BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0028.p (232 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DLC1.1 B1DLC1_9BACL Aspartate-semialdehyde dehydrogenase EC=1.... 352 1e-95 A9KHE6.1 A9KHE6_CLOPH Aspartate-semialdehyde dehydrogenase EC=1.... 352 2e-95 B3K5U6.1 B3K5U6_9BACI Aspartate-semialdehyde dehydrogenase EC=1.... 352 2e-95 B6FSA3.1 B6FSA3_9CLOT Putative uncharacterized protein 344 3e-93 C0D089.1 C0D089_9CLOT Putative uncharacterized protein 343 8e-93 >B1DLC1.1 B1DLC1_9BACL Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 Length = 361 Score = 352 bits (903), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 172/215 (80%), Positives = 195/215 (90%) Query: 8 MSSKLRAGIVGGTGMVGQRFIALLENHPWFQVTAIAASANSAGKTYEESVKNRWKLSTPM 67 M+ KL+ GIVGGTGMVGQRF+ LL+ HPWF+VTAIAASA SAGKTY ESV+NRWKL TP+ Sbjct: 1 MTQKLKVGIVGGTGMVGQRFVQLLDQHPWFEVTAIAASAGSAGKTYVESVQNRWKLDTPI 60 Query: 68 PESVKSIMVQDASKVEEVAKDVDLIFCAVDMKKEEIKALEEAYARTGTPVISNNSAHRWT 127 PE+VK+I+VQDASKVEEVA VD +FCAVDM K+EI+ALEEAYA+TGTPV+SNNSAHRWT Sbjct: 61 PEAVKNIVVQDASKVEEVAAGVDFVFCAVDMPKKEIQALEEAYAKTGTPVVSNNSAHRWT 120 Query: 128 PDVPMVIPEINPEHLEVIAQQRKRLGTETGFIAVKPNCSIQSYMPTLHALQDFKPSKVVV 187 DVPMVIPEINPEHLEVI QRKRLGT TGFIAVKPNCSIQSY+P L+AL++FKP+ VV Sbjct: 121 ADVPMVIPEINPEHLEVIEAQRKRLGTTTGFIAVKPNCSIQSYVPALNALREFKPTTVVA 180 Query: 188 TTYQAISGAGKTFADWPEMVDNVIPYIGGEEEKSE 222 +TYQAISGAGK F DWP+M+DNVIPYIGGEEEKSE Sbjct: 181 STYQAISGAGKNFTDWPDMLDNVIPYIGGEEEKSE 215 >A9KHE6.1 A9KHE6_CLOPH Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 Length = 362 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 162/213 (76%), Positives = 189/213 (88%) Query: 10 SKLRAGIVGGTGMVGQRFIALLENHPWFQVTAIAASANSAGKTYEESVKNRWKLSTPMPE 69 SKLR GI+G TGMVGQRFI+LLENHPWF+VT +AAS SAGKTYEE+V NRWK+ TPMPE Sbjct: 2 SKLRVGILGATGMVGQRFISLLENHPWFEVTTLAASPRSAGKTYEEAVGNRWKMVTPMPE 61 Query: 70 SVKSIMVQDASKVEEVAKDVDLIFCAVDMKKEEIKALEEAYARTGTPVISNNSAHRWTPD 129 ++KS++V++ ++VE VA +VD +F AVDM K+EIKA+EEAYA+T TPV+SNNSAHRWTPD Sbjct: 62 AMKSLIVKNVNEVEAVASEVDFVFSAVDMTKDEIKAIEEAYAKTETPVVSNNSAHRWTPD 121 Query: 130 VPMVIPEINPEHLEVIAQQRKRLGTETGFIAVKPNCSIQSYMPTLHALQDFKPSKVVVTT 189 VPMVIPE+NPEH EVIA QRKRLGT+ GFIAVKPNCSIQSY P L+AL+++ P VV TT Sbjct: 122 VPMVIPEVNPEHFEVIASQRKRLGTKRGFIAVKPNCSIQSYTPALNALKEYGPKVVVATT 181 Query: 190 YQAISGAGKTFADWPEMVDNVIPYIGGEEEKSE 222 YQAISGAGK FADWPEMVDNVIP+IGGEEEKSE Sbjct: 182 YQAISGAGKNFADWPEMVDNVIPFIGGEEEKSE 214 >B3K5U6.1 B3K5U6_9BACI Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 Length = 347 Score = 352 bits (902), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 162/201 (80%), Positives = 182/201 (90%) Query: 22 MVGQRFIALLENHPWFQVTAIAASANSAGKTYEESVKNRWKLSTPMPESVKSIMVQDASK 81 MVGQRF+ LL+ HPWF+VT IAAS NSAGKTYEESV+ RWKL+TP+PE VK I+VQDAS+ Sbjct: 1 MVGQRFMQLLDGHPWFEVTTIAASRNSAGKTYEESVQGRWKLATPIPEQVKGIVVQDASQ 60 Query: 82 VEEVAKDVDLIFCAVDMKKEEIKALEEAYARTGTPVISNNSAHRWTPDVPMVIPEINPEH 141 VE+VA +VD +FCAVDMKK