BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0023.p (605 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D7Z4.1 B1D7Z4_9BACL ABC transporter related 807 0.0 Q24Y93.1 Q24Y93_DESHY Putative uncharacterized protein 528 e-148 B8FT96.1 B8FT96_DESHD ABC transporter related 528 e-148 C4CFM6.1 C4CFM6_9ACTN ABC-type multidrug transport system, ATPas... 520 e-145 C4CKG4.1 C4CKG4_9CHLR ABC-type multidrug transport system, ATPas... 491 e-136 >B1D7Z4.1 B1D7Z4_9BACL ABC transporter related Length = 597 Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/591 (67%), Positives = 477/591 (80%), Gaps = 1/591 (0%) Query: 10 GHGRLKFDDDDKKTNLSKALLLRIAGYFFPYWKQTLLVMAVLIVSAVLGLLPPLFIQQII 69 G ++KFDD K N++KA+L+RI+ YF PYWKQT++V+ +L++S+ LGLLPP+FIQ I+ Sbjct: 2 GFNKMKFDDG-AKPNITKAMLVRISAYFVPYWKQTVVVLFILLLSSGLGLLPPIFIQHIV 60 Query: 70 DQALPDKNFRXXXXXXXXXXXXXXXXGLLGVLQNYLNSFISLHIVYDMKNQMYRHLQKMQ 129 D ALP+K+ R LLGVLQ+YLNS+IS +IVYDMKNQMYRHLQKM Sbjct: 61 DDALPNKDMRLLVELVLISLAATVASSLLGVLQSYLNSYISQNIVYDMKNQMYRHLQKMP 120 Query: 130 LQFYSGVQQGEVITRMTSDISGVQGVFSSTVVNFASNLFILVSTAVTLFIMNWKLALLGI 189 LQFYS V+QGEVITRMTSDISG+QGVF+STVVNFASNLFIL +T TLF+MNWKLA+LG+ Sbjct: 121 LQFYSNVKQGEVITRMTSDISGIQGVFNSTVVNFASNLFILATTLGTLFVMNWKLAILGM 180 Query: 190 FVIPLFVVPTRKMGNLSWKLAKQTQEKISEQNQIIQETLSISGYLLMKLFTKESAEYTKF 249 V+PLF+ PTRKMG + WK+AK+TQEK+SEQN IIQETLSISGYLLMKLFTKE EY F Sbjct: 181 VVVPLFLFPTRKMGRVRWKIAKETQEKMSEQNHIIQETLSISGYLLMKLFTKERKEYEGF 240 Query: 250 QTVNSEATSLQIRQSMAGRWFMMVLSTFTSXXXXXXXXXXXXXXXHGELSIGAIVAFVAL 309 + VN+E+T LQIR+SMAGRWFMM+LSTFT+ GE+S+G I++FVAL Sbjct: 241 KAVNAESTRLQIRESMAGRWFMMLLSTFTTIGPMLIYLYGGYLYIQGEISVGEIISFVAL 300 Query: 310 LGRLYGPVMQMTNLYVEIKRSAALFERIFDYFDMKPLIVDKPEARFISAAGRDITFHEVS 369 LGR+YGP QMTNLYV+I RS ALFERIFDYFDM+P+IV+KPEA +G+DI F +VS Sbjct: 301 LGRIYGPFGQMTNLYVDINRSIALFERIFDYFDMEPVIVNKPEALPADISGQDIEFVDVS 360 Query: 370 FAYQADKTALHGISFXXXXXXXXXXVGPSGAGKTTITNLIPRLYETDSGAITIGGSNIRD 429 FAY DK AL ISF VGPSGAGKTTITNL+PRLYE SG I IGG++I+D Sbjct: 361 