BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0037.p (378 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B7R6K9.1 B7R6K9_9THEO Putative uncharacterized protein 223 2e-56 Q8RBH1.1 Q8RBH1_THETN Putative uncharacterized protein 223 3e-56 B0KAK1.1 B0KAK1_THEP3 Putative uncharacterized protein 215 5e-54 B0K4G7.1 B0K4G7_THEPX Putative uncharacterized protein 213 2e-53 A5D4V6.1 A5D4V6_PELTS Hypothetical membrane protein 196 3e-48 >B7R6K9.1 B7R6K9_9THEO Putative uncharacterized protein Length = 382 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 132/377 (35%), Positives = 183/377 (48%), Gaps = 21/377 (5%) Query: 12 VIFLLVSFQFSAE---RAAADPSASDHELKSELENIYAERAKILINGNTGRLEKRYLMEQ 68 VIFL + FS R S E+K+ L+ + +R K L+N + +E Y Sbjct: 13 VIFLALLSYFSINFFNRTIEATSNGKEEVKAVLDEFFKQRGKALLNQDLREIEYFYDKSS 72 Query: 69 ALSKNAFQHXXXXXXXXXXXXXAWADKRNIKLIHADXXXXXXXXXXXGDTAKVSLVQSLK 128 K A H W++KRN+K A+ ++ V ++++K Sbjct: 73 TYGKWALDHEKRRIEYVK----GWSEKRNLKFTEAESFYRIKNIKAGENSIWVYAIETMK 128 Query: 129 IAYVYNNKIIPEQFFGVGTRHFMTLKKSNGNWKIAREWYLDPLDENPHKIAEKP-EGAAP 187 + Y YN K G+G RH + L K +G W I R+WY DPLDE+ I P EG P Sbjct: 129 MGYAYNAKSDVINLMGLGIRHSIQLVKVDGKWLIRRDWYYDPLDEDSAYIDASPAEGIIP 188 Query: 188 SDKPKSEPNEDK--------KFXXXXXXXXXXXXXXXXXXXXXQHHYNKKYLDYTGKGGD 239 P S P E+ K+ + YN KY DY G GGD Sbjct: 189 EAAPTSTPQEEMEQKPKKKGKYDREGAVAYADKYAGAAWGSGNNYEYNPKYKDYYGVGGD 248 Query: 240 CTNFASQVIGDPEEGGGLQMQGGWRYFYKSGGTQTWVQTDSFSRFLLRSGYGKMIAKGDY 299 CTNF SQV+ EGGGL M W +F + W Q + +L+ +G GK+IAKG Y Sbjct: 249 CTNFVSQVL---HEGGGLPMDNVW-FFNGKDASTAWAQAPALFNYLIYTGKGKLIAKGHY 304 Query: 300 QQIMSPSKKYPGGAVSELQPGDLVGYILRHDDTDHFSVIVGFDDSGYPLVNSHTADRYRV 359 ++ P+++YP GA+ L+ GDL+ Y + HF+V+ GFD G P+VN+HT+DRY V Sbjct: 305 LDMVKPTEQYPQGAIRALEKGDLICY-EEKGEIVHFAVVTGFDSMGIPVVNTHTSDRYHV 363 Query: 360 PFDLGWDKDTKYQLFHI 376 PFDLGWDK Y+ HI Sbjct: 364 PFDLGWDKRVVYRFIHI 380 >Q8RBH1.1 Q8RBH1_THETN Putative uncharacterized protein Length = 382 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 132/377 (35%), Positives = 183/377 (48%), Gaps = 21/377 (5%) Query: 12 VIFLLVSFQFSAE---RAAADPSASDHELKSELENIYAERAKILINGNTGRLEKRYLMEQ 68 VIFL + FS R S E+K+ L+ + +R K L+N + +E Y Sbjct: 13 VIFLALLSYFSINFFNRTIEATSNGKEEVKAVLDEFFKQRGKALLNQDLREIEYFYDKSS 72 Query: 69 ALSKNAFQHXXXXXXXXXXXXXAWADKRNIKLIHADXXXXXXXXXXXGDTAKVSLVQSLK 128 K A H W++KRN+K A+ ++ V ++++K Sbjct: 73 TYGKWALDHEKRRIEYVK----GWSEKRNLKFTEAESFYRIKNIKAGENSIWVYAIETMK 128 Query: 129 IAYVYNNKIIPEQFFGVGTRHFMTLKKSNGNWKIAREWYLDPLDENPHKIAEKP-EGAAP 187 + Y YN K G+G RH + L K +G W I R+WY DPLDE+ I P EG P Sbjct: 129 MGYAYNAKSDVVNLMGLGIRHSIQLVKVDGKWLIRRDWYYDPLDEDSAYIDASPAEGIIP 188 Query: 188 SDKPKSEPNEDK--------KFXXXXXXXXXXXXXXXXXXXXXQHHYNKKYLDYTGKGGD 239 P S P E+ K+ + YN KY DY G