BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0033.p (617 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KCC9.1 B3KCC9_9BACI Putative uncharacterized protein 468 e-129 B1DLI1.1 B1DLI1_9BACL Putative uncharacterized protein 207 3e-51 C1QKP2.1 C1QKP2_CAPOC Putative uncharacterized protein 138 2e-30 B0P983.1 B0P983_9FIRM Putative uncharacterized protein 92 2e-16 A5TY26.1 A5TY26_FUSNP Putative uncharacterized protein 86 8e-15 >B3KCC9.1 B3KCC9_9BACI Putative uncharacterized protein Length = 618 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 283/627 (45%), Positives = 376/627 (59%), Gaps = 20/627 (3%) Query: 1 MSTALLQELHQEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERAAVFKRLGEGITSLVEP 60 MSTALLQEL+QEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERA VFKRLGEGI +L+EP Sbjct: 1 MSTALLQELNQEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERAPVFKRLGEGILALIEP 60 Query: 61 GAGDGAPAAVRXXXXXXXXXXXXXXXGVSTPDEAPGELRSRNFTLDTKLPYRKLAAVRQA 120 +G +A G + P+ + L + L YRKL+AV+ A Sbjct: 61 DSGKENQSAQLLQDLNQLLSSVLHTQGTTAPEGELFQADHHPVPLSSHLSYRKLSAVQTA 120 Query: 121 LTTTGSGRYEVVIEAFKEGVFQDLRLLPLAIAALNDPYSEIAEFAMNNILPAYGPAITGY 180 LTTTGSGRYE++ EA+KEGVF+D RL+ LAI ALNDPY EI E A N ILPAYGP I + Sbjct: 121 LTTTGSGRYEIIEEAWKEGVFRDFRLVYLAIEALNDPYVEIGELAANEILPAYGPEIVPF 180 Query: 181 LIESLNLTGGKSEVRKLKVIAKAGGTEALEKIFKAAEDGSDDIRAAAIECLGGHDAYLQD 240 L+ES N GGK E RKLKV+A AGG EALE I +AAE GSD++R AI+ L ++ + D Sbjct: 181 LMESFNPAGGKPESRKLKVMAAAGGKEALELIRQAAEIGSDEVRCMAIKLLAPYEEFEAD 240 Query: 241 LLEWSKDKKKVIREAAYKALATGGSSQGEDRLYEAFAGKKDRELAADALAHCSSAPLVER 300 L+EWS+ KKKVIREAAY ALA GS Q RLYEA G KD+EL AL C SA L + Sbjct: 241 LMEWSRSKKKVIREAAYGALAENGSDQAVGRLYEAAQG-KDKELVNPALGRCRSALLTDW 299 Query: 301 LSALYMQELRELPEKNEDKKKAEQLWNNIRPFTTVLYGQQNPQLDELYSYVIADHGRF-A 359 L EL+ + E DK+K E+ W ++ L+ +QNP+L+ELY V+ + + Sbjct: 300 LVRDLSAELQSVSESLGDKQKLEESWIKVKRCLWALHDKQNPELEELYRNVLQQYALYIK 359 Query: 360 SLGLVNVIDEAARYKVRAATESAYEELRK-----LEQL--ESRFFPYVFRAAQQLMSPEE 412 SLG +++EA Y R + A E LR+ LEQ + VF+ A +++ PE Sbjct: 360 SLGWTYLMNEAVIYMNRVDSGEARELLRQNAENDLEQYRHSGSYVREVFQKATRVLPPER 419 Query: 413 LYKQFGGTLINKLKAVVTRDSAQRNKMLMDTIKGQVMQAEEIWYDADWDPQRERQYR-ET 471 +Y+Q+ L+ + ++A+ K L+DT+ V+ + Y+ + Y Sbjct: 420 VYEQYKDVLLQGFASSPLSNAAKERKKLLDTLSDLVITRQYKRYEEVMPFAGKESYTYYV 479 Query: 472 GMLAPDKIAAAWDPHWLDLFIHRDELELVCAFARPDHAEARRYLLNKLDERKESQHKQRN 531 