FAYLKDKPALRNISFTAESGTMTALVGPSGAGKTTITNLLPRLYERSSGRIRIGGTDIKD 420 Query: 430 FTLESLRAQIGLVTQDTYLFNGTIRENLIYADPGASEDRIIAVCQAAYIHDFIMSLPEGY 489 TLESLR+QIGLVTQD+YLFNGTIRENL+YA+ ASE+ + C+AAYIH+FIM LP+GY Sbjct: 421 MTLESLRSQIGLVTQDSYLFNGTIRENLMYANDEASEEEMRVACKAAYIHEFIMELPDGY 480 Query: 490 DTVVGNRGVKLSGGEKQRISIARVLLKNPPVIIMDEATSSLDTASEYYIQQAMHTLLQGK 549 DTVVGNRG+KLSGGEKQRISIARVLLK+P +II+DEATSSLDT SEYYIQ+AM LLQ K Sbjct: 481 DTVVGNRGMKLSGGEKQRISIARVLLKDPAIIILDEATSSLDTVSEYYIQKAMSVLLQNK 540 Query: 550 TSIVIAHRLSTIMAADQILVVQAGTIVEAGTHQSLLEQHGVYRDLYDKQYE 600 TSIVIAHRLSTIMA+DQILVVQ G IVE G H+ LL Q+GVY+DL+ KQ+E Sbjct: 541 TSIVIAHRLSTIMASDQILVVQDGAIVEKGRHEELLLQNGVYKDLHAKQFE 591 >Q24Y93.1 Q24Y93_DESHY Putative uncharacterized protein Length = 611 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 281/586 (47%), Positives = 381/586 (65%), Gaps = 3/586 (0%) Query: 17 DDDDKKTNLSKALLLRIAGYFFPYWKQTLLVMAVLIVSAVLGLLPPLFIQQIIDQALPDK 76 ++ K ++KA L RI Y PYW + LV A +I+S++LGLLPPL +IID L + Sbjct: 18 EEKQNKPKVTKAFLRRILSYLLPYWPRLALVFAAIILSSLLGLLPPLLSGRIIDDGLLGR 77 Query: 77 NFRXXXXXXXXXXXXXXXXGLLGVLQNYLNSFISLHIVYDMKNQMYRHLQKMQLQFYSGV 136 +F L+ VL+NYL ++++ HI+YDMKNQMY HLQ+M +F++ Sbjct: 78 DFPLLVQLILLSFIVLIIANLINVLENYLTTWVAQHIIYDMKNQMYDHLQQMSHRFFTNN 137 Query: 137 QQGEVITRMTSDISGVQGVFSSTVVNFASNLFILVSTAVTLFIMNWKLALLGIFVIPLFV 196 QG++ITRMT+DI+GVQ V T+ SN ILV+T L NW LAL+ + ++PLF+ Sbjct: 138 HQGDIITRMTTDINGVQSVVVGTLTRLVSNTIILVTTFAALVQKNWLLALISMIIVPLFI 197 Query: 197 VPTRKMGNLSWKLAKQTQEKISEQNQIIQETLSISGYLLMKLFTKESAEYTKFQTVNSEA 256 +PT ++GN W L QE+ NQ+ ETLS+SG LL+KLFT+ES EY KF+ +N E Sbjct: 198 LPTNQVGNRRWSLTMAKQEQTDASNQLFNETLSVSGQLLVKLFTRESKEYAKFEKINREI 257 Query: 257 TSLQIRQSMAGRWFMMVLSTFTSXXXXXXXXX--XXXXXXHGELSIGAIVAFVALLGRLY 314 T L IR+ + GRWF ++ TFT+ L++G I VALLGRLY Sbjct: 258 TRLSIREILVGRWFRVIFDTFTNMGPMIIYLAGGFLMIKMGSGLTVGDITVVVALLGRLY 317 Query: 315 GPVMQMTNLYVEIKRSAALFERIFDYFDMKPLIVDKPEARFISAAGRDITFHEVSFAYQA 374 PV + + V+I RS ALF RIF+YFD+ I + P+A I F VSF Y+ Sbjct: 318 