GGD Sbjct: 189 EAAPTSIPQEEMEQKPKKKGKYDREGAVAYADKYAGAAWGSGNNYEYNPKYKDYYGVGGD 248 Query: 240 CTNFASQVIGDPEEGGGLQMQGGWRYFYKSGGTQTWVQTDSFSRFLLRSGYGKMIAKGDY 299 CTNF SQV+ EGGGL M W +F + W Q + +L+ +G GK+IAKG Y Sbjct: 249 CTNFVSQVL---HEGGGLPMDNVW-FFNGKDASTAWAQAPALFNYLIYTGKGKLIAKGHY 304 Query: 300 QQIMSPSKKYPGGAVSELQPGDLVGYILRHDDTDHFSVIVGFDDSGYPLVNSHTADRYRV 359 ++ P+++YP GA+ L+ GDL+ Y + HF+V+ GFD G P+VN+HT+DRY V Sbjct: 305 LDMVKPTEQYPQGAIRALEKGDLICY-EEKGEIVHFAVVTGFDSMGIPVVNTHTSDRYHV 363 Query: 360 PFDLGWDKDTKYQLFHI 376 PFDLGWDK Y+ HI Sbjct: 364 PFDLGWDKRVVYRFIHI 380 >B0KAK1.1 B0KAK1_THEP3 Putative uncharacterized protein Length = 383 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 126/382 (32%), Positives = 190/382 (49%), Gaps = 22/382 (5%) Query: 5 CLISXXXVIFLLVSFQFSAERAAADPSASDHELKSELENIYAERAKILINGNTGRLEKRY 64 L++ + + +SF + +D + E+K L+ + R +L++G+ +E Y Sbjct: 12 LLLALIFLTYFSISFFNKTVQTTSD---NKEEIKPVLDEFFKRRGSVLLSGDLTEIEGFY 68 Query: 65 LMEQALSKNAFQHXXXXXXXXXXXXXAWADKRNIKLIHADXXXXXXXXXXXGDTAKVSLV 124 + A H W++KRN+K A+ ++ V LV Sbjct: 69 DKSSTYGRWALDHERRRIEYVK----GWSEKRNLKFTEAESFYRIKSIKAGENSIWVYLV 124 Query: 125 QSLKIAYVYNNKIIPEQFFGVGTRHFMTLKKSNGNWKIAREWYLDPLDENPHKIAEKP-E 183 +++K+ Y YN K + G+G RH + L K +G W I R+WY DPLDE+ I P + Sbjct: 125 ETMKMGYAYNVKSNIINYMGLGIRHSIQLVKVDGKWLIRRDWYYDPLDEDSAYIDAAPAD 184 Query: 184 GAAPS-----DKPKSE----PNEDKKFXXXXXXXXXXXXXXXXXXXXXQHHYNKKYLDYT 234 G P KP++E P + K+ + YN KY DY Sbjct: 185 GILPEITSTVSKPQTEEEAKPKKKGKYDREGAVAYADKYAGAAWGSGNNYEYNPKYRDYN 244 Query: 235 GKGGDCTNFASQVIGDPEEGGGLQMQGGWRYFYKSGGTQTWVQTDSFSRFLLRSGYGKMI 294 G GGDCTNF SQV+ EGGGL M W +F + W Q + +L+ +G GK+I Sbjct: 245 GIGGDCTNFVSQVL---HEGGGLPMDYVW-FFDGKDSSTAWAQAPALFNYLIYTGKGKLI 300 Query: 295 AKGDYQQIMSPSKKYPGGAVSELQPGDLVGYILRHDDTDHFSVIVGFDDSGYPLVNSHTA 354 AKG Y ++ P++++P GA++E++ GDL+ Y + HF V+ GFD G P+VN+HT+ Sbjct: 301 AKGYYIDMVKPTEQHPKGAIAEIEKGDLICY-EEKGEIVHFGVVTGFDSMGIPVVNTHTS 359 Query: 355 DRYRVPFDLGWDKDTKYQLFHI 376 DRY VPFDLGWDK Y+ HI Sbjct: 360 DRYHVPFDLGWDKRVIYRFIHI 381 >B0K4G7.1 B0K4G7_THEPX Putative uncharacterized protein Length = 383 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 125/382 (32%), Positives = 190/382 (49%), Gaps = 22/382 (5%) Query: 5 CLISXXXVIFLLVSFQFSAERAAADPSASDHELKSELENIYAERAKILINGNTGRLEKRY 64 L++ + + +SF + +D + E+K L+ + R +L++G+ +E Y Sbjct: 12 LLLALIFLTYFSISFFNKTVQTTSD---NKEEIKPVLDEFFKRRGSVLLSGDLTEIEGFY 68 Query: 65 LMEQALSKNAFQHXXXXXXXXXXXXXAWADKRNIKLIHADXXXXXXXXXXXGDTAKVSLV 124 + A H W++KRN+K A+ ++ V LV Sbjct: 69 DKSSTYGRWALDHERRRIEYVK----GWSEKRNLKFTEAESFYRIKSIKAGENSIWVYLV 124 Query: 125 QSLKIAYVYNNKIIPEQFFGVGTRHFMTLKKSNGNWKIAREWYLDPLDENPHKIAEKP-E 183 +++K+ Y YN K + G+G RH + L K +G W I R+WY DPLDE+ I P + Sbjct: 125 