ML +++ A WD WL+L I +DEL LV AFAR H +A YLL KL E +++ Sbjct: 480 EMLPQEQLLACWDDRWLELLIEQDELALVSAFARRGHRKAESYLLAKLQNSPEFRNR--- 536 Query: 532 HDFLPDIFTGLARSGMPDPELHELLISMLENGKSYLPYRFDYNLFQQMLRFPASYSGRLE 591 F I GL R+G+ D EL E +++ LE+ ++ Y + F Q+ R PA Y R+ Sbjct: 537 --FANLIIMGLVRTGIKDEELFEAVVAALEDKRNQDCYMIEPFTFSQLCRLPADYHDRVH 594 Query: 592 AVIPNQRYYESRA--QLEYVVHQLKSQ 616 AV+ N Y+ A QL Y++ ++K Q Sbjct: 595 AVLGN---YKDNAEDQLRYILRKMKEQ 618 >B1DLI1.1 B1DLI1_9BACL Putative uncharacterized protein Length = 602 Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 191/634 (30%), Positives = 295/634 (46%), Gaps = 73/634 (11%) Query: 1 MSTALLQELHQEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERAAVFKRLGEGITSLVEP 60 MS LL +L EVRRL+IAGS LA GD RL +LL Q+ GE A VFKRL + L++ Sbjct: 1 MSVDLLLDLQVEVRRLFIAGSTLAEGDIRLSKLLSSLQKAGEAAPVFKRLADTTEGLIQ- 59 Query: 61 GAGDGAPAAVRXXXXXXXXXXXXXXXGVSTPDEAPGELR---SRNFTLDTKLPYRKLAAV 117 AP A + GE + S +L T++ +R+L + Sbjct: 60 -----APRAESASKLLELATLLSAVLHTQGKTDIAGETQPVDSVGLSLPTEVTFRRLHPL 114 Query: 118 RQALTTTGSGRYEVVIEAFKEGVFQDLRLLPLAIAALNDPYSEIAEFAMNNILPAYGPAI 177 +ALTT GSGR E + +A+++ F DLR LP +AL+D YSEI EF ILP +G A Sbjct: 115 LEALTTKGSGRLEQIRQAYEDRSFLDLRALPALCSALDDVYSEIPEFIQQKILPEFGQAA 174 Query: 178 TGYLIESLNLTGGKSEVRKLKVIAKAGGTEALEKIFKAAEDGSDDIRAAAIECLGGHDAY 237 L LNL GGK + R+L+++ G +L + +A G+ +++ AAIE L G++ Sbjct: 175 VPLLQSQLNLQGGKGDARRLQLLHLLQGESSLGLVQEAGVSGAPELKIAAIELLSGYEGQ 234 Query: 238 LQDLLEWSKDKKKVIREAAYKALATGGSSQGEDRLYEAFAGKKDRELAADALAHCSSAPL 297 LLE S++K+K +REAAY ALA S +DRL EA KD EL + C++ L Sbjct: 235 EGFLLEQSREKRKEVREAAYYALARLASIPCQDRLLEAVTS-KDAELVIYPIRKCTALTL 293 Query: 298 VERLSALYMQELRELPEKNEDKKKA--EQLWNNIRPFTTVLYGQQNPQLDELYSYVIADH 355 +R+ A ++L K+A +QL+ ++R + +++ +A+ Sbjct: 294 HKRIIAHAEEQLDRYSAGEGKAKEAALQQLYTDLRCLNS-------------HAHELAEA 340 Query: 356 GRFASLGLVNVIDEAARYKVRAATESAYEELRKLEQLES-------------RFFPYVFR 402 F LG + DE ++A E L LE S +F Y FR Sbjct: 341 A-FPMLGRLMATDEFMTADAGGVQDTAAELLLALESEPSDRFAIGLHSAYKGKFIGYSFR 399 Query: 403 AAQQLMSPEELYKQFGGTLINKLKAVVTRDSAQRNKMLMDTIKGQVMQAEEIWYDADWDP 462 AA + +SP EL+ ++ + + + K+L I+ Q++ + D Sbjct: 400 AAFRQLSPAELFDRYADAI---------KGRSAPAKLLQQAIQ-QIVHEQLAGSD----- 444 Query: 463 QRERQYRETGMLAPDKIAAAWDPHWLDLFIHRDELELVCAFARPDHAEARRYLLNKL-DE 521 E P++ AWD W+ +D +LVC F + E YL++KL D Sbjct: 445 -------ERAEAVPEE---AWDRRWVKALAAQDLTDLVCVFTHQNDREVSSYLVSKLKDG 