LPVNVLLTIQVDIIRSLALFSRIFEYFDIPVEIKNSPQAIVPKECAGTIVFEHVSFHYEG 377 Query: 375 DKTALHGISFXXXXXXXXXXVGPSGAGKTTITNLIPRLYETDSGAITIGGSNIRDFTLES 434 K L I+ VGPSG GKTT+ NLIPRLY+ G + + G ++RD L Sbjct: 378 -KPVLKNINLTIEKGKSVAIVGPSGTGKTTLINLIPRLYDVTGGRVLLDGQDVRDLDLNF 436 Query: 435 LRAQIGLVTQDTYLFNGTIRENLIYADPGASEDRIIAVCQAAYIHDFIMSLPEGYDTVVG 494 LR IG+V QDTYLFNGTIRENL YA+ A E+ +I VC+ A I+DFI +LP+G+DT+VG Sbjct: 437 LRQNIGMVAQDTYLFNGTIRENLHYANEHAQEEDLIRVCREANIYDFIRTLPDGFDTLVG 496 Query: 495 NRGVKLSGGEKQRISIARVLLKNPPVIIMDEATSSLDTASEYYIQQAMHTLLQGKTSIVI 554 NRG+KLSGGEKQR++IARVLLK+P V+IMDEATSSLD+ SE IQ+A+ +L+G+TS++I Sbjct: 497 NRGLKLSGGEKQRLAIARVLLKDPKVLIMDEATSSLDSLSESLIQEAIEPILKGRTSVII 556 Query: 555 AHRLSTIMAADQILVVQAGTIVEAGTHQSLLEQHGVYRDLYDKQYE 600 AHRLSTIMA + I+V+Q G IV+ GTH LL++ G+Y+ LY+ Q++ Sbjct: 557 AHRLSTIMAVNDIIVLQEGEIVQQGTHWELLKEDGLYKLLYETQFK 602 >B8FT96.1 B8FT96_DESHD ABC transporter related Length = 611 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 281/586 (47%), Positives = 381/586 (65%), Gaps = 3/586 (0%) Query: 17 DDDDKKTNLSKALLLRIAGYFFPYWKQTLLVMAVLIVSAVLGLLPPLFIQQIIDQALPDK 76 ++ K ++KA L RI Y PYW + LV A +I+S++LGLLPPL +IID L + Sbjct: 18 EEKQNKPKVTKAFLRRILSYLLPYWPRLALVFAAIILSSLLGLLPPLLSGRIIDDGLLGR 77 Query: 77 NFRXXXXXXXXXXXXXXXXGLLGVLQNYLNSFISLHIVYDMKNQMYRHLQKMQLQFYSGV 136 +F L+ VL+NYL ++++ HI+YDMKNQMY HLQ+M +F++ Sbjct: 78 DFPLLVQLILLSFIVLIIANLINVLENYLTTWVAQHIIYDMKNQMYDHLQQMSHRFFTNN 137 Query: 137 QQGEVITRMTSDISGVQGVFSSTVVNFASNLFILVSTAVTLFIMNWKLALLGIFVIPLFV 196 QG++ITRMT+DI+GVQ V T+ SN ILV+T L NW LAL+ + ++PLF+ Sbjct: 138 HQGDIITRMTTDINGVQSVVVGTLTRLVSNTIILVTTFAALVQKNWLLALISMIIVPLFI 197 Query: 197 VPTRKMGNLSWKLAKQTQEKISEQNQIIQETLSISGYLLMKLFTKESAEYTKFQTVNSEA 256 +PT ++GN W L QE+ NQ+ ETLS+SG LL+KLFT+ES EY KF+ +N E Sbjct: 198 LPTNQVGNRRWSLTMAKQEQTDASNQLFNETLSVSGQLLVKLFTRESKEYAKFEKINREI 257 Query: 257 TSLQIRQSMAGRWFMMVLSTFTSXXXXXXXXX--XXXXXXHGELSIGAIVAFVALLGRLY 314 T L IR+ + GRWF ++ TFT+ L++G I VALLGRLY Sbjct: 258 TRLSIREILVGRWFRVIFDTFTNMGPMIIYLAGGFLMIKMGSGLTVGDITVVVALLGRLY 317 