BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0014.p (197 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q46C96.1 Q46C96_METBF Antibiotic resistance protein 208 2e-52 Q8TRH3.1 Q8TRH3_METAC Antibiotic resistance protein 206 8e-52 B9DYQ0.1 B9DYQ0_CLOK1 Putative uncharacterized protein 177 3e-43 A5N547.1 A5N547_CLOK5 Putative uncharacterized protein 177 3e-43 C0Z6G1.1 C0Z6G1_BREBN Putative uncharacterized protein 164 3e-39 >Q46C96.1 Q46C96_METBF Antibiotic resistance protein Length = 177 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 92/165 (55%), Positives = 122/165 (73%) Query: 31 LEHVSYKLRECQDQERIGAFLSVSRTGIVGIGGDTYPYAVPVNYVWHQGSIYFHGMGSGK 90 ++ V Y R+C D+E+I FL RTG++G+ +PYAVP NYVWH+GS+YFHGMGSGK Sbjct: 1 MDQVRYTQRDCTDKEKIENFLLQERTGVLGMVNGNFPYAVPTNYVWHKGSVYFHGMGSGK 60 Query: 91 KVRLLAEHPAVSFTVYREDCTVTDPVPCKADTAYFSVMLFGEAIRVTDMGEAAGVLQKIL 150 K +L++ P V FT+Y+E TV DPVPC DTAY SVMLFG+A +VTD EAA LQK++ Sbjct: 61 KEDILSQSPPVCFTIYQEHGTVIDPVPCHVDTAYMSVMLFGKAEKVTDFEEAAEALQKLV 120 Query: 151 DKYTPGFYKQELSARMVEKYRSSMDGNGAAVYRLTPVHLTAKENA 195 DKY P +Y L++ +EKYRSS+D N +VY++TP +TAKEN+ Sbjct: 121 DKYMPEYYSNSLTSNFIEKYRSSLDENPVSVYKITPQGMTAKENS 165 >Q8TRH3.1 Q8TRH3_METAC Antibiotic resistance protein Length = 177 Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 92/165 (55%), Positives = 122/165 (73%) Query: 31 LEHVSYKLRECQDQERIGAFLSVSRTGIVGIGGDTYPYAVPVNYVWHQGSIYFHGMGSGK 90 ++ V Y R C D+E+I +FL RTG++G+ +PYAVP+NYVWH+GS+Y HGMGSGK Sbjct: 1 MDQVRYTQRNCTDKEKIESFLLQERTGVLGMVNGIFPYAVPMNYVWHKGSVYLHGMGSGK 60 Query: 91 KVRLLAEHPAVSFTVYREDCTVTDPVPCKADTAYFSVMLFGEAIRVTDMGEAAGVLQKIL 150 K +L+ P V FT+Y+E TVTDPVPC ADTAY SVM+FG+A +V+D EAA L K++ Sbjct: 61 KEEILSRSPPVCFTIYKEHGTVTDPVPCHADTAYMSVMIFGKAEKVSDQEEAAEALWKLV 120 Query: 151 DKYTPGFYKQELSARMVEKYRSSMDGNGAAVYRLTPVHLTAKENA 195 +KY PG+Y L+ VEKYRSS+D N +VYR+TP +TAKEN+ Sbjct: 121 NKYMPGYYNNPLTGTFVEKYRSSLDENPVSVYRITPQWMTAKENS 165 >B9DYQ0.1 B9DYQ0_CLOK1 Putative uncharacterized protein Length = 173 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 84/165 (50%), Positives = 112/165 (67%), Gaps = 1/165 (0%) Query: 31 LEHVSYKLRECQDQERIGAFLSVSRTGIVGI-GGDTYPYAVPVNYVWHQGSIYFHGMGSG 89 +E +SY R C D+ +I +FL+ R G++G+ + PY++PVNY++ G IY HGMGSG Sbjct: 1 MEEISYTARICSDERKINSFLTEKRVGVLGMCDKEGKPYSIPVNYIYEDGKIYIHGMGSG 60 Query: 90 