494 Query: 522 RKESQHKQRNHDFLPDIFTGLARSGMPDPELHELLISMLENGKSYLPYRFDYNLFQQMLR 581 + + ++ +N + L R G E EL + +LEN S Y D+ + Q Sbjct: 495 SRVNDYRTQN------VLLTLFRIGF--KEAPELFMGLLENKTSRSFYYIDWRMKQLFAS 546 Query: 582 FPASYSGRLEAVIPNQRYYESRAQLEYVVHQLKS 615 P +Y+ RL A Y + +L ++ L++ Sbjct: 547 MPKAYAPRLRAFAEALTYESVKNELLEIIEALEA 580 >C1QKP2.1 C1QKP2_CAPOC Putative uncharacterized protein Length = 608 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/293 (30%), Positives = 156/293 (53%), Gaps = 11/293 (3%) Query: 6 LQELHQEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERAAVFKRLGEGITSLVEPGAGDG 65 L +L QE+ RL+IAGS+ A D RL++ +P ++LGE+A VF +L + + +L++ + Sbjct: 4 LYDLQQELNRLFIAGSKFAKNDPRLQKYIPILKKLGEKAPVFNKLAQEVEALLQV---ES 60 Query: 66 APAAVRXXXXXXXXXXXXXXXGVSTPDEAPGELRSRNFTL---DTKLPYRKLAAVRQALT 122 +A + GV+ EA L+ N ++ +T Y +L V QALT Sbjct: 61 QQSAEKLLNVSTLLYSVLYTQGVTIQAEATKALQEPNVSIADVNTTYSYLQLKPVLQALT 120 Query: 123 TTGSGRYEVVIEAFKEGVFQDLRLLPLAIAALNDPYSEIAEFAMNNILPAYGPAITGYLI 182 + SGR EV+ +AF+ G+F+D R AL D Y+E+A++ + I+P G A+ +L+ Sbjct: 121 QSNSGRLEVLKDAFERGIFKDSRTFGYLSYALADKYTELADYVLQTIIPTCGQAMLPFLL 180 Query: 183 ESLNLTGGKSEVRKLKVIAKAGGTEALEKIFKAAEDGSDDIRAAAIECLG-GHDAYLQD- 240 L +R+L+++ + TE K + +++A AI + D +D Sbjct: 181 SDFRLEDRTENIRRLRLLYQLKYTEMDSLTDKIFSESLPNLQAEAISIIAEKKDTQTEDF 240 Query: 241 LLEWSKDKKKVIREAAYKALATGGSSQGEDR---LYEAFAGKKDRELAADALA 290 ++ + DK K++REA+YKALA G+ + D+ LYE K + + A+A++ Sbjct: 241 IMSLTGDKNKLVREASYKALAILGTQRSIDKLLALYETNKAKGNAKALAEAIS 293 >B0P983.1 B0P983_9FIRM Putative uncharacterized protein Length = 613 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 131/310 (42%), Gaps = 30/310 (9%) Query: 1 MSTALLQELHQEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERAAVFKRLGEGITSLVEP 60 M+ LL EL + + IAG + DFRL R L Q Q + V R+ + L +P Sbjct: 1 MALPLLNELQERLHACAIAGLNVIGEDFRLARALEQLAQAQASSPVLARIYQTAAPLADP 60 Query: 61 GAGDGAPAAVRXXXXXXXXXXXXXXXGVSTPDE-----APGELRSRNFTLDTKLPYRKLA 115 D A + GV E PG +D+ Y +L+ Sbjct: 61 ACADKASVLLDAITLVDAVVLTQAGCGVQGELEPMAAGCPG--------IDSGARYSELS 112 Query: 116 AVRQALTTTGSGRYEVVIEAFKEG--VFQDLRLLPLAIAALNDPYSEIAEFAMNNILPAY 173 A+ ALTT GSGRYE++ A E +D RL+ AL D YSEIA+ A + + Sbjct: 113 ALYTALTTRGSGRYEILRTALDENRPALRDFRLMEALAGALGDSYSEIADLAARIL--ST 170 Query: 174 GPAITGYLIESLNLTGGKSE-VRKLKVIAKAGGTEALEKIFKAAEDGSDDIRAAAIECLG 232 P L L+ K + VR++ +I A G + AE+GS I+ AA+ L Sbjct: 171 