Query: 315 GPVMQMTNLYVEIKRSAALFERIFDYFDMKPLIVDKPEARFISAAGRDITFHEVSFAYQA 374 PV + + V+I RS ALF RIF+YFD+ I + P+A I F VSF Y+ Sbjct: 318 LPVNVLLTIQVDIIRSLALFSRIFEYFDIPVEIKNSPQAIVPKECAGTIVFEHVSFHYEG 377 Query: 375 DKTALHGISFXXXXXXXXXXVGPSGAGKTTITNLIPRLYETDSGAITIGGSNIRDFTLES 434 K L I+ VGPSG GKTT+ NLIPRLY+ G + + G ++RD L Sbjct: 378 -KPVLKNINLTIEKGKSVAIVGPSGTGKTTLINLIPRLYDVTGGRVLLDGQDVRDLDLNF 436 Query: 435 LRAQIGLVTQDTYLFNGTIRENLIYADPGASEDRIIAVCQAAYIHDFIMSLPEGYDTVVG 494 LR IG+V QDTYLFNGTIRENL YA+ A E+ +I VC+ A I+DFI +LP+G+DT+VG Sbjct: 437 LRQNIGMVAQDTYLFNGTIRENLHYANEHAQEEDLIRVCREANIYDFIRTLPDGFDTLVG 496 Query: 495 NRGVKLSGGEKQRISIARVLLKNPPVIIMDEATSSLDTASEYYIQQAMHTLLQGKTSIVI 554 NRG+KLSGGEKQR++IARVLLK+P V+IMDEATSSLD+ SE IQ+A+ +L+G+TS++I Sbjct: 497 NRGLKLSGGEKQRLAIARVLLKDPKVLIMDEATSSLDSLSESLIQEAIEPILKGRTSVII 556 Query: 555 AHRLSTIMAADQILVVQAGTIVEAGTHQSLLEQHGVYRDLYDKQYE 600 AHRLSTIMA + I+V+Q G IV+ GTH LL++ G+Y+ LY+ Q++ Sbjct: 557 AHRLSTIMAVNDIIVLQEGEIVQQGTHWELLKEDGLYKLLYETQFK 602 >C4CFM6.1 C4CFM6_9ACTN ABC-type multidrug transport system, ATPase and permease component Length = 685 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 270/590 (45%), Positives = 372/590 (63%), Gaps = 5/590 (0%) Query: 16 FDDDDKKTN---LSKALLLRIAGYFFPYWKQTLLVMAVLIVSAVLGLLPPLFIQQIIDQA 72 F +++K N L+ L+ R+ YF PY + L++ +I S+VL LLP + +IID Sbjct: 16 FLTEEEKRNQPKLTWPLIKRVFSYFGPYKWRLALILVCIIASSVLSLLPTILTGKIIDDG 75 Query: 73 LPDKNFRXXXXXXXXXXXXXXXXGLLGVLQNYLNSFISLHIVYDMKNQMYRHLQKMQLQF 132 L +N L+GV ++YLNS++S HI YDM+N MYRHLQ M +F Sbjct: 76 LIGRNLAVLVQLILLSFGVTVVAQLIGVAESYLNSWVSQHIGYDMRNAMYRHLQTMSQRF 135 Query: 133 YSGVQQGEVITRMTSDISGVQGVFSSTVVNFASNLFILVSTAVTLFIMNWKLALLGIFVI 192 ++ QG++ITRMTSDI+G + V SS + + SN L+ V +F NW LAL+ I +I Sbjct: 136 FTTNNQGDIITRMTSDIAGAESVISSNLSSVLSNTITLIVAMVAMFSKNWILALVSIALI 195 Query: 193 PLFVVPTRKMGNLSWKLAKQTQEKISEQNQIIQETLSISGYLLMKLFTKESAEYTKFQTV 252 PLFV+PTR+ G + W L Q QE + N I+ ETLS+SG L+KLF E EY +++ Sbjct: 196 PLFVIPTRRAGRVRWNLTSQAQECNDQINGILNETLSVSGQTLVKLFGAEDREYERYEAA 