EI+ALEEAYA+TGTPVISNNSAHRWTPDVPMVIPEINP H Sbjct: 61 VEQVAAEVDFVFCAVDMKKNEIQALEEAYAKTGTPVISNNSAHRWTPDVPMVIPEINPGH 120 Query: 142 LEVIAQQRKRLGTETGFIAVKPNCSIQSYMPTLHALQDFKPSKVVVTTYQAISGAGKTFA 201 ++VIA QRKRLGT TGFIAVKPNCSIQSY+P LHAL DFKP+ VV +TYQAISGAGK F Sbjct: 121 IDVIAAQRKRLGTTTGFIAVKPNCSIQSYVPALHALLDFKPTNVVASTYQAISGAGKNFT 180 Query: 202 DWPEMVDNVIPYIGGEEEKSE 222 DWP+M+DNVIPYIGGEEEKSE Sbjct: 181 DWPDMLDNVIPYIGGEEEKSE 201 >B6FSA3.1 B6FSA3_9CLOT Putative uncharacterized protein Length = 401 Score = 344 bits (883), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 158/221 (71%), Positives = 191/221 (86%), Gaps = 1/221 (0%) Query: 3 GNE-MLMSSKLRAGIVGGTGMVGQRFIALLENHPWFQVTAIAASANSAGKTYEESVKNRW 61 GNE ++M KLR GI+G TGMVGQRFI+LLENHPW++V +AAS SAGKTYEE+V +RW Sbjct: 35 GNEEIIMEQKLRVGILGATGMVGQRFISLLENHPWYEVVTVAASPRSAGKTYEEAVGDRW 94 Query: 62 KLSTPMPESVKSIMVQDASKVEEVAKDVDLIFCAVDMKKEEIKALEEAYARTGTPVISNN 121 K+ TPMPE+VK ++V + ++VE+VA DVD +F AVDM KEEIKA+E+AYA+T TPV+SNN Sbjct: 95 KMKTPMPEAVKKLVVANVNEVEKVAADVDFVFSAVDMTKEEIKAIEDAYAKTETPVVSNN 154 Query: 122 SAHRWTPDVPMVIPEINPEHLEVIAQQRKRLGTETGFIAVKPNCSIQSYMPTLHALQDFK 181 SAHRWT DVPMV+PEINPEH EVI Q+KRLGTE GF+AVKPNCSIQSY P L A ++F+ Sbjct: 155 SAHRWTKDVPMVVPEINPEHFEVIEAQKKRLGTERGFVAVKPNCSIQSYAPVLTAWKEFE 214 Query: 182 PSKVVVTTYQAISGAGKTFADWPEMVDNVIPYIGGEEEKSE 222 P++VV TTYQAISGAGKTF DWPEMV+N+IP+IGGEEEKSE Sbjct: 215 PTEVVATTYQAISGAGKTFKDWPEMVENIIPFIGGEEEKSE 255 >C0D089.1 C0D089_9CLOT Putative uncharacterized protein Length = 361 Score = 343 bits (879), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 158/215 (73%), Positives = 185/215 (86%) Query: 8 MSSKLRAGIVGGTGMVGQRFIALLENHPWFQVTAIAASANSAGKTYEESVKNRWKLSTPM 67 M KL+ G++G TGMVGQRFI+LLENHPWF+V +AAS SAGKTYEE+V RWK+STPM Sbjct: 1 MEKKLKVGVLGATGMVGQRFISLLENHPWFEVVTVAASPRSAGKTYEEAVGGRWKMSTPM 60 Query: 68 PESVKSIMVQDASKVEEVAKDVDLIFCAVDMKKEEIKALEEAYARTGTPVISNNSAHRWT 127 PESVK ++V + ++VE+VA VD +F AVDM K+EIKA+EEAYART TPV+SNNSAHRWT Sbjct: 61 PESVKQMVVMNVNEVEKVAAGVDFVFSAVDMTKDEIKAIEEAYARTETPVVSNNSAHRWT 120 Query: 128 PDVPMVIPEINPEHLEVIAQQRKRLGTETGFIAVKPNCSIQSYMPTLHALQDFKPSKVVV 187 PDVPMV+PEINPEH EVI QR+RLGT+ GFIAVKPNCSIQSY P L A ++F+P +VV Sbjct: 121 PDVPMVVPEINPEHFEVIRYQRERLGTKRGFIAVKPNCSIQSYAPVLTAWKEFEPYEVVA 180 Query: 188 TTYQAISGAGKTFADWPEMVDNVIPYIGGEEEKSE 222 TTYQAISGAGKTF DWPEMV+N+IPYIGGEEEKSE Sbjct: 181 TTYQAISGAGKTFKDWPEMVENIIPYIGGEEEKSE 215 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.130 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,346,221,981 Number of extensions: 52479615 Number of successful extensions: 117687 Number of sequences better than 1.0e-05: 1346 Number of HSP's gapped: 115643 Number of HSP's successfully gapped: 1346 Length of query: 232 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 101 Effective length of database: 1,826,543,238 Effective search space: 184480867038 Effective search space used: 184480867038 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 129 (54.3 bits)