MPQAVPLLKRGLDPASKKKDMVRRIDIIQAAAGAHENALYLRLAEEGSTVIQEAAVRALR 230 Query: 233 GHDAYLQDLLEWSKDKKKVIREAAYKALATGGSSQGE----DRLYEAFAGK--------K 280 A + L+E+ K +R AA +AL+ Q + DRL A Sbjct: 231 HDPANIPLLIEYVGKAKGGVRSAALEALSQMRGGQVDAFWLDRLTAAGVSADTLKLVYGT 290 Query: 281 DRELAADALA 290 D +L +DA+A Sbjct: 291 DSDLVSDAVA 300 >A5TY26.1 A5TY26_FUSNP Putative uncharacterized protein Length = 636 Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 98/432 (22%), Positives = 178/432 (41%), Gaps = 35/432 (8%) Query: 1 MSTALLQELHQEVRRLYIAGSELAAGDFRLKRLLPQFQQLGERAAVFKRLGEGITSLVEP 60 M+ L EL + + + G L DFRLKR + Q ++ A VFK++ + SL+ Sbjct: 1 MNFETLYELKNRLENVAVVGINLVKDDFRLKRAVEQVKEYSTAAKVFKQIYDMGNSLIST 60 Query: 61 GAGDGAPAAVRXXXXXXXXXXXXXXXGVSTPDEAPGELRS--RNFTLDTKLPYRKLAAVR 118 D + + D+ P E+ + +N +L Y +L+ + Sbjct: 61 NDEDKCDLFLD---LLALLDAVLCTQATTYSDDKPQEINTIAKNKDYYKELHYSELSPLI 117 Query: 119 QALTTTGSGRYEVVIEAFKEG--VFQDLRLLPLAIAALNDPYSEIAEFAMNNILPAYGPA 176 A T TG GR ++I++FK + +D R+ I L+D YSEI++ M L G Sbjct: 118 YAFTETGGGRLNIIIDSFKTNPEIMKDFRVKTYMIHGLSDKYSEISD-RMVEELKKQGKE 176 Query: 177 ITGYLIESLNLTGGKSEVRKLKVIAKAGGTEALEKIFKAAEDGSDDIRAAAIECLGGHDA 236 + L + + G + + +L++IA E + E+GS +I+ AI L Sbjct: 177 VVPLLKDGFDPQGKREMISRLEIIASLCKEEENDLYKYCIENGSKEIKETAIGFLMYDQN 236 Query: 237 YLQDLLEWSKDKKKVIREAAYKALATGGSSQGEDRLYEAFAGKKDRELAADALAHCSSAP 296 + +L+ +K +K ++ A++AL+ S+ + GK ++ D + + Sbjct: 237 NIDYILDLTKTEKGKLKNKAFEALSYMSDSRAAEEW-----GKLLKKKPLDNIEYLRGTE 291 Query: 297 ---LVERLSALYMQELRELPEK----NEDKKKAEQLWNNIRPFTTVLYGQQNPQL---DE 346 ++ L+ M+ + E K E++KK E I PF +L + L E Sbjct: 292 QQWVINYLNDFIMEYIAETKSKILKTAEERKKVEYDILKISPF--ILKNRNEKTLLFCKE 349 Query: 347 LYSYVIADHGRFASLGLVNVIDEAARYKVRAATESAYEELRKLEQLESRFFPYVFRAAQQ 406 LY Y + R S + +++ ++ + ++ E F F + Sbjct: 350 LYPYNKYEIKRILSFYIAKDLNKEVIDTIKGLS----------KEYEGEFLQQEFLISLI 399 Query: 407 LMSPEELYKQFG 418 PE +YK F Sbjct: 400 KDKPETVYKNFS 411 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,593,295,218 Number of extensions: 151252787 Number of successful extensions: 388549 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 388540 Number of HSP's successfully gapped: 13 Length of query: 617 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 475 Effective length of database: 1,722,912,073 Effective search space: 818383234675 Effective search space used: 818383234675 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)