255 Query: 253 NSEATSLQIRQSMAGRWFMMVLSTFTSXXXXXXXXX--XXXXXXHGELSIGAIVAFVALL 310 N + L I++SMAGRWF + + T +S L++G I V LL Sbjct: 256 NKKMIGLNIKESMAGRWFFVTMHTISSVGPMLLYLGGGILMMRYDSSLTVGDITVMVTLL 315 Query: 311 GRLYGPVMQMTNLYVEIKRSAALFERIFDYFDMKPLIVDKPEARFISAAGRDITFHEVSF 370 GR+YGPV + N+ V RS A+F RIF+YFDMKP + + P+A A + F V F Sbjct: 316 GRMYGPVNSLLNIQVNWVRSMAMFTRIFEYFDMKPEVENAPDAIVPDHAEGSVAFEHVDF 375 Query: 371 AYQADKTALHGISFXXXXXXXXXXVGPSGAGKTTITNLIPRLYETDSGAITIGGSNIRDF 430 AY ++ LH +SF VGPSG+GK+TI NLIPRLY+ +G++ G ++R Sbjct: 376 AYDPERQILHDVSFTLDKGKSIALVGPSGSGKSTIVNLIPRLYDVAAGSVKFDGVDVRQL 435 Query: 431 TLESLRAQIGLVTQDTYLFNGTIRENLIYADPGASEDRIIAVCQAAYIHDFIMSLPEGYD 490 L LRA +G+VTQ+TYLFNGTIR+NL+Y P A+E+ ++ VC A I +FI G D Sbjct: 436 DLHFLRANVGVVTQETYLFNGTIRDNLLYVKPDATEEELLEVCDKANILEFIQRQEHGLD 495 Query: 491 TVVGNRGVKLSGGEKQRISIARVLLKNPPVIIMDEATSSLDTASEYYIQQAMHTLLQGKT 550 T+VGNRG+KLSGGEKQRISIARVLLK+P ++I DEATS+LD+ SE IQ A+++L+Q T Sbjct: 496 TMVGNRGLKLSGGEKQRISIARVLLKDPALLIFDEATSALDSISEAKIQDAINSLVQTHT 555 Query: 551 SIVIAHRLSTIMAADQILVVQAGTIVEAGTHQSLLEQHGVYRDLYDKQYE 600 SI+IAHRLSTI+AAD+ILV++ G +VE G H L++ GVY LYD Q++ Sbjct: 556 SILIAHRLSTILAADEILVIKDGHVVERGQHADLVKTGGVYSQLYDTQFK 605 >C4CKG4.1 C4CKG4_9CHLR ABC-type multidrug transport system, ATPase and permease component Length = 628 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 261/604 (43%), Positives = 377/604 (62%), Gaps = 16/604 (2%) Query: 11 HGRLKFDDDDKKTNLSKALLLRIAGYFFPYWKQTLLVMAVLIVSAVLGLLPPLFIQQIID 70 GRL D + R+ +F PYW+Q LV+ +++++ LGL+ P ++ IID Sbjct: 3 RGRLMGQFDKPEQTARPGTFRRVVAFFRPYWQQIALVLVAILITSGLGLINPYLLKLIID 62 Query: 71 QALPDKNFRXXXXXXXXXXXXXXXXGLLGVLQNYLNSFISLHIVYDMKNQMYRHLQKMQL 130 A+P ++ GL+GV Q+YL++ + ++ D++N +Y HLQ+M L Sbjct: 63 TAIPQRDMALLNLFVGLMIVVPIISGLIGVGQSYLSNVVGQRVMRDLRNALYAHLQRMPL 122 Query: 131 QFYSGVQQGEVITRMTSDISGVQGVFSSTVVNFASNLFILVSTAVTLFIMNWKLALLGIF 190 +F++ + GE+ +R+ +D+ G+Q V +ST SN+ + ST V + ++ +L LL + Sbjct: 123 RFFTSTRTGEIQSRLANDVGGIQQVVTSTAATIVSNIATVGSTIVLMAAIDVQLTLLSLA 