BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0020.p (370 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z9R1.1 C0Z9R1_BREBN Putative uncharacterized protein 427 e-118 B3KGW9.1 B3KGW9_9BACI Glycosyl transferase family 2 423 e-116 B1D7Z8.1 B1D7Z8_9BACL Glycosyl transferase family 2 407 e-111 C2Q7Z0.1 C2Q7Z0_BACCE Glycosyl transferase, group 2 394 e-108 A9VGI6.1 A9VGI6_BACWK Glycosyl transferase family 2 390 e-106 >C0Z9R1.1 C0Z9R1_BREBN Putative uncharacterized protein Length = 623 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 201/353 (56%), Positives = 258/353 (73%) Query: 2 IEISLCMIVRNEENSLPRCLSSAVSIADEIVVVDTGSTDRTKEIAASFGAVIYDFTWIED 61 I ISLCMIV+NEE++L RCLS+ + DEI++VDTGSTDRTKEIA+++G IYDF WI+D Sbjct: 270 ISISLCMIVKNEEDALERCLSTVADLVDEIIIVDTGSTDRTKEIASNYGCTIYDFEWIDD 329 Query: 62 FSAARNFAFSKATKDYILWLDADDYLKDKDQELFRGLKTSLPGHVDSVNMPYNLAFDAAG 121 FSAARN+AFSKAT YILWLDADD L +KD++LFR L+ +L +DSV M YNL+ D+ G Sbjct: 330 FSAARNYAFSKATCPYILWLDADDILLEKDRQLFRELRFTLNYSIDSVTMNYNLSVDSNG 389 Query: 122 NVVTSLRRNRLVRRSCNFKWIGPVHEYLEVYGPSYSSDVCITHEKDKAYTDRNLRIYQKR 181 NV S+RRNRLV+R F+WIGPVHEYLEV G +SD+ ITH K K YTDRNL+IY++R Sbjct: 390 NVAYSIRRNRLVKRDRRFRWIGPVHEYLEVSGNVINSDISITHNKQKEYTDRNLQIYRRR 449 Query: 182 AAAGEAFSPRDQYYYANELRDHGMHEEACRYYTLFLEGGQGWIEDNYQACLRLAECQERL 241 A GE FSPRD YYYANELRD+ HEEA +YT FL QGW+EDN ACL+LA C L Sbjct: 450 DAKGEEFSPRDLYYYANELRDNQYHEEAITFYTKFLNTQQGWVEDNINACLKLASCYSHL 509 Query: 242 GNREEAFQALCRTLKIDKPRAEFCCRLGAWHLEKNQLHQAVYWYELAVMLPRQNDSMGIR 301 R+ +L RT D+PRAE CC++GA+H+E A++WY+LA + + + Sbjct: 510 YERQNVLSSLYRTFNYDRPRAEACCQIGAFHVEDKNWLLAIFWYDLATKVEPPAEKLAHI 569 Query: 302 NESYSTWLPNLQLALCYDRLGQHEKANLFNETALRYHPAHPSMLYNRNYFKTL 354 + TWLP+LQL LCY ++G +EK+ N+ A Y+P HPS+LYN+ YF++L Sbjct: 570 DHVSWTWLPHLQLCLCYSQIGDNEKSRHHNDIAYLYNPTHPSILYNKKYFESL 622 >B3KGW9.1 B3KGW9_9BACI Glycosyl transferase family 2 Length = 369 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 212/357 (59%), Positives = 255/357 (71%), Gaps = 2/357 (0%) Query: 1 MIEISLCMIVRNEENSLPRCLSSAVSIADEIVVVDTGSTDRTKEIAASFGAVIYDFTWIE 60 MI ISLCMIV+NEE+ L RCLS I DEIVVVDTGSTDRTKEIA SF AV+YDF WI+ Sbjct: 1 MIAISLCMIVKNEEHHLNRCLSRIADIVDEIVVVDTGSTDRTKEIARSFQAVVYDFEWID 60 Query: 61 DFSAARNFAFSKATKDYILWLDADDYLKDKDQELFRGLKTSLPGHVDSVNMPYNLAFDAA 120 DF+AARNFAFSKAT+DYILWLDADD L ++D+ LK +L +DSV M Y+L+ D Sbjct: 61 DFAAARNFAFSKATQDYILWLDADDVLLEEDRLKLIALKENLAPDIDSVTMLYHLSSDEF 120 Query: 121 GNVVTSLRRNRLVRRSCNFKWIGPVHEYLEVYGPSYSSDVCITH--EKDKAYTDRNLRIY 178 GNV LRRNRLV+RS F+WIGPVHEYLEVYG +SDV ITH T RNLRIY Sbjct: 121 GNVTFRLRRNRLVKRSRAFRWIGPVHEYLEVYGHVMNSDVAITHLSSNHDQDTGRNLRIY 180 Query: 179 QKRAAAGEAFSPRDQYYYANELRDHGMHEEACRYYTLFLEGGQGWIEDNYQACLRLAECQ 