ NF+ TV + A KG +RLSL +EPL++ E E + +YHI Sbjct: 56 LTPATIPAGDFILPNFWPTVFPAWGAQ---KGRVVRLSLGFEPLWVKEKENALATYHIDA 112 Query: 62 KLLVLSQWQQELIALSHGITGSIVPVGISTGFRNQHIRH--MLQEPLNITAILRKEENGF 119 +L +SQW +++I G +I+P G+ + H + M I ILR +E+G+ Sbjct: 113 PILSISQWHRQIIRQETGRDSTIIPGGVDLSLFHPHPKKSLMANTGPTIAYILRSKEHGY 172 Query: 120 ASHREQGYLVKQLDIVRHNAPQVNINFICPPDEFYSSESLQRMKAEGKYRFFTPKNDEEL 179 + + + I + P + + P Y S Y+ D EL Sbjct: 173 TWKGSDDFW-EAIRITAQSFPHFTLQIVAPEGAAYPSPL--------PYQPIVATTDAEL 223 Query: 180 CYHYNGADIFVSASAFDAGSLPGLEAMRCGAALVSVYSGGNLQYARHEENCLLSYRYENR 239 Y ADIFVS S F+A ++P LEAM CG A+V+ +GGN YA++ ENCL+ + + Sbjct: 224 ALFYAQADIFVSTSYFEAFAMPPLEAMACGTAVVTTDNGGNRDYAKNGENCLVVPPSDIQ 283 Query: 240 LAHDVLRLIADPAL-RARLAEQGEADSLAWTWDNSVNSMEQAVVRFMQN 287 L + A R RLA+ G+ + AWTW +S + +EQ + + +N Sbjct: 284 QLSQSLLHLLTQAQERQRLAQAGQHTAQAWTWRHSADRLEQFLFQLSRN 332 >Q67PP1.1 Q67PP1_SYMTH Putative uncharacterized protein Length = 345 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 9/294 (3%) Query: 5 SDFPVSDIIVSNFYTTVPVSEAASQQGKGMHIRLSLCYEPLFLPENEVSFPSYHITDKLL 64 S P +D+I+ NF+ TV A++ GKG +R S +EP+++PEN+ + +Y ++ Sbjct: 60 SVIPEADVILPNFWPTV---RPAAESGKGRVVRFSTGFEPMWVPENKAALDTYLQGFPVI 116 Query: 65 VLSQWQQELIALSHGITGSIVPVGISTGFRNQHIRHMLQEPLNITAILRKEENGFASHRE 124 L + +I + G I G+ G + + ++ + I R E +G+ ++ Sbjct: 117 TLGPHLRRIIREATGQDCFIAQPGVD-GRVFRPLDGAPRDGRTVFFIYRSEAHGY-HYKG 174 Query: 125 QGYLVKQLDIVRHNAPQVNINFICPPDEFYSSESLQRMKAEGKYRFFTPKNDEELCYHYN 184 G +++VR P V + + + + R P++D + YN Sbjct: 175 NGDFAAAMELVRRQMPDVRVLVAATEGDSPGTPPPPFAFPFTEIR---PEDDRAMAEAYN 231 Query: 185 GADIFVSASAFDAGSLPGLEAMRCGAALVSVYSGGNLQYARHEENCLLS-YRYENRLAHD 243 A ++V AS F+A SLP LEAM CG +V GG YAR ENCLLS + +RLA Sbjct: 232 RAAVYVLASWFEALSLPPLEAMACGTPVVLTDCGGVRDYARPGENCLLSPPKQPDRLAGY 291 Query: 244 VLRLIADPALRARLAEQGEADSLAWTWDNSVNSMEQAVVRFMQNIPHNEPARTP 297 +L ++ +P LR+RLAE G + WTW + +E A+ + MQ + AR P Sbjct: 292 ILSVLREPDLRSRLAEGGLRTAAVWTWKRFGDQLEDALRQIMQGHVQPQEARDP 345 >Q67PP2.1 Q67PP2_SYMTH Putative uncharacterized protein Length = 333 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 17/277 (6%) Query: 7 FPVSDIIVSNFYTTVPVSEAASQQGKGMHIRLSLCYEPLFLPENEVSFPSYHITDKLLVL 66 FP SDII++NF++TVP A + G G +R SL YEPL++ + +Y + L + Sbjct: 62 FPKSDIILTNFWSTVP---PAWESGAGQVVRFSLGYEPLWVKDPRAK-ETYLLPIPTLAI 117 Query: 