182 Query: 191 VIPLFVVPTRKMGNLSWKLAKQTQEKISEQNQIIQETLSISGYLLMKLFTKESAEYTKFQ 250 + P+F+V TR++G L +L+ TQ +++ I QETLS+SG LL K F ++ +F Sbjct: 183 LAPIFLVVTRRVGALRRELSTSTQRSLADLTAITQETLSVSGVLLTKTFGRQREATERFA 242 Query: 251 TVNSEATSLQIRQSMAGRWFMMVLSTFTSXXXXXXXXXXXXXXXHG--ELSIGAIVAFVA 308 T N LQIRQ M GRWF MV++ F S G EL+IG+IVAF Sbjct: 243 TENERLAGLQIRQQMIGRWFFMVINVFFSITPGLVYWVAGRSIIGGDTELTIGSIVAFTT 302 Query: 309 LLGRLYGPVMQMTNLYVEIKRSAALFERIFDYFDMKPLIVDKPEARFIS---AAGRDITF 365 L RL+ P+ Q+ N++V+++ + ALF+RIF+Y D++P I D+P A + GR + + Sbjct: 303 LQSRLFFPLGQLLNVHVDVQGALALFDRIFEYLDLQPEITDRPGALALDPDRVRGR-VEY 361 Query: 366 HEVSFAYQADKT----------ALHGISFXXXXXXXXXXVGPSGAGKTTITNLIPRLYET 415 VSF Y + AL+ ++F VGPSGAGKTTIT L+PRLY+ Sbjct: 362 DHVSFRYDSAPPGSDGATERPLALNDVTFTIEPGQLVALVGPSGAGKTTITYLLPRLYDV 421 Query: 416 DSGAITIGGSNIRDFTLESLRAQIGLVTQDTYLFNGTIRENLIYADPGASEDRIIAVCQA 475 SGA+ I G ++RD TLESL IG VTQ+TYLF+ T+RENL+Y P A+++ I A +A Sbjct: 422 TSGAVRIDGHDVRDVTLESLGRIIGFVTQETYLFHATVRENLLYGKPDATQEEIEAAARA 481 Query: 476 AYIHDFIMSLPEGYDTVVGNRGVKLSGGEKQRISIARVLLKNPPVIIMDEATSSLDTASE 535 A IHD IM LP+GYDTVVG RG KLSGGEKQR+++ARV+LKNP ++I+DEATS+LDT SE Sbjct: 482 AAIHDRIMELPDGYDTVVGERGYKLSGGEKQRLALARVILKNPRILILDEATSALDTHSE 541 Query: 536 YYIQQAMHTLLQGKTSIVIAHRLSTIMAADQILVVQAGTIVEAGTHQSLLEQHGVYRDLY 595 IQ A+ L++G+T+I IAHRLST++AADQILVV G IVE GTHQ LL + G+Y LY Sbjct: 542 RLIQAALQPLMRGRTTIAIAHRLSTVLAADQILVVDQGRIVERGTHQELLARDGLYASLY 601 Query: 596 DKQY 599 Q+ Sbjct: 602 RAQF 605 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,030,594,293 Number of extensions: 110058080 Number of successful extensions: 599962 Number of sequences better than 1.0e-05: 69979 Number of HSP's gapped: 537689 Number of HSP's successfully gapped: 74166 Length of query: 605 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 463 Effective length of database: 1,722,912,073 Effective search space: 797708289799 Effective search space used: 797708289799 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)