KKVRLLAEHPAVSFTVYREDCTVTDPVPCKADTAYFSVMLFGEAIRVTDMGEAAGVLQKI 149 KK +L E +V FTV++E TV D VPCK DT+YFSV++FG+AI V D+ E A VL I Sbjct: 61 KKNNILKEKSSVCFTVFQEFGTVKDSVPCKCDTSYFSVVIFGKAILVEDLEEKARVLTLI 120 Query: 150 LDKYTPGFYKQELSARMVEKYRSSMDGNGAAVYRLTPVHLTAKEN 194 +K+ PGF K LS V KYRSS D N AVY ++P +TAKEN Sbjct: 121 AEKFVPGFLKNPLSKEFVSKYRSSRDNNTTAVYCISPEDITAKEN 165 >A5N547.1 A5N547_CLOK5 Putative uncharacterized protein Length = 173 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 84/165 (50%), Positives = 112/165 (67%), Gaps = 1/165 (0%) Query: 31 LEHVSYKLRECQDQERIGAFLSVSRTGIVGI-GGDTYPYAVPVNYVWHQGSIYFHGMGSG 89 +E +SY R C D+ +I +FL+ R G++G+ + PY++PVNY++ G IY HGMGSG Sbjct: 1 MEEISYTARICSDERKINSFLTEKRVGVLGMCDKEGKPYSIPVNYIYEDGKIYIHGMGSG 60 Query: 90 KKVRLLAEHPAVSFTVYREDCTVTDPVPCKADTAYFSVMLFGEAIRVTDMGEAAGVLQKI 149 KK +L E +V FTV++E TV D VPCK DT+YFSV++FG+AI V D+ E A VL I Sbjct: 61 KKNNILKEKSSVCFTVFQEFGTVKDSVPCKCDTSYFSVVIFGKAILVEDLEEKARVLTLI 120 Query: 150 LDKYTPGFYKQELSARMVEKYRSSMDGNGAAVYRLTPVHLTAKEN 194 +K+ PGF K LS V KYRSS D N AVY ++P +TAKEN Sbjct: 121 AEKFVPGFLKNPLSKEFVSKYRSSRDNNTTAVYCISPEDITAKEN 165 >C0Z6G1.1 C0Z6G1_BREBN Putative uncharacterized protein Length = 178 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 76/165 (46%), Positives = 110/165 (66%) Query: 31 LEHVSYKLRECQDQERIGAFLSVSRTGIVGIGGDTYPYAVPVNYVWHQGSIYFHGMGSGK 90 ++ V YK+RE D+ +I FL +R G +G+ PY VP+N+VW G +YFHG G+ Sbjct: 1 MDGVRYKMREVLDKSKIETFLQQARIGHLGMVDGHLPYVVPLNFVWTNGKLYFHGATGGR 60 Query: 91 KVRLLAEHPAVSFTVYREDCTVTDPVPCKADTAYFSVMLFGEAIRVTDMGEAAGVLQKIL 150 + +++ +P V FTV E T+TDPVP K DTAY SVM+FG+A + D+ EA +LQ+++ Sbjct: 61 RNQVVDANPEVCFTVCEEYGTITDPVPAKTDTAYMSVMIFGKAEPIVDLDEATHMLQEMM 120 Query: 151 DKYTPGFYKQELSARMVEKYRSSMDGNGAAVYRLTPVHLTAKENA 195 +KY PG+Y + L + VEKYRS++ G VYR+ P H+TAKEN Sbjct: 121 NKYVPGYYNRPLPKQHVEKYRSAVFGGPVQVYRIDPQHITAKENP 165 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,226,440,245 Number of extensions: 50617252 Number of successful extensions: 102678 Number of sequences better than 1.0e-05: 181 Number of HSP's gapped: 102616 Number of HSP's successfully gapped: 181 Length of query: 197 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 68 Effective length of database: 1,845,385,268 Effective search space: 125486198224 Effective search space used: 125486198224 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)