238 +R AAGE+F+PRD +YYANEL+DH + E+A YY FL +GWIED AC RL++C Sbjct: 181 VQREAAGESFTPRDLFYYANELKDHRLFEKAIDYYERFLHTEKGWIEDVLSACSRLSDCH 240 Query: 239 ERLGNREEAFQALCRTLKIDKPRAEFCCRLGAWHLEKNQLHQAVYWYELAVMLPRQNDSM 298 LGN + AF++ R+L+ PR+EFCCR+G LEKNQ A+YWY+LA L D M Sbjct: 241 HELGNGQAAFESSLRSLQYAPPRSEFCCRIGYHFLEKNQYDTAIYWYKLATELKLPPDYM 300 Query: 299 GIRNESYSTWLPNLQLALCYDRLGQHEKANLFNETALRYHPAHPSMLYNRNYFKTLL 355 G N S+STWLP+LQLA+CYDR+G + AN NE AL Y P +ML N+ YF+ L Sbjct: 301 GFHNPSFSTWLPHLQLAVCYDRIGAYAIANQHNEKALAYRPGDETMLANQEYFRNKL 357 >B1D7Z8.1 B1D7Z8_9BACL Glycosyl transferase family 2 Length = 373 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 193/355 (54%), Positives = 251/355 (70%) Query: 1 MIEISLCMIVRNEENSLPRCLSSAVSIADEIVVVDTGSTDRTKEIAASFGAVIYDFTWIE 60 MI ISLC+IVRNEE+ L RCL S IADEI+VVDTGS DRTKEIA+ + IYDF WI+ Sbjct: 1 MISISLCLIVRNEEDVLARCLDSVKGIADEIIVVDTGSVDRTKEIASDYTPKIYDFEWID 60 Query: 61 DFSAARNFAFSKATKDYILWLDADDYLKDKDQELFRGLKTSLPGHVDSVNMPYNLAFDAA 120 F+AARNFAF KAT +YILWLDADD K+++Q LK SL VD+V+M YNL D Sbjct: 61 HFAAARNFAFGKATCEYILWLDADDIFKEEEQVKLLELKASLSTEVDTVSMLYNLTQDET 120 Query: 121 GNVVTSLRRNRLVRRSCNFKWIGPVHEYLEVYGPSYSSDVCITHEKDKAYTDRNLRIYQK 180 G V LRRNRLV+RS F+WIG VHEYLEVYG ++++D+ +TH + DRNLRIY++ Sbjct: 121 GAVTNRLRRNRLVKRSRQFRWIGAVHEYLEVYGAAFAADIAVTHASTRHDNDRNLRIYEQ 180 Query: 181 RAAAGEAFSPRDQYYYANELRDHGMHEEACRYYTLFLEGGQGWIEDNYQACLRLAECQER 240 R A G+ SPRD YYYANEL+DH ++E A YY+LFL+ +GW+EDN AC +LA+C Sbjct: 181 RLAKGDELSPRDLYYYANELKDHSLNERAVHYYSLFLQSKRGWVEDNIAACGKLADCYAS 240 Query: 241 LGNREEAFQALCRTLKIDKPRAEFCCRLGAWHLEKNQLHQAVYWYELAVMLPRQNDSMGI 300 LGN+E A ++ ++ PRA+ CCR+G +HL+ A +WYE A+ PRQ+++ + Sbjct: 241 LGNQELALESALQSFSYGSPRADNCCRIGYYHLQVGAYETAAFWYESALRAPRQDEAWSM 300 Query: 301 RNESYSTWLPNLQLALCYDRLGQHEKANLFNETALRYHPAHPSMLYNRNYFKTLL 355 +N S STWLP+LQL +CYD+LG+ KA NE A Y P HPS+ +N+ Y + LL Sbjct: 301 QNTSCSTWLPHLQLCVCYDKLGEWLKAYEHNEIARAYRPDHPSVQHNKTYLEGLL 355 >C2Q7Z0.1 C2Q7Z0_BACCE Glycosyl transferase, group 2 Length = 359 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 189/354 (53%), Positives = 251/354 (70%), Gaps = 1/354 (0%) Query: 2 IEISLCMIVRNEENSLPRCLSSAVSIADEIVVVDTGSTDRTKEIAASFGAVIYDFTWIED 61 I ISLCMIV++EE ++ +CL S I DEI++VDTGSTD TKEI + A IYDF WIED Sbjct: 5 ITISLCMIVKDEEQTISKCLESVKGIVDEIIIVDTGSTDATKEIVQKYDAKIYDFEWIED 64 Query: 62 FSAARNFAFSKATKDYILWLDADDYLKDKDQELFRGLKTSLPGHVDSVNMPYNLAFDAAG 121 FSAARNFAFSKATK+YILWLDADD + +D++ F LK +L D+V+M Y L FDA G Sbjct: 65 FSAARNFAFSKATKEYILWLDADDIIATEDRKKFLQLKDTLHRSTDAVSMHYYLTFDAEG 124 Query: 122 NVVTSLRRNRLVRRSCNFKWIGPVHEYLEVYGPSYSSDVCITHEKDKAYTDRNLRIYQKR 181 SLRR RLV+RS NF+W G +HEYLEVYG +SDV ++H+K K YT+RNL+IY+K