67 SQWQQELIALSHGITGSIVPVGIST-GFRNQHIRHMLQEPLNITAILRKEENGFASHREQ 125 SQW I G ++ +GI F + I I R + G+ Sbjct: 118 SQWLASRIEAVAGRRPQVIHLGIEQETFVPPPPDAPPRS--GILYIWRDKTLGYGFKGTD 175 Query: 126 GYLVKQLDIVRHNAPQVNINFICPPDEFYSSESLQRMKAEGKYRFFTPKNDEELCYHYNG 185 + V+ L V P++ + + P R+ +R D EL Y Sbjct: 176 DF-VQALGPVMQRYPRLPLTIVTP--------VACRVHLPYPHRVVVAPTDAELAELYQQ 226 Query: 186 ADIFVSASAFDAGSLPGLEAMRCGAALVSVYSGGNLQYARHEENCLL-SYRYENRLAHDV 244 A +FVS S F+ S+P LEAM CGAA+V+ GG +YARH+ NCLL R LA + Sbjct: 227 AAVFVSTSWFEGFSMPPLEAMSCGAAVVATNCGGIGEYARHQVNCLLVPPRTPMALAQAI 286 Query: 245 LRLIADPALRARLAEQGEADSLAWTWDNSVNSMEQAV 281 L ++ DPALR RL G A + W+W + M +A+ Sbjct: 287 LTVLGDPALRQRLGAAGVATARDWSWQRTWKEMHEAL 323 >Q24P17.1 Q24P17_DESHY Putative uncharacterized protein Length = 327 Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 139/288 (48%), Gaps = 34/288 (11%) Query: 2 LRESDFPVSDIIVSNFYTTVPVSEAASQQGKGMHIRLSLCYEPLFLPENEVSFPSYHITD 61 L ++ P D I+ NFYTTV S ASQ+GK +RLSL YEPL++P+ E + SY I Sbjct: 57 LSPANIPYGDFILPNFYTTVG-SAWASQKGK--VVRLSLGYEPLWVPDTESAKQSYLIDA 113 Query: 62 KLLVLSQWQQELIALSHGITGSIVPVGISTG-FRNQHIRHMLQEPLNITAILRKEENGFA 120 +L +SQW ++LI G +++ G+ FR R NI ILR G+ Sbjct: 114 PILSISQWHRQLILQETGRNSTVISCGVDHHLFRPCPKRSSQTGRKNIFYILRNPALGYI 173 Query: 121 SHREQGY-----LVKQLD----IVRHNAPQVNINFICPPDEFYSSESLQRMKAEGKYRFF 171 + + L+K LD + A Q+ +F C R Sbjct: 174 WKGGEDFFNALSLLKGLDFEVTVTLTEATQLTGSFPC--------------------RTV 213 Query: 172 TPKNDEELCYHYNGADIFVSASAFDAGSLPGLEAMRCGAALVSVYSGGNLQYARHEENCL 231 +D+E+ Y AD+FV S F+A LP LEAM CG A+++ GG+ YA + ENCL Sbjct: 214 YAASDQEMAALYGEADLFVYNSYFEAFGLPPLEAMACGTAVITTDCGGSRDYAHNGENCL 273 Query: 232 LSYRYE-NRLAHDVLRLIADPALRARLAEQGEADSLAWTWDNSVNSME 278 + + N+L + L+ R RLA G A + AWTW + + +E Sbjct: 274 VVPPSDINQLQQALHLLLTQDGERQRLASAGFAFAQAWTWQRTADQVE 321 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,899,433,349 Number of extensions: 78415574 Number of successful extensions: 186880 Number of sequences better than 1.0e-05: 34 Number of HSP's gapped: 187166 Number of HSP's successfully gapped: 34 Length of query: 311 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 176 Effective length of database: 1,788,859,178 Effective search space: 314839215328 Effective search space used: 314839215328 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)