ETMKMGYAYNVKSNIINYMGLGIRHSIQLVKVDGKWLIRRDWYYDPLDEDSAYIDAAPAD 184 Query: 184 GAAPS-----DKPKSE----PNEDKKFXXXXXXXXXXXXXXXXXXXXXQHHYNKKYLDYT 234 G P KP++E P + K+ + YN KY DY Sbjct: 185 GILPEITSTVSKPQTEEEAKPKKKGKYDREGAVAYADKYAGAAWGSGNNYEYNPKYRDYN 244 Query: 235 GKGGDCTNFASQVIGDPEEGGGLQMQGGWRYFYKSGGTQTWVQTDSFSRFLLRSGYGKMI 294 G GGDCTNF SQV+ EGGGL M W +F + W Q + +L+ +G GK+I Sbjct: 245 GIGGDCTNFVSQVL---HEGGGLPMDYVW-FFDGKDSSTAWAQAPALFNYLIYTGKGKLI 300 Query: 295 AKGDYQQIMSPSKKYPGGAVSELQPGDLVGYILRHDDTDHFSVIVGFDDSGYPLVNSHTA 354 AKG Y ++ P++++P GA+++++ GDL+ Y + HF V+ GFD G P+VN+HT+ Sbjct: 301 AKGYYIDMVKPTEQHPKGAIAKIEKGDLICY-EEKGEIVHFGVVTGFDSMGIPVVNTHTS 359 Query: 355 DRYRVPFDLGWDKDTKYQLFHI 376 DRY VPFDLGWDK Y+ HI Sbjct: 360 DRYHVPFDLGWDKRVIYRFIHI 381 >A5D4V6.1 A5D4V6_PELTS Hypothetical membrane protein Length = 380 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 120/376 (31%), Positives = 194/376 (51%), Gaps = 19/376 (5%) Query: 12 VIFLLV----SFQFSAERAAADPSASDHELKSELENIYAERAK-ILINGNTGRLEKRYLM 66 +FL++ + S +AA PS ++EL + I+ RA+ I+ + + Y Sbjct: 9 ALFLILVAAGGLKASCCKAAGKPSL-NNELLARAGEIFTARARAIITDADPAPALACYDT 67 Query: 67 EQALSKNAFQHXXXXXXXXXXXXXAWADKRNIKLIHADXXXXXXXXXXXGDTAKVSLVQS 126 L + A H WA KR +++ A G+TA++ + Q+ Sbjct: 68 SGLLGRWALAHEQARLNYIQL----WAKKRGVRITEAGSSLRIPWLQVQGNTAELVVHQT 123 Query: 127 LKIAYVYNNKIIPEQFFGVGTRHFMTLKKSNGNWKIAREWYLDPLDENPHKIAEKP-EGA 185 L++ YVY + +FG+GTRH+M L +G W I +++Y+D L EN P +G+ Sbjct: 124 LQLGYVYPDDPY-VNYFGIGTRHWMKLALKDGRWLIQQDFYIDGLGENLSSPDPTPADGS 182 Query: 186 A----PSDKPKSEPNEDKKFXXXXXXXXXXXXXXXXXXXXXQHHYNKKYLDYTGKGGDCT 241 A P P ++ ++ + H+YN +Y ++ +GGDCT Sbjct: 183 ALIGVPDKSPPAQGDQPVIYDREGAVRYADEYAGLAWGAGNDHNYNPRYRNFNDRGGDCT 242 Query: 242 NFASQVIGDPEEGGGLQMQGGWRYFYK-SGGTQTWVQTDSFSRFLLRSGYGKMIAKGDYQ 300 NF SQ +GD +GG + M G W Y Y+ + G+Q WV+ +SF +L+ SG G+ IA G + Sbjct: 243 NFVSQCLGD-AQGGKIPMDGIWYYDYRENSGSQAWVRAESFGDWLVYSGRGRRIAGGTFP 301 Query: 301 QIMSPSKKYPGGAVSELQPGDLVGYILRHDDTDHFSVIVGFDDSGYPLVNSHTADRYRVP 360 ++ PS +P GAV EL+ GD++GY R ++H +++VG D GYPLVN+H DR+ P Sbjct: 302 ELNQPSAAFPRGAVRELRIGDVIGYGKRA-YSEHLAIVVGHDSKGYPLVNAHNVDRFHCP 360 Query: 361 FDLGWDKDTKYQLFHI 376 +D+G DK T + L+ I Sbjct: 361 WDMGCDKTTFFHLYSI 376 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.136 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,181,206,076 Number of extensions: 91823901 Number of successful extensions: 201839 Number of sequences better than 1.0e-05: 56 Number of HSP's gapped: 201696 Number of HSP's successfully gapped: 65 Length of query: 378 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 241 Effective length of database: 1,770,017,148 Effective search space: 426574132668 Effective search space used: 426574132668 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)