Sbjct: 125 KPTHSLRRYRLVKRSRNFQWHGFIHEYLEVYGNLINSDVGVSHKKVKVYTNRNLKIYEKH 184 Query: 182 AAAGEAFSPRDQYYYANELRDHGMHEEACRYYTLFLEGGQGWIEDNYQACLRLAECQERL 241 +G+ FSPRD YYYANE +DHG++E+A + YT FL+ G+GW+EDN QACL+ AEC L Sbjct: 185 LESGKEFSPRDVYYYANECKDHGLYEKAIQGYTKFLDEGKGWVEDNIQACLKRAECYLAL 244 Query: 242 GNREEAFQALCRTLKIDKPRAEFCCRLGAWHLEKNQLHQAVYWYELAVMLPRQNDSMGIR 301 N +++ + + D PR E CC LG L++ + +A+YWY A+ PR DS +R Sbjct: 245 ENLKQSIDSCLESFMYDIPRGELCCHLGRVFLQQGEYSKAIYWYHAAIDGPRPKDSPFVR 304 Query: 302 NESYSTWLPNLQLALCYDRLGQHEKANLFNETALRYHPAHPSMLYNRNYFKTLL 355 E + TWLP++QL +CYDR+ ++EKA NE A ++ P +PS+ YNR YF ++ Sbjct: 305 EECH-TWLPHIQLCICYDRIKEYEKAIYHNEEAAKFIPNNPSIEYNRKYFDSVF 357 >A9VGI6.1 A9VGI6_BACWK Glycosyl transferase family 2 Length = 359 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/353 (52%), Positives = 250/353 (70%), Gaps = 1/353 (0%) Query: 2 IEISLCMIVRNEENSLPRCLSSAVSIADEIVVVDTGSTDRTKEIAASFGAVIYDFTWIED 61 I ISLCMIV++EE ++ +CL S S+ DEI++VDTGSTD TKEI + A +YDF WIED Sbjct: 5 ITISLCMIVKDEEQTISKCLESVKSVVDEIIIVDTGSTDGTKEIVKKYDAKVYDFQWIED 64 Query: 62 FSAARNFAFSKATKDYILWLDADDYLKDKDQELFRGLKTSLPGHVDSVNMPYNLAFDAAG 121 FSAARNFAFSKATK+YILWLDADD + +D + LK +L D+V+M Y L FD G Sbjct: 65 FSAARNFAFSKATKEYILWLDADDIIDTEDIKKLLQLKHTLDRSTDAVSMKYYLTFDIEG 124 Query: 122 NVVTSLRRNRLVRRSCNFKWIGPVHEYLEVYGPSYSSDVCITHEKDKAYTDRNLRIYQKR 181 N SLRR RLV RS NF+W G VHEYLEVYG +SDV ++H+K+KAYT+RNL+IY+K Sbjct: 125 NPTHSLRRYRLVNRSKNFQWYGFVHEYLEVYGNLINSDVGVSHKKEKAYTNRNLKIYEKH 184 Query: 182 AAAGEAFSPRDQYYYANELRDHGMHEEACRYYTLFLEGGQGWIEDNYQACLRLAECQERL 241 +G+ FSPRD YYYANE +DH + ++A + Y+ FL+ +GW+EDN QACL+ AEC L Sbjct: 185 LESGKEFSPRDVYYYANECKDHRLFDKAVKGYSRFLDEEKGWVEDNIQACLKRAECYLEL 244 Query: 242 GNREEAFQALCRTLKIDKPRAEFCCRLGAWHLEKNQLHQAVYWYELAVMLPRQNDSMGIR 301 G+ +++ Q+ ++ D PR E CC LG L++ + +A+YWY A+ PR DS +R Sbjct: 245 GDLKKSIQSCLQSFTYDTPRGELCCHLGRVFLQQGEYSKAIYWYHAAIDGPRPKDSPFVR 304 Query: 302 NESYSTWLPNLQLALCYDRLGQHEKANLFNETALRYHPAHPSMLYNRNYFKTL 354 E + TWLP++QL +CYDR+ ++EKA NE A + P +PS+ YNR YF +L Sbjct: 305 EECH-TWLPHIQLCICYDRIKEYEKAIYHNEQAALFIPNNPSIEYNRKYFDSL 356 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.135 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,271,699,947 Number of extensions: 93881451 Number of successful extensions: 207363 Number of sequences better than 1.0e-05: 774 Number of HSP's gapped: 207766 Number of HSP's successfully gapped: 786 Length of query: 370 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 233 Effective length of database: 1,770,017,148 Effective search space: 412413995484 